RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C PZF1P39933 429 aa3.4□□□□□ -1.87
VTI1YMR197C SSY5P47002 699 aa3.4□□□□□ -1.87
VTI1YMR197C SNU71P53207 620 aaKnown RBP3.4□□□□□ -1.87
VTI1YMR197C NRG1Q03125 231 aa3.4□□□□□ -1.87
VTI1YMR197C MUS81Q04149 632 aaPredicted RBP3.4□□□□□ -1.87
VTI1YMR197C SPO75Q07798 868 aa3.4□□□□□ -1.87
VTI1YMR197C IRC13Q08630 104 aa3.4□□□□□ -1.87
VTI1YMR197C NDJ1Q12366 352 aa3.4□□□□□ -1.87
VTI1YMR197C BNR1P40450 1375 aa3.39□□□□□ -1.87
VTI1YMR197C TOP3P13099 656 aa3.39□□□□□ -1.87
VTI1YMR197C GFA1P14742 717 aaKnown RBP3.39□□□□□ -1.87
VTI1YMR197C ARE1P25628 610 aa3.39□□□□□ -1.87
VTI1YMR197C PPZ2P33329 710 aa3.39□□□□□ -1.87
VTI1YMR197C YIR042CP40586 236 aa3.39□□□□□ -1.87
VTI1YMR197C TAD1P53065 400 aa3.39□□□□□ -1.87
VTI1YMR197C RIA1P53893 1110 aa3.39□□□□□ -1.87
VTI1YMR197C NAN1Q02931 896 aaKnown RBP3.39□□□□□ -1.87
VTI1YMR197C LRS4Q04087 347 aaKnown RBP3.39□□□□□ -1.87
VTI1YMR197C WRS1Q12109 432 aaKnown RBP3.39□□□□□ -1.87
VTI1YMR197C YLR415CO13578 112 aa3.38□□□□□ -1.87
VTI1YMR197C CDC43P18898 376 aa3.38□□□□□ -1.87
VTI1YMR197C KIN3P22209 435 aa3.38□□□□□ -1.87
VTI1YMR197C YCL002CP25565 263 aa3.38□□□□□ -1.87
VTI1YMR197C SAP190P36123 1033 aa3.38□□□□□ -1.87
VTI1YMR197C PFA3P42836 336 aa3.38□□□□□ -1.87
VTI1YMR197C VPS73P53142 486 aaKnown RBP3.38□□□□□ -1.87
VTI1YMR197C RSC3Q06639 885 aa3.38□□□□□ -1.87
VTI1YMR197C HCA4P20448 770 aaKnown RBP3.37□□□□□ -1.87
VTI1YMR197C HIS7P33734 552 aaKnown RBP3.37□□□□□ -1.87
VTI1YMR197C EMC3P36039 253 aa3.37□□□□□ -1.87
VTI1YMR197C SNM1P40993 198 aa3.37□□□□□ -1.87
VTI1YMR197C GYP8P43570 497 aa3.37□□□□□ -1.87
VTI1YMR197C UBP6P43593 499 aaKnown RBP3.37□□□□□ -1.87
VTI1YMR197C TAH11P47112 604 aa3.37□□□□□ -1.87
VTI1YMR197C HSV2P50079 448 aaPredicted RBP3.37□□□□□ -1.87
VTI1YMR197C TGL5Q12043 749 aa3.37□□□□□ -1.87
VTI1YMR197C OSH2Q12451 1283 aa3.37□□□□□ -1.87
VTI1YMR197C MET6P05694 767 aaKnown RBP3.36□□□□□ -1.87
VTI1YMR197C LAT1P12695 482 aaKnown RBP3.36□□□□□ -1.87
VTI1YMR197C RAD4P14736 754 aa3.36□□□□□ -1.87
VTI1YMR197C HSP60P19882 572 aaKnown RBP3.36□□□□□ -1.87
VTI1YMR197C CBR1P38626 284 aaKnown RBP3.36□□□□□ -1.87
VTI1YMR197C BCD1P38772 366 aa3.36□□□□□ -1.87
VTI1YMR197C RIX1P38883 763 aaPredicted RBP3.36□□□□□ -1.87
VTI1YMR197C ASM4Q05166 528 aa3.36□□□□□ -1.87
VTI1YMR197C SGO1Q08490 590 aa3.36□□□□□ -1.87
VTI1YMR197C SIC1P38634 284 aa3.35□□□□□ -1.87
VTI1YMR197C SET5P38890 526 aaKnown RBP3.35□□□□□ -1.87
VTI1YMR197C FMP52P40008 231 aa3.35□□□□□ -1.87
VTI1YMR197C YGR283CP53336 341 aaPredicted RBP3.35□□□□□ -1.87
VTI1YMR197C SSL2Q00578 843 aa3.35□□□□□ -1.87
VTI1YMR197C YDL124WQ07551 312 aaKnown RBP3.35□□□□□ -1.87
VTI1YMR197C THI21Q08975 551 aa3.35□□□□□ -1.87
VTI1YMR197C AIM44Q99299 758 aa3.35□□□□□ -1.87
VTI1YMR197C TOM70P07213 617 aaKnown RBP3.34□□□□□ -1.87
VTI1YMR197C TUB1P09733 447 aaKnown RBP3.34□□□□□ -1.87
VTI1YMR197C FLO10P36170 1169 aa3.34□□□□□ -1.87
VTI1YMR197C HOS4P40480 1083 aa3.34□□□□□ -1.87
VTI1YMR197C TIM54P47045 478 aa3.34□□□□□ -1.87
VTI1YMR197C MTR3P48240 250 aaPredicted RBP3.34□□□□□ -1.87
VTI1YMR197C TEL2P53038 688 aa3.34□□□□□ -1.87
VTI1YMR197C IMO32P53219 342 aa3.34□□□□□ -1.87
VTI1YMR197C DAM1P53267 343 aa3.34□□□□□ -1.87
VTI1YMR197C YGR125WP53273 1036 aa3.34□□□□□ -1.87
VTI1YMR197C TAF8Q03750 510 aa3.34□□□□□ -1.87
VTI1YMR197C REH1Q06709 432 aa3.34□□□□□ -1.87
VTI1YMR197C GPR1Q12361 961 aa3.34□□□□□ -1.87
VTI1YMR197C CIT1P00890 479 aa3.33□□□□□ -1.88
VTI1YMR197C PAM1P37304 830 aaKnown RBP3.33□□□□□ -1.88
VTI1YMR197C YIL166CP40445 542 aa3.33□□□□□ -1.88
VTI1YMR197C HUL4P40985 892 aa3.33□□□□□ -1.88
VTI1YMR197C SHR5P41912 237 aa3.33□□□□□ -1.88
VTI1YMR197C UBC11P52492 156 aa3.33□□□□□ -1.88
VTI1YMR197C MDM10P18409 493 aa3.32□□□□□ -1.88
VTI1YMR197C ALG2P43636 503 aa3.32□□□□□ -1.88
VTI1YMR197C YDR514CQ04408 483 aa3.32□□□□□ -1.88
VTI1YMR197C GAD1Q04792 585 aa3.32□□□□□ -1.88
VTI1YMR197C COQ11Q05892 277 aa3.32□□□□□ -1.88
VTI1YMR197C YNL162W-AQ3E7A8 72 aa3.32□□□□□ -1.88
VTI1YMR197C YBR182C-AQ8TGU6 64 aa3.32□□□□□ -1.88
VTI1YMR197C DMC1P25453 334 aa3.31□□□□□ -1.88
VTI1YMR197C ILV6P25605 309 aaKnown RBP3.31□□□□□ -1.88
VTI1YMR197C ADY2P25613 283 aa3.31□□□□□ -1.88
VTI1YMR197C HIR1P32479 840 aa3.31□□□□□ -1.88
VTI1YMR197C YBR259WP38338 688 aa3.31□□□□□ -1.88
VTI1YMR197C YJL206CP39529 758 aa3.31□□□□□ -1.88
VTI1YMR197C ZIP2P53061 704 aa3.31□□□□□ -1.88
VTI1YMR197C TEX1P53851 422 aaKnown RBP3.31□□□□□ -1.88
VTI1YMR197C SMX3P54999 86 aaPredicted RBP3.31□□□□□ -1.88
VTI1YMR197C ARO10Q06408 635 aa3.31□□□□□ -1.88
VTI1YMR197C MET7Q08645 548 aa3.31□□□□□ -1.88
VTI1YMR197C ATG11Q12527 1178 aa3.31□□□□□ -1.88
VTI1YMR197C PHR1P05066 565 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
VTI1YMR197C BET3P36149 193 aa3.3□□□□□ -1.88
VTI1YMR197C YHR020WP38708 688 aaKnown RBP3.3□□□□□ -1.88
VTI1YMR197C RLP7P40693 322 aaKnown RBP3.3□□□□□ -1.88
VTI1YMR197C BAP3P41815 604 aa3.3□□□□□ -1.88
VTI1YMR197C DIF1O13577 133 aa3.29□□□□□ -1.88
VTI1YMR197C PER1P25625 357 aa3.29□□□□□ -1.88
VTI1YMR197C REV7P38927 245 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms