RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 CLDND2Q8NHS1 167 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 COQ8BQ96D53 544 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 ZNF385AQ96PM9 386 aaKnown RBP13.92□□□□□ -0.18
DDX56-210ENST00000479440 LRRC37BQ96QE4 947 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 SUCNR1Q9BXA5 334 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 TPK1Q9H3S4 243 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 HEATR1Q9H583 2144 aaKnown RBP13.92□□□□□ -0.18
DDX56-210ENST00000479440 ZNF696Q9H7X3 374 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 LPAR2Q9HBW0 351 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.92□□□□□ -0.18
DDX56-210ENST00000479440 MID2Q9UJV3 735 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 SH3PXD2BA1X283 911 aa13.91□□□□□ -0.18
DDX56-210ENST00000479440 PLIN3O60664 434 aa13.91□□□□□ -0.18
DDX56-210ENST00000479440 BCAS1O75363 584 aaPredicted RBP13.91□□□□□ -0.18
DDX56-210ENST00000479440 PNPP00491 289 aa13.91□□□□□ -0.18
DDX56-210ENST00000479440 GPIP06744 558 aa13.91□□□□□ -0.18
DDX56-210ENST00000479440 UQCRBP14927 111 aa13.91□□□□□ -0.18
DDX56-210ENST00000479440 CPA3P15088 417 aa13.91□□□□□ -0.18
DDX56-210ENST00000479440 PRPS1L1P21108 318 aa13.91□□□□□ -0.18
DDX56-210ENST00000479440 TUBA1BP68363 451 aa13.91□□□□□ -0.18
DDX56-210ENST00000479440 TUBA4AP68366 448 aa13.91□□□□□ -0.18
DDX56-210ENST00000479440 REP15Q6BDI9 236 aa13.91□□□□□ -0.18
DDX56-210ENST00000479440 TYW3Q6IPR3 259 aaKnown RBP13.91□□□□□ -0.18
DDX56-210ENST00000479440 SYT10Q6XYQ8 523 aa13.91□□□□□ -0.18
DDX56-210ENST00000479440 TUBA1AQ71U36 451 aa13.91□□□□□ -0.18
DDX56-210ENST00000479440 C6orf120Q7Z4R8 191 aa13.91□□□□□ -0.18
DDX56-210ENST00000479440 MZB1Q8WU39 189 aa13.91□□□□□ -0.18
DDX56-210ENST00000479440 BCL2L2Q92843 193 aaPredicted RBP13.91□□□□□ -0.18
DDX56-210ENST00000479440 DUSP26Q9BV47 211 aa13.91□□□□□ -0.18
DDX56-210ENST00000479440 OR51I1Q9H343 314 aa13.91□□□□□ -0.18
DDX56-210ENST00000479440 SEC61A2Q9H9S3 476 aa13.91□□□□□ -0.18
DDX56-210ENST00000479440 TBK1Q9UHD2 729 aa13.91□□□□□ -0.18
DDX56-210ENST00000479440 OSGIN1Q9UJX0 560 aa13.91□□□□□ -0.18
DDX56-210ENST00000479440 TRAV20A0A0B4J274 112 aa13.9□□□□□ -0.18
DDX56-210ENST00000479440 AQP7P3A6NL99 342 aa13.9□□□□□ -0.18
DDX56-210ENST00000479440 PIP5K1BO14986 540 aa13.9□□□□□ -0.18
DDX56-210ENST00000479440 AKR7A3O95154 331 aa13.9□□□□□ -0.18
DDX56-210ENST00000479440 ADRA2AP08913 450 aa13.9□□□□□ -0.18
DDX56-210ENST00000479440 ETF1P62495 437 aaKnown RBP13.9□□□□□ -0.18
DDX56-210ENST00000479440 KCNJ10P78508 379 aa13.9□□□□□ -0.18
DDX56-210ENST00000479440 HGFACQ04756 655 aa13.9□□□□□ -0.18
DDX56-210ENST00000479440 SLC9B1Q4ZJI4 515 aa13.9□□□□□ -0.18
DDX56-210ENST00000479440 ATP6AP1LQ52LC2 224 aa13.9□□□□□ -0.18
DDX56-210ENST00000479440 SHISA2Q6UWI4 295 aa13.9□□□□□ -0.18
DDX56-210ENST00000479440 TMEM99Q8N816 258 aa13.9□□□□□ -0.18
DDX56-210ENST00000479440 ZIC4Q8N9L1 334 aa13.9□□□□□ -0.18
DDX56-210ENST00000479440 MIPOL1Q8TD10 442 aa13.9□□□□□ -0.18
DDX56-210ENST00000479440 C1orf50Q9BV19 199 aa13.9□□□□□ -0.18
DDX56-210ENST00000479440 NARFLQ9H6Q4 476 aa13.9□□□□□ -0.18
DDX56-210ENST00000479440 CMAHPQ9Y471 501 aa13.9□□□□□ -0.18
DDX56-210ENST00000479440 TENM1Q9UKZ4 2725 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 A0A096LPE4 126 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 IGHV2OR16-5A0A0B4J2B6 119 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 A0A1W2PPZ6 126 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 TMEM129A0AVI4 362 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 LYNX1G3V0Z9 82 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 M0R233 179 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 NR5A2O00482 541 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 TMPRSS2O15393 492 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 RIPK2O43353 540 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 PEX11AO75192 247 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 LYNX1P0DP58 116 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 GAAP10253 952 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 ACHEP22303 614 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 TACR3P29371 465 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 CCT5P48643 541 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 SELENOPP49908 381 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 SNTB2Q13425 540 aaKnown RBP13.89□□□□□ -0.19
DDX56-210ENST00000479440 CEACAM7Q14002 265 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 DAG1Q14118 895 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 OR7A5Q15622 319 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 NIPAL3Q6P499 406 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 FRRS1Q6ZNA5 592 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 TRMT10CQ7L0Y3 403 aaKnown RBP13.89□□□□□ -0.19
DDX56-210ENST00000479440 CMIPQ8IY22 773 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 FNDC5Q8NAU1 212 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 ROPN1LQ96C74 230 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 TAPBPLQ9BX59 468 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 GIMAP2Q9UG22 337 aa13.89□□□□□ -0.19
DDX56-210ENST00000479440 ZC3H12DA2A288 527 aaKnown RBP13.88□□□□□ -0.19
DDX56-210ENST00000479440 LIPT2A6NK58 231 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 FAAHO00519 579 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 AP3D1O14617 1153 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 SYNGR3O43761 229 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 SCN2BO60939 215 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 VAMP5O95183 116 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 IGFBP1P08833 259 aaPredicted RBP13.88□□□□□ -0.19
DDX56-210ENST00000479440 OR12D1P0DN82 309 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 CBR1P16152 277 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 ARR3P36575 388 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 EVX1P49640 407 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 PLAURQ03405 335 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 NPRL3Q12980 569 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 XKR7Q5GH72 579 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 AP1ARQ63HQ0 302 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 TMEM225Q6GV28 225 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 FAHD2BQ6P2I3 314 aaPredicted RBP13.88□□□□□ -0.19
DDX56-210ENST00000479440 KRTCAP2Q8N6L1 136 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 IL17RDQ8NFM7 739 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 OR4A15Q8NGL6 344 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 1326 ms