RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 CPNE5Q9HCH3 593 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 SLC6A20Q9NP91 592 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 FAM212BQ9NTI7 297 aaPredicted RBP5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 SUSD2Q9UGT4 822 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 CBLCQ9ULV8 474 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 NOSIPQ9Y314 301 aaKnown RBP5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 NKX6-3A6NJ46 265 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 OR2J3O76001 311 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 KCNK2O95069 426 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 GRPP07492 148 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 HNRNPA2B1P22626 353 aaKnown RBP5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 LAP3P28838 519 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 SNCAP37840 140 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 VASPP50552 380 aaPredicted RBP5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 CARD18P57730 90 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 MAT1AQ00266 395 aaKnown RBP5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 EDDM3AQ14507 147 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 CDKN3Q16667 212 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 GLYR1Q49A26 553 aaPredicted RBP5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 SLC35G3Q8N808 338 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 CDRT4Q8N9R6 151 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 OR5D18Q8NGL1 313 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 OR8U1Q8NH10 309 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 FOXJ1Q92949 421 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 VPS25Q9BRG1 176 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 C12orf49Q9H741 205 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 LMAN1LQ9HAT1 526 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 SIX4Q9UIU6 781 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 DNAJC15Q9Y5T4 150 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 PPLO60437 1756 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 A0A0D9SG52 128 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 METTL15A6NJ78 407 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 RNASET2O00584 256 aaKnown RBP5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 CACNG3O60359 315 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 PSMB3P49720 205 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 FOXA1P55317 472 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 TGFBR3Q03167 851 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 MEP1BQ16820 701 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 BCL7AQ4VC05 210 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 OR8G2PQ6IF36 304 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 RFPL4BQ6ZWI9 263 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 ENTHD1Q8IYW4 607 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 OR52E1Q8NGJ3 308 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 DVL3Q92997 716 aaPredicted RBP5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 ULBP3Q9BZM4 244 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 ARHGAP39Q9C0H5 1083 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 MKRN2Q9H000 416 aaKnown RBP5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 PARP12Q9H0J9 701 aaKnown RBP5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 CD207Q9UJ71 328 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 TMEM59LQ9UK28 342 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 BCL9LQ86UU0 1499 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 TMEM82A0PJX8 343 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 RAB19A4D1S5 217 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 ZNF840PA6NDX5 716 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 K7EQM0 130 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 HS3ST1O14792 307 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 OLFM2O95897 454 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 DHRS4L1P0CG22 281 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 SNRPBP14678 240 aaKnown RBP5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 CSF2RAP15509 400 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 HOXD12P35452 270 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 LGALS4P56470 323 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 PHLDA2Q53GA4 152 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 WBP2NLQ6ICG8 309 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 USP51Q70EK9 711 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 SLC35D2Q76EJ3 337 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 ACVR1CQ8NER5 493 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 RAB3CQ96E17 227 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 TVP23CQ96ET8 276 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 PGAP3Q96FM1 320 aaPredicted RBP5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 PAAF1Q9BRP4 392 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 LMF2Q9BU23 707 aaKnown RBP5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 LIN7BQ9HAP6 207 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 SLC35D1Q9NTN3 355 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 HHLA2Q9UM44 414 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 ZNF281Q9Y2X9 895 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 Q9Y3F1 56 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 ARHGEF28Q8N1W1 1705 aaKnown RBP5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 NSG1A0A0A6YYJ2 146 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 ATP6V1G2-DDX39BF2Z307 99 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 PRAMEF4O60810 478 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 CDK4P11802 303 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 CD46P15529 392 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 MAKP20794 623 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 UBE2IP63279 158 aaKnown RBP5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 HBG1P69891 147 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 HBG2P69892 147 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 DBPQ10586 325 aaPredicted RBP5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 HMGN3Q15651 99 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 TATDN3Q17R31 274 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 Q1RN00 199 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 ZNF691Q5VV52 312 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 SSX7Q7RTT5 188 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 LACC1Q8IV20 430 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 ADGRG5Q8IZF4 528 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 UBAC2Q8NBM4 344 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 PXT1Q8NFP0 134 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 OR13C2Q8NGS9 318 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 NEIL2Q969S2 332 aa5.3□□□□□ -1.56
GAPVD1-206ENST00000394104 HRASLS5Q96KN8 279 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms