RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 EUG1P32474 517 aa1.99□□□□□ -2.09
snR48snR48 LYP1P32487 611 aa1.99□□□□□ -2.09
snR48snR48 RPD3P32561 433 aa1.99□□□□□ -2.09
snR48snR48 YAT2P40017 923 aa1.99□□□□□ -2.09
snR48snR48 BAP3P41815 604 aa1.99□□□□□ -2.09
snR48snR48 NRG1Q03125 231 aa1.99□□□□□ -2.09
snR48snR48 NUP53Q03790 475 aa1.99□□□□□ -2.09
snR48snR48 RLF2Q12495 606 aa1.99□□□□□ -2.09
snR48snR48 INO1P11986 533 aa1.98□□□□□ -2.09
snR48snR48 PPX1P38698 397 aa1.98□□□□□ -2.09
snR48snR48 TAX4P47030 604 aa1.98□□□□□ -2.09
snR48snR48 SRP1Q02821 542 aaKnown RBP1.98□□□□□ -2.09
snR48snR48 VPS30Q02948 557 aa1.98□□□□□ -2.09
snR48snR48 PKH1Q03407 766 aa1.98□□□□□ -2.09
snR48snR48 HFD1Q04458 532 aa1.98□□□□□ -2.09
snR48snR48 CYC8P14922 966 aa1.97□□□□□ -2.09
snR48snR48 CDC48P25694 835 aaKnown RBP1.97□□□□□ -2.09
snR48snR48 YKL107WP34251 309 aa1.97□□□□□ -2.09
snR48snR48 REV7P38927 245 aa1.97□□□□□ -2.09
snR48snR48 SCW4P53334 386 aaKnown RBP1.97□□□□□ -2.09
snR48snR48 ATG4P53867 494 aa1.97□□□□□ -2.09
snR48snR48 RTT10Q08924 1013 aa1.97□□□□□ -2.09
snR48snR48 WHI5Q12416 295 aa1.97□□□□□ -2.09
snR48snR48 TRP2P00899 507 aaKnown RBP1.96□□□□□ -2.1
snR48snR48 RPA135P22138 1203 aaKnown RBP1.96□□□□□ -2.1
snR48snR48 SPC97P38863 823 aa1.96□□□□□ -2.1
snR48snR48 RPS26AP39938 119 aaKnown RBP1.96□□□□□ -2.1
snR48snR48 RPS26BP39939 119 aaKnown RBP1.96□□□□□ -2.1
snR48snR48 TGL5Q12043 749 aa1.96□□□□□ -2.1
snR48snR48 YKL033W-AQ86ZR7 236 aa1.96□□□□□ -2.1
snR48snR48 ADE5,7P07244 802 aaKnown RBP1.95□□□□□ -2.1
snR48snR48 CCR4P31384 837 aaKnown RBP1.95□□□□□ -2.1
snR48snR48 NGG1P32494 702 aa1.95□□□□□ -2.1
snR48snR48 TYE7P33122 291 aaPredicted RBP1.95□□□□□ -2.1
snR48snR48 MOT2P34909 587 aaKnown RBP1.95□□□□□ -2.1
snR48snR48 ASK1P35734 292 aa1.95□□□□□ -2.1
snR48snR48 DUN1P39009 513 aa1.95□□□□□ -2.1
snR48snR48 MSC6Q08818 692 aaKnown RBP1.95□□□□□ -2.1
snR48snR48 TMA46Q12000 345 aaKnown RBP1.95□□□□□ -2.1
snR48snR48 YLR415CO13578 112 aa1.94□□□□□ -2.1
snR48snR48 HOT13P36078 116 aa1.94□□□□□ -2.1
snR48snR48 SAP190P36123 1033 aa1.94□□□□□ -2.1
snR48snR48 YKR011CQ02209 353 aa1.94□□□□□ -2.1
snR48snR48 SAT4P25333 603 aaKnown RBP1.93□□□□□ -2.1
snR48snR48 YMC1P32331 307 aa1.93□□□□□ -2.1
snR48snR48 STM1P39015 273 aaKnown RBP1.93□□□□□ -2.1
snR48snR48 PCI8P40512 444 aa1.93□□□□□ -2.1
snR48snR48 FHN1P53279 174 aa1.93□□□□□ -2.1
snR48snR48 PHO2P07269 559 aa1.92□□□□□ -2.1
snR48snR48 UGP1P32861 499 aaKnown RBP1.92□□□□□ -2.1
snR48snR48 MUS81Q04149 632 aaPredicted RBP1.92□□□□□ -2.1
snR48snR48 MCM2P29469 868 aa1.91□□□□□ -2.1
snR48snR48 SIC1P38634 284 aa1.91□□□□□ -2.1
snR48snR48 HDA1P53973 706 aa1.91□□□□□ -2.1
snR48snR48 SSF1P38789 453 aaPredicted RBP1.9□□□□□ -2.11
snR48snR48 CCT3P39077 534 aaKnown RBP1.9□□□□□ -2.11
snR48snR48 SNF7P39929 240 aaKnown RBP1.9□□□□□ -2.11
snR48snR48 PAN2P53010 1115 aaPredicted RBP1.9□□□□□ -2.11
snR48snR48 CLN2P20438 545 aa1.89□□□□□ -2.11
snR48snR48 FUB1P25659 250 aa1.89□□□□□ -2.11
snR48snR48 IPL1P38991 367 aa1.89□□□□□ -2.11
snR48snR48 TYW3P53177 273 aa1.89□□□□□ -2.11
snR48snR48 NPP1P25353 742 aa1.88□□□□□ -2.11
snR48snR48 SEC20P28791 383 aa1.88□□□□□ -2.11
snR48snR48 GMH1P36125 273 aa1.88□□□□□ -2.11
snR48snR48 YMC2P38087 329 aa1.88□□□□□ -2.11
snR48snR48 EEB1Q02891 456 aa1.88□□□□□ -2.11
snR48snR48 SPR28Q04921 423 aa1.88□□□□□ -2.11
snR48snR48 ORM2Q06144 216 aa1.88□□□□□ -2.11
snR48snR48 ULA1Q12059 462 aa1.88□□□□□ -2.11
snR48snR48 STE12P13574 688 aa1.87□□□□□ -2.11
snR48snR48 PIN4P34217 668 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
snR48snR48 MGE1P38523 228 aa1.87□□□□□ -2.11
snR48snR48 PZF1P39933 429 aa1.87□□□□□ -2.11
snR48snR48 YLR225CQ05948 407 aaKnown RBP1.87□□□□□ -2.11
snR48snR48 DUT1P33317 147 aa1.86□□□□□ -2.11
snR48snR48 SFB3P38810 929 aa1.86□□□□□ -2.11
snR48snR48 MIT1P40002 666 aa1.86□□□□□ -2.11
snR48snR48 MNT3P40549 630 aa1.86□□□□□ -2.11
snR48snR48 PFA3P42836 336 aa1.86□□□□□ -2.11
snR48snR48 DUS3Q06053 668 aaKnown RBP1.86□□□□□ -2.11
snR48snR48 KCC4P25389 1037 aa1.85□□□□□ -2.11
snR48snR48 AFR1P33304 620 aa1.85□□□□□ -2.11
snR48snR48 PHO11P35842 467 aa1.85□□□□□ -2.11
snR48snR48 PHO12P38693 467 aa1.85□□□□□ -2.11
snR48snR48 PMC1P38929 1173 aaPredicted RBP1.85□□□□□ -2.11
snR48snR48 TEX1P53851 422 aaKnown RBP1.85□□□□□ -2.11
snR48snR48 SPO20Q04359 397 aa1.85□□□□□ -2.11
snR48snR48 ESF1Q06344 628 aaKnown RBP1.85□□□□□ -2.11
snR48snR48 IRC3Q06683 689 aa1.85□□□□□ -2.11
snR48snR48 URA1P28272 314 aaPredicted RBP1.84□□□□□ -2.11
snR48snR48 BEM3P32873 1128 aa1.84□□□□□ -2.11
snR48snR48 CEP3P40969 608 aa1.84□□□□□ -2.11
snR48snR48 GUS1P46655 708 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
snR48snR48 DUS1P53759 423 aaKnown RBP1.84□□□□□ -2.11
snR48snR48 AAT1Q01802 451 aa1.84□□□□□ -2.11
snR48snR48 FRE7Q12333 620 aa1.84□□□□□ -2.11
snR48snR48 THR1P17423 357 aaKnown RBP1.83□□□□□ -2.12
snR48snR48 RFA1P22336 621 aaKnown RBP1.83□□□□□ -2.12
snR48snR48 YBR139WP38109 508 aa1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 74.2 ms