RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W CAJ1P39101 391 aa3.55□□□□□ -1.84
MSH2YOL090W MPH1P40562 993 aa3.55□□□□□ -1.84
MSH2YOL090W GUS1P46655 708 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
MSH2YOL090W YNL058CP53947 316 aa3.55□□□□□ -1.84
MSH2YOL090W RCF1Q03713 159 aa3.55□□□□□ -1.84
MSH2YOL090W GUD1Q07729 489 aa3.55□□□□□ -1.84
MSH2YOL090W YPL191CQ08930 360 aa3.55□□□□□ -1.84
MSH2YOL090W HMG1P12683 1054 aa3.54□□□□□ -1.84
MSH2YOL090W RAD16P31244 790 aa3.54□□□□□ -1.84
MSH2YOL090W PSY4P38193 441 aa3.54□□□□□ -1.84
MSH2YOL090W VTC4P47075 721 aa3.54□□□□□ -1.84
MSH2YOL090W PTK2P47116 818 aaKnown RBP3.54□□□□□ -1.84
MSH2YOL090W TIM10P87108 93 aa3.54□□□□□ -1.84
MSH2YOL090W YKU80Q04437 629 aa3.54□□□□□ -1.84
MSH2YOL090W PGC1Q08959 321 aa3.54□□□□□ -1.84
MSH2YOL090W CDC4P07834 779 aa3.54□□□□□ -1.84
MSH2YOL090W SCT1P32784 759 aa3.54□□□□□ -1.84
MSH2YOL090W ECM2P38241 364 aaKnown RBP3.54□□□□□ -1.84
MSH2YOL090W BFA1P47113 574 aa3.54□□□□□ -1.84
MSH2YOL090W PCL10P53124 433 aa3.54□□□□□ -1.84
MSH2YOL090W CNM67P53865 581 aaKnown RBP3.54□□□□□ -1.84
MSH2YOL090W PRP3Q03338 469 aaPredicted RBP3.54□□□□□ -1.84
MSH2YOL090W VTI1Q04338 217 aa3.54□□□□□ -1.84
MSH2YOL090W RSC3Q06639 885 aa3.54□□□□□ -1.84
MSH2YOL090W YDR306CQ06640 478 aa3.54□□□□□ -1.84
MSH2YOL090W SCM3Q12334 223 aa3.54□□□□□ -1.84
MSH2YOL090W TY1A-LR4P0C2I8 440 aaKnown RBP3.53□□□□□ -1.84
MSH2YOL090W TY1A-DR6P0CX70 440 aa3.53□□□□□ -1.84
MSH2YOL090W TY1A-ER1P0CX71 440 aa3.53□□□□□ -1.84
MSH2YOL090W TY1A-LR2P0CX72 440 aa3.53□□□□□ -1.84
MSH2YOL090W TY1A-PLP0CX73 440 aa3.53□□□□□ -1.84
MSH2YOL090W TY1A-JR1P0CX74 440 aa3.53□□□□□ -1.84
MSH2YOL090W TY1A-LR3P0CX75 440 aa3.53□□□□□ -1.84
MSH2YOL090W TY1A-ML2P0CX76 440 aa3.53□□□□□ -1.84
MSH2YOL090W DBP5P20449 482 aaKnown RBP3.53□□□□□ -1.84
MSH2YOL090W SHM2P37291 469 aaKnown RBP3.53□□□□□ -1.84
MSH2YOL090W LRP1P38801 184 aaKnown RBP3.53□□□□□ -1.84
MSH2YOL090W CCT3P39077 534 aaKnown RBP3.53□□□□□ -1.84
MSH2YOL090W DPH1P40487 425 aaKnown RBP3.53□□□□□ -1.84
MSH2YOL090W ARC35P53731 342 aaKnown RBP3.53□□□□□ -1.84
MSH2YOL090W YNR063WP53749 607 aa3.53□□□□□ -1.84
MSH2YOL090W SPO71Q03868 1245 aa3.53□□□□□ -1.84
MSH2YOL090W TY1A-GR1Q12085 440 aa3.53□□□□□ -1.84
MSH2YOL090W SPO21Q12411 609 aa3.53□□□□□ -1.84
MSH2YOL090W PGA3Q12746 312 aaKnown RBP3.53□□□□□ -1.84
MSH2YOL090W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.53□□□□□ -1.84
MSH2YOL090W TY1A-OLQ92392 440 aaKnown RBP3.53□□□□□ -1.84
MSH2YOL090W RER1P25560 188 aa3.53□□□□□ -1.84
MSH2YOL090W PAH1P32567 862 aa3.53□□□□□ -1.84
MSH2YOL090W PEX5P35056 612 aa3.53□□□□□ -1.84
MSH2YOL090W UBS1P38290 277 aa3.53□□□□□ -1.84
MSH2YOL090W TAN1P53072 289 aaPredicted RBP3.53□□□□□ -1.84
MSH2YOL090W CDC45Q08032 650 aa3.53□□□□□ -1.84
MSH2YOL090W PUS1Q12211 544 aaKnown RBP3.53□□□□□ -1.84
MSH2YOL090W CDC19P00549 500 aaKnown RBP3.53□□□□□ -1.85
MSH2YOL090W RGP1P16664 663 aa3.53□□□□□ -1.85
MSH2YOL090W AFG2P32794 780 aa3.53□□□□□ -1.85
MSH2YOL090W MDJ1P35191 511 aa3.53□□□□□ -1.85
MSH2YOL090W DUN1P39009 513 aa3.53□□□□□ -1.85
MSH2YOL090W NOP16P40007 231 aaKnown RBP3.53□□□□□ -1.85
MSH2YOL090W IRC6P43615 237 aa3.53□□□□□ -1.85
MSH2YOL090W RET2P43621 546 aa3.53□□□□□ -1.85
MSH2YOL090W BTN2P53286 410 aa3.53□□□□□ -1.85
MSH2YOL090W TLG1Q03322 224 aa3.53□□□□□ -1.85
MSH2YOL090W SGD1Q06132 899 aa3.53□□□□□ -1.85
MSH2YOL090W TFC6Q06339 672 aa3.53□□□□□ -1.85
MSH2YOL090W HIM1Q06674 414 aa3.53□□□□□ -1.85
MSH2YOL090W PEX15Q08215 383 aa3.53□□□□□ -1.85
MSH2YOL090W RRG1Q12167 365 aaPredicted RBP3.53□□□□□ -1.85
MSH2YOL090W ATP12P22135 325 aa3.52□□□□□ -1.85
MSH2YOL090W HOG1P32485 435 aa3.52□□□□□ -1.85
MSH2YOL090W YKU70P32807 602 aa3.52□□□□□ -1.85
MSH2YOL090W SAS3P34218 831 aa3.52□□□□□ -1.85
MSH2YOL090W EBP2P36049 427 aaKnown RBP3.52□□□□□ -1.85
MSH2YOL090W MCM7P38132 845 aa3.52□□□□□ -1.85
MSH2YOL090W SBE2P42223 864 aaKnown RBP3.52□□□□□ -1.85
MSH2YOL090W ROG3P43602 733 aa3.52□□□□□ -1.85
MSH2YOL090W YGR283CP53336 341 aaPredicted RBP3.52□□□□□ -1.85
MSH2YOL090W SSL2Q00578 843 aa3.52□□□□□ -1.85
MSH2YOL090W YMR018WQ04364 514 aa3.52□□□□□ -1.85
MSH2YOL090W EST2Q06163 884 aa3.52□□□□□ -1.85
MSH2YOL090W HSH49Q99181 213 aaPredicted RBP3.52□□□□□ -1.85
MSH2YOL090W ILS1P09436 1072 aaKnown RBP3.52□□□□□ -1.85
MSH2YOL090W MRP7P12687 371 aa3.52□□□□□ -1.85
MSH2YOL090W PHO81P17442 1178 aa3.52□□□□□ -1.85
MSH2YOL090W MAM1P40065 302 aa3.52□□□□□ -1.85
MSH2YOL090W VHR1P40522 640 aa3.52□□□□□ -1.85
MSH2YOL090W RMD8P43620 662 aa3.52□□□□□ -1.85
MSH2YOL090W YGR153WP48238 217 aa3.52□□□□□ -1.85
MSH2YOL090W PRP43P53131 767 aaKnown RBP3.52□□□□□ -1.85
MSH2YOL090W SLD3P53135 668 aa3.52□□□□□ -1.85
MSH2YOL090W RBG2P53295 368 aaKnown RBP3.52□□□□□ -1.85
MSH2YOL090W SKY1Q03656 742 aa3.52□□□□□ -1.85
MSH2YOL090W HLR1Q04429 423 aa3.52□□□□□ -1.85
MSH2YOL090W HSP42Q12329 375 aa3.52□□□□□ -1.85
MSH2YOL090W SNF1P06782 633 aaKnown RBP3.51□□□□□ -1.85
MSH2YOL090W DAL7P21826 554 aa3.51□□□□□ -1.85
MSH2YOL090W NPP1P25353 742 aa3.51□□□□□ -1.85
MSH2YOL090W CCR4P31384 837 aaKnown RBP3.51□□□□□ -1.85
MSH2YOL090W DID4P36108 232 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms