RNA–Protein interactions for RNA: YOL138C

RTC1, Transcript of Subunit of the SEA (Seh1-associated) complex, yeast

Gene RTC1, Length 4,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTC1	YOL138C	CDC15	P27636	974 aa		4.81	□□□□□ -1.64
RTC1	YOL138C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
RTC1	YOL138C	NOP4	P37838	685 aa	Known RBP	4.81	□□□□□ -1.64
RTC1	YOL138C	TLG2	Q08144	397 aa		4.81	□□□□□ -1.64
RTC1	YOL138C	SCJ1	P25303	377 aa		4.8	□□□□□ -1.64
RTC1	YOL138C	PGS1	P25578	521 aa		4.8	□□□□□ -1.64
RTC1	YOL138C	YBR284W	P38150	797 aa		4.8	□□□□□ -1.64
RTC1	YOL138C	NPR3	P38742	1146 aa		4.8	□□□□□ -1.64
RTC1	YOL138C	YJR054W	P47114	497 aa		4.8	□□□□□ -1.64
RTC1	YOL138C	YLR297W	Q05899	129 aa		4.8	□□□□□ -1.64
RTC1	YOL138C	SWI3	P32591	825 aa		4.8	□□□□□ -1.64
RTC1	YOL138C	SAC6	P32599	642 aa	Known RBP	4.8	□□□□□ -1.64
RTC1	YOL138C	TRP2	P00899	507 aa	Known RBP	4.8	□□□□□ -1.64
RTC1	YOL138C	GPA1	P08539	472 aa		4.8	□□□□□ -1.64
RTC1	YOL138C	GSY2	P27472	705 aa		4.8	□□□□□ -1.64
RTC1	YOL138C	YER130C	P39959	443 aa		4.8	□□□□□ -1.64
RTC1	YOL138C	RCR2	Q03446	210 aa	Known RBP	4.8	□□□□□ -1.64
RTC1	YOL138C	YOR022C	Q12204	715 aa		4.8	□□□□□ -1.64
RTC1	YOL138C	PDR1	P12383	1068 aa		4.79	□□□□□ -1.64
RTC1	YOL138C	SEC23	P15303	768 aa	Known RBP	4.79	□□□□□ -1.64
RTC1	YOL138C	MBR1	P23493	339 aa		4.79	□□□□□ -1.64
RTC1	YOL138C	MPE1	P35728	441 aa	Known RBP	4.79	□□□□□ -1.64
RTC1	YOL138C	CDC27	P38042	758 aa		4.79	□□□□□ -1.64
RTC1	YOL138C	RVS167	P39743	482 aa	Known RBP	4.79	□□□□□ -1.64
RTC1	YOL138C	ENT3	P47160	408 aa		4.79	□□□□□ -1.64
RTC1	YOL138C	RSC1	P53236	928 aa		4.79	□□□□□ -1.64
RTC1	YOL138C	CWC21	Q03375	135 aa	Known RBP	4.79	□□□□□ -1.64
RTC1	YOL138C	STE20	Q03497	939 aa	Known RBP	4.79	□□□□□ -1.64
RTC1	YOL138C	SPP382	Q06411	708 aa	Predicted RBP	4.79	□□□□□ -1.64
RTC1	YOL138C	OPY2	Q06810	360 aa		4.79	□□□□□ -1.64
RTC1	YOL138C	SPO11	P23179	398 aa		4.79	□□□□□ -1.64
RTC1	YOL138C	KIP1	P28742	1111 aa		4.79	□□□□□ -1.64
RTC1	YOL138C	CCL1	P37366	393 aa		4.79	□□□□□ -1.64
RTC1	YOL138C	LCB2	P40970	561 aa		4.79	□□□□□ -1.64
RTC1	YOL138C	MRX6	P48564	524 aa		4.79	□□□□□ -1.64
RTC1	YOL138C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
RTC1	YOL138C	IWR1	Q07532	353 aa	Predicted RBP	4.79	□□□□□ -1.64
RTC1	YOL138C	COX4	P04037	155 aa		4.79	□□□□□ -1.64
RTC1	YOL138C	CHS2	P14180	963 aa		4.79	□□□□□ -1.64
RTC1	YOL138C	RAD27	P26793	382 aa		4.79	□□□□□ -1.64
RTC1	YOL138C	COQ8	P27697	501 aa		4.79	□□□□□ -1.64
RTC1	YOL138C	SMC2	P38989	1170 aa	Known RBP	4.79	□□□□□ -1.64
RTC1	YOL138C	SAH1	P39954	449 aa	Known RBP	4.79	□□□□□ -1.64
RTC1	YOL138C	TOS3	P43637	560 aa		4.79	□□□□□ -1.64
RTC1	YOL138C	NUT1	P53114	1132 aa		4.79	□□□□□ -1.64
RTC1	YOL138C	YPR078C	Q06813	372 aa		4.79	□□□□□ -1.64
RTC1	YOL138C	PSR2	Q07949	397 aa		4.79	□□□□□ -1.64
RTC1	YOL138C	ADK2	P26364	225 aa		4.78	□□□□□ -1.64
RTC1	YOL138C	SLA2	P33338	968 aa		4.78	□□□□□ -1.64
RTC1	YOL138C	SIP5	P40210	489 aa	Known RBP	4.78	□□□□□ -1.64
RTC1	YOL138C	MOB1	P40484	314 aa		4.78	□□□□□ -1.64
RTC1	YOL138C	AIP1	P46680	615 aa	Known RBP	4.78	□□□□□ -1.64
RTC1	YOL138C	AVT1	P47082	602 aa		4.78	□□□□□ -1.64
RTC1	YOL138C	CTR1	P49573	406 aa		4.78	□□□□□ -1.64
RTC1	YOL138C	ORC5	P50874	479 aa		4.78	□□□□□ -1.64
RTC1	YOL138C	YNL115C	P53925	644 aa		4.78	□□□□□ -1.64
RTC1	YOL138C	STP1	Q00947	519 aa		4.78	□□□□□ -1.64
RTC1	YOL138C	LEE1	Q02799	301 aa	Known RBP	4.78	□□□□□ -1.64
RTC1	YOL138C	SXM1	Q04175	944 aa	Known RBP	4.78	□□□□□ -1.64
RTC1	YOL138C	YDL057W	Q07379	328 aa		4.78	□□□□□ -1.64
RTC1	YOL138C	MLH2	Q07980	695 aa		4.78	□□□□□ -1.64
RTC1	YOL138C	YDL206W	Q12424	762 aa		4.78	□□□□□ -1.64
RTC1	YOL138C	FMP10	P40098	244 aa		4.78	□□□□□ -1.64
RTC1	YOL138C	RGR1	P19263	1082 aa		4.78	□□□□□ -1.64
RTC1	YOL138C	URK1	P27515	501 aa		4.78	□□□□□ -1.64
RTC1	YOL138C	TSA1	P34760	196 aa	Known RBP	4.78	□□□□□ -1.64
RTC1	YOL138C	SAP190	P36123	1033 aa		4.78	□□□□□ -1.64
RTC1	YOL138C	PMC1	P38929	1173 aa	Predicted RBP	4.78	□□□□□ -1.64
RTC1	YOL138C	UTP14	Q04500	899 aa	Known RBP	4.78	□□□□□ -1.64
RTC1	YOL138C	SHS1	Q07657	551 aa		4.78	□□□□□ -1.64
RTC1	YOL138C	YAP7	Q08182	245 aa		4.78	□□□□□ -1.64
RTC1	YOL138C	PKH2	Q12236	1081 aa	Known RBP	4.78	□□□□□ -1.64
RTC1	YOL138C	CTF3	Q12748	733 aa		4.78	□□□□□ -1.64
RTC1	YOL138C	YER152C	P10356	443 aa		4.77	□□□□□ -1.65
RTC1	YOL138C	TGL3	P40308	642 aa		4.77	□□□□□ -1.65
RTC1	YOL138C	RSM26	P47141	266 aa		4.77	□□□□□ -1.65
RTC1	YOL138C	YDR090C	Q03193	310 aa		4.77	□□□□□ -1.65
RTC1	YOL138C	FAL1	Q12099	399 aa	Known RBP	4.77	□□□□□ -1.65
RTC1	YOL138C	TPK1	P06244	397 aa		4.77	□□□□□ -1.65
RTC1	YOL138C	MTF1	P14908	341 aa	Known RBP	4.77	□□□□□ -1.65
RTC1	YOL138C	PEP7	P32609	515 aa		4.77	□□□□□ -1.65
RTC1	YOL138C	PTC3	P34221	468 aa	Known RBP	4.77	□□□□□ -1.65
RTC1	YOL138C	POL31	P46957	487 aa		4.77	□□□□□ -1.65
RTC1	YOL138C	HSH155	P49955	971 aa	Known RBP	4.77	□□□□□ -1.65
RTC1	YOL138C	CTR9	P89105	1077 aa		4.77	□□□□□ -1.65
RTC1	YOL138C	NEW1	Q08972	1196 aa	Known RBP	4.77	□□□□□ -1.65
RTC1	YOL138C	CDC37	P06101	506 aa	Known RBP	4.77	□□□□□ -1.65
RTC1	YOL138C	TOM70	P07213	617 aa	Known RBP	4.77	□□□□□ -1.65
RTC1	YOL138C	MRC1	P25588	1096 aa		4.77	□□□□□ -1.65
RTC1	YOL138C	IME2	P32581	645 aa		4.77	□□□□□ -1.65
RTC1	YOL138C	TYE7	P33122	291 aa	Predicted RBP	4.77	□□□□□ -1.65
RTC1	YOL138C	UBP5	P39944	805 aa		4.77	□□□□□ -1.65
RTC1	YOL138C	AI5_BETA	Q9ZZX0	354 aa		4.77	□□□□□ -1.65
RTC1	YOL138C	HEL1	P36113	551 aa		4.76	□□□□□ -1.65
RTC1	YOL138C	ARL1	P38116	183 aa	Known RBP	4.76	□□□□□ -1.65
RTC1	YOL138C	ALT1	P52893	592 aa		4.76	□□□□□ -1.65
RTC1	YOL138C	MZM1	Q03429	123 aa	Predicted RBP	4.76	□□□□□ -1.65
RTC1	YOL138C	NSE5	Q03718	556 aa		4.76	□□□□□ -1.65
RTC1	YOL138C	APC11	Q12157	165 aa		4.76	□□□□□ -1.65
RTC1	YOL138C	PPR1	P07272	904 aa	Predicted RBP	4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms