RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 RLIMQ9NVW2 624 aa14.26□□□□□ -0.13
DDX55-212ENST00000544738 LPAR3Q9UBY5 353 aa14.26□□□□□ -0.13
DDX55-212ENST00000544738 MAGED1Q9Y5V3 778 aaPredicted RBP14.26□□□□□ -0.13
DDX55-212ENST00000544738 FLVCR1Q9Y5Y0 555 aa14.26□□□□□ -0.13
DDX55-212ENST00000544738 A0A096LPI6 279 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 POLR3GO15318 223 aaPredicted RBP14.25□□□□□ -0.13
DDX55-212ENST00000544738 RAMP1O60894 148 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 RAD51DO75771 328 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 IGHV3-9P01782 118 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 GKN3PP0CG01 181 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 THBS2P35442 1172 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 ACAA2P42765 397 aaKnown RBP14.25□□□□□ -0.13
DDX55-212ENST00000544738 MRPL19P49406 292 aaKnown RBP14.25□□□□□ -0.13
DDX55-212ENST00000544738 FADDQ13158 208 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 SLC17A1Q14916 467 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 RGNQ15493 299 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 TMEM249Q2WGJ8 235 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 GTDC1Q4AE62 458 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 PRAMEF8Q5VWM4 474 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 PRAMEF7Q5VXH5 474 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 KLHL17Q6TDP4 642 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 TMEM108Q6UXF1 575 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 CASP12Q6UXS9 341 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 DNM1P46Q6ZS02 220 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 ATG4DQ86TL0 474 aaPredicted RBP14.25□□□□□ -0.13
DDX55-212ENST00000544738 LRRC8CQ8TDW0 803 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 AURKBQ96GD4 344 aaPredicted RBP14.25□□□□□ -0.13
DDX55-212ENST00000544738 TMEM19Q96HH6 336 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 SF3B5Q9BWJ5 86 aaKnown RBP14.25□□□□□ -0.13
DDX55-212ENST00000544738 SPATA9Q9BWV2 254 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 GRIP2Q9C0E4 1043 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 TCF7L2Q9NQB0 619 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 UPB1Q9UBR1 384 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 GDF2Q9UK05 429 aaPredicted RBP14.25□□□□□ -0.13
DDX55-212ENST00000544738 MGAT4BQ9UQ53 548 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 ZNF443Q9Y2A4 671 aaPredicted RBP14.25□□□□□ -0.13
DDX55-212ENST00000544738 PCDHB14Q9Y5E9 798 aa14.25□□□□□ -0.13
DDX55-212ENST00000544738 IGHV4-30-2A0A087WSY4 118 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 ZC3H12DA2A288 527 aaKnown RBP14.24□□□□□ -0.13
DDX55-212ENST00000544738 LIPT2A6NK58 231 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 A8MVM7 634 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 CLIC1O00299 241 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 KCNAB3O43448 404 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 SSX4O60224 188 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 SRD5A1P18405 259 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 NCF2P19878 526 aaPredicted RBP14.24□□□□□ -0.13
DDX55-212ENST00000544738 PTAFRP25105 342 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 NTF4P34130 210 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 TGFBR3Q03167 851 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 OTUD3Q5T2D3 398 aaPredicted RBP14.24□□□□□ -0.13
DDX55-212ENST00000544738 CADM2Q8N3J6 435 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 ARIH2OSQ8N7S6 290 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 GOLGA6L1Q8N7Z2 621 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 KBTBD8Q8NFY9 601 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 NEUROG1Q92886 237 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 SLC35B4Q969S0 331 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 MUS81Q96NY9 551 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 TAPBPLQ9BX59 468 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 PAIP1Q9H074 479 aaKnown RBP14.24□□□□□ -0.13
DDX55-212ENST00000544738 ALG2Q9H553 416 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 BCL2L10Q9HD36 194 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 CISD1Q9NZ45 108 aaKnown RBP14.24□□□□□ -0.13
DDX55-212ENST00000544738 DCTN4Q9UJW0 460 aa14.24□□□□□ -0.13
DDX55-212ENST00000544738 SHISA9B4DS77 424 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 C5orf58C9J3I9 102 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 ABCD4O14678 606 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 VAMP5O95183 116 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 BMP2P12643 396 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 IRX1P78414 480 aaPredicted RBP14.23□□□□□ -0.13
DDX55-212ENST00000544738 CEACAM7Q14002 265 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 OR7A5Q15622 319 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 GABRA6Q16445 453 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 ZNF311Q5JNZ3 666 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 RPS26P11Q5JNZ5 115 aaPredicted RBP14.23□□□□□ -0.13
DDX55-212ENST00000544738 TMEM225Q6GV28 225 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 SLC2A7Q6PXP3 512 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 CLIP4Q8N3C7 705 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 C17orf78Q8N4C9 275 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 C1orf162Q8NEQ5 155 aaPredicted RBP14.23□□□□□ -0.13
DDX55-212ENST00000544738 OR52N5Q8NH56 324 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 BBS10Q8TAM1 723 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 TMEM45BQ96B21 275 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 ATP6V1G3Q96LB4 118 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 TNFRSF13CQ96RJ3 184 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 CCDC28BQ9BUN5 200 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 A4GALTQ9NPC4 353 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 TMEM45AQ9NWC5 275 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 TMEM160Q9NX00 188 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 NPAP1Q9NZP6 1156 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 SLC25A15Q9Y619 301 aa14.23□□□□□ -0.13
DDX55-212ENST00000544738 AQP7P3A6NL99 342 aa14.22□□□□□ -0.13
DDX55-212ENST00000544738 PDLIM1O00151 329 aa14.22□□□□□ -0.13
DDX55-212ENST00000544738 AKR7A3O95154 331 aa14.22□□□□□ -0.13
DDX55-212ENST00000544738 PPIBP23284 216 aaKnown RBP14.22□□□□□ -0.13
DDX55-212ENST00000544738 IDH3AP50213 366 aa14.22□□□□□ -0.13
DDX55-212ENST00000544738 CDH11P55287 796 aa14.22□□□□□ -0.13
DDX55-212ENST00000544738 PGGHGQ32M88 737 aa14.22□□□□□ -0.13
DDX55-212ENST00000544738 LIPNQ5VXI9 398 aa14.22□□□□□ -0.13
DDX55-212ENST00000544738 BLOC1S3Q6QNY0 202 aa14.22□□□□□ -0.13
DDX55-212ENST00000544738 IL17RELQ6ZVW7 336 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms