RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 GUCA2BQ16661 112 aa0.78□□□□□ -2.28
FOXN3-216ENST00000557496 C12orf60Q5U649 245 aa0.78□□□□□ -2.28
FOXN3-216ENST00000557496 ATL3Q6DD88 541 aa0.78□□□□□ -2.28
FOXN3-216ENST00000557496 TAF8Q7Z7C8 310 aa0.78□□□□□ -2.28
FOXN3-216ENST00000557496 TPRA1Q86W33 373 aa0.78□□□□□ -2.28
FOXN3-216ENST00000557496 TMEM17Q86X19 198 aa0.78□□□□□ -2.28
FOXN3-216ENST00000557496 BATF2Q8N1L9 274 aa0.78□□□□□ -2.28
FOXN3-216ENST00000557496 C10orf53Q8N6V4 93 aa0.78□□□□□ -2.28
FOXN3-216ENST00000557496 KIR3DL3Q8N743 410 aa0.78□□□□□ -2.28
FOXN3-216ENST00000557496 LRRC58Q96CX6 371 aa0.78□□□□□ -2.28
FOXN3-216ENST00000557496 KLF6Q99612 283 aaPredicted RBP0.78□□□□□ -2.28
FOXN3-216ENST00000557496 TEKT3Q9BXF9 490 aa0.78□□□□□ -2.28
FOXN3-216ENST00000557496 ZFP14Q9HCL3 533 aa0.78□□□□□ -2.28
FOXN3-216ENST00000557496 ANO10Q9NW15 660 aa0.78□□□□□ -2.28
FOXN3-216ENST00000557496 ZNRD1Q9P1U0 126 aa0.78□□□□□ -2.28
FOXN3-216ENST00000557496 CLSPNQ9HAW4 1339 aa0.78□□□□□ -2.28
FOXN3-216ENST00000557496 SDK2Q58EX2 2172 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 A0A1B0GW55 424 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 ZNF850A8MQ14 1090 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 J3QKU1 62 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 FOXE1O00358 373 aaPredicted RBP0.77□□□□□ -2.29
FOXN3-216ENST00000557496 ZNF207O43670 478 aaKnown RBP0.77□□□□□ -2.29
FOXN3-216ENST00000557496 CCNKO75909 580 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 B3GAT3O94766 335 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 STAMBPO95630 424 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 HMOX1P09601 288 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 DUX4L2P0CJ85 424 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 DUX4L3P0CJ86 424 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 DUX4L5P0CJ88 424 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 DUX4L6P0CJ89 424 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 DUX4L7P0CJ90 424 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 HPGDP15428 266 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 CNR1P21554 472 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 FGF9P31371 208 aaPredicted RBP0.77□□□□□ -2.29
FOXN3-216ENST00000557496 ARF5P84085 180 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 MEF2CQ06413 473 aaPredicted RBP0.77□□□□□ -2.29
FOXN3-216ENST00000557496 CYTH1Q15438 398 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 BCL7AQ4VC05 210 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 DUX4L9Q6RFH8 374 aaPredicted RBP0.77□□□□□ -2.29
FOXN3-216ENST00000557496 CBLN3Q6UW01 205 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 MIER3Q7Z3K6 550 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 ZNF573Q86YE8 665 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 RIMKLAQ8IXN7 391 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 CCDC170Q8IYT3 715 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 MIR7-3HGQ8N6C7 128 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 NKAIN3Q8N8D7 197 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 MINDY2Q8NBR6 621 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 CCNYQ8ND76 341 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 PNPT1Q8TCS8 783 aaKnown RBP0.77□□□□□ -2.29
FOXN3-216ENST00000557496 MRPS31Q92665 395 aaKnown RBP0.77□□□□□ -2.29
FOXN3-216ENST00000557496 DNAJC19Q96DA6 116 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 TVP23CQ96ET8 276 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 RNF157Q96PX1 679 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 RHOJQ9H4E5 214 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 RDH8Q9NYR8 311 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 DUX4Q9UBX2 424 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 ADGRL1O94910 1474 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 PCNX2A6NKB5 2137 aa0.77□□□□□ -2.29
FOXN3-216ENST00000557496 PTPRTO14522 1441 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 PRSS37A4D1T9 235 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 ANXA13P27216 316 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 HSPA1LP34931 641 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 RFC4P35249 363 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 CDC20Q12834 499 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 PARP15Q460N3 678 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 LINC01620Q4KN68 170 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 VAX1Q5SQQ9 334 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 WDR88Q6ZMY6 472 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 NTM-AS1Q6ZSK4 140 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 NECAP1Q8NC96 275 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 OR52E1Q8NGJ3 308 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 OR5L2Q8NGL0 311 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 OR2G3Q8NGZ4 309 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 SNX21Q969T3 373 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 PINX1Q96BK5 328 aaKnown RBP0.76□□□□□ -2.29
FOXN3-216ENST00000557496 L3HYPDHQ96EM0 354 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 PELI1Q96FA3 418 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 TESK2Q96S53 571 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 SLC6A7Q99884 636 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 RNF5Q99942 180 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 SULT4A1Q9BR01 284 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 SLC35A5Q9BS91 424 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 DESI2Q9BSY9 194 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 CHAC1Q9BUX1 264 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 POLR1EQ9GZS1 481 aaKnown RBP0.76□□□□□ -2.29
FOXN3-216ENST00000557496 RHBGQ9H310 441 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 SLCO1B3Q9NPD5 702 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 CTPS2Q9NRF8 586 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 AGPAT5Q9NUQ2 364 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 ATP6V1HQ9UI12 483 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 FOXJ3Q9UPW0 622 aa0.76□□□□□ -2.29
FOXN3-216ENST00000557496 TET2Q6N021 2002 aaPredicted RBP0.76□□□□□ -2.29
FOXN3-216ENST00000557496 CUX2O14529 1486 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 NFASCO94856 1347 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 A0A1B0GUS0 222 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 OLFM2O95897 454 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 CA1P00915 261 aaPredicted RBP0.75□□□□□ -2.29
FOXN3-216ENST00000557496 BGLAPP02818 100 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 LGALS2P05162 132 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 HSP90AA1P07900 732 aaKnown RBP0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms