RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT23	YKL020C	CDC16	P09798	840 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	YMR085W	P0CF18	432 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	REB1	P21538	810 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	RPC53	P25441	422 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	MEI4	P29467	408 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	MNN2	P38069	597 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	SIP3	P38717	1229 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	RLP7	P40693	322 aa	Known RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	AGX1	P43567	385 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	LYS4	P49367	693 aa	Predicted RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	TEL2	P53038	688 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	COG2	P53271	262 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	RVB1	Q03940	463 aa	Known RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	MGR3	Q04472	501 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	GPR1	Q12361	961 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	RAD1	P06777	1100 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	RPL19A	P0CX82	189 aa	Known RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	RPL19B	P0CX83	189 aa	Predicted RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	KGD2	P19262	463 aa	Predicted RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	ADE2	P21264	571 aa	Known RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	ISY1	P21374	235 aa	Predicted RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	SEC21	P32074	935 aa	Known RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	SRP40	P32583	406 aa	Predicted RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	NPL6	P32832	435 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	LOS1	P33418	1100 aa	Predicted RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	TEF4	P36008	412 aa	Known RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	RRF1	P38771	230 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	DSS1	P39112	969 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	ZRG8	P40021	1076 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	AXL1	P40851	1208 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	NUP42	P49686	430 aa	Known RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	IMD4	P50094	524 aa	Known RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	FYV6	P53913	173 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	INA17	Q02888	182 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	ATG16	Q03818	150 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	YDL124W	Q07551	312 aa	Known RBP	4.16	□□□□□ -1.74
SPT23	YKL020C	LOT6	Q07923	191 aa		4.16	□□□□□ -1.74
SPT23	YKL020C	MPH2	P0CD99	609 aa		4.15	□□□□□ -1.74
SPT23	YKL020C	SCJ1	P25303	377 aa		4.15	□□□□□ -1.74
SPT23	YKL020C	RAD27	P26793	382 aa		4.15	□□□□□ -1.74
SPT23	YKL020C	SEG2	P34250	1132 aa		4.15	□□□□□ -1.74
SPT23	YKL020C	OCT1	P35999	772 aa		4.15	□□□□□ -1.74
SPT23	YKL020C	VPS51	P36116	164 aa		4.15	□□□□□ -1.74
SPT23	YKL020C	PXL1	P36166	706 aa		4.15	□□□□□ -1.74
SPT23	YKL020C	ALG3	P38179	458 aa		4.15	□□□□□ -1.74
SPT23	YKL020C	MSR1	P38714	643 aa		4.15	□□□□□ -1.74
SPT23	YKL020C	TDA11	P38854	504 aa		4.15	□□□□□ -1.74
SPT23	YKL020C	MTW1	P39731	289 aa		4.15	□□□□□ -1.74
SPT23	YKL020C	BUD16	P39988	312 aa		4.15	□□□□□ -1.74
SPT23	YKL020C	RPA14	P50106	137 aa		4.15	□□□□□ -1.74
SPT23	YKL020C	MON1	P53129	644 aa		4.15	□□□□□ -1.74
SPT23	YKL020C	BOP3	P53958	396 aa		4.15	□□□□□ -1.74
SPT23	YKL020C	YPL109C	Q02981	657 aa		4.15	□□□□□ -1.74
SPT23	YKL020C	RSM24	Q03976	319 aa		4.15	□□□□□ -1.74
SPT23	YKL020C	NTG1	P31378	399 aa		4.15	□□□□□ -1.75
SPT23	YKL020C	GUA1	P38625	525 aa	Known RBP	4.15	□□□□□ -1.75
SPT23	YKL020C	KAP123	P40069	1113 aa	Known RBP	4.15	□□□□□ -1.75
SPT23	YKL020C	INA22	P40576	216 aa		4.15	□□□□□ -1.75
SPT23	YKL020C	YFL066C	P43538	392 aa		4.15	□□□□□ -1.75
SPT23	YKL020C	FMS1	P50264	508 aa		4.15	□□□□□ -1.75
SPT23	YKL020C	BSC5	P53755	489 aa		4.15	□□□□□ -1.75
SPT23	YKL020C	NOP6	Q07623	225 aa	Known RBP	4.15	□□□□□ -1.75
SPT23	YKL020C	ATP16	Q12165	160 aa		4.15	□□□□□ -1.75
SPT23	YKL020C	YAH1	Q12184	172 aa	Known RBP	4.15	□□□□□ -1.75
SPT23	YKL020C	YOL098C	Q12496	1037 aa		4.15	□□□□□ -1.75
SPT23	YKL020C	RMP1	Q12530	201 aa		4.15	□□□□□ -1.75
SPT23	YKL020C	RPC40	P07703	335 aa	Known RBP	4.14	□□□□□ -1.75
SPT23	YKL020C	GSY2	P27472	705 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	CDC15	P27636	974 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	ASF2	P32448	525 aa	Predicted RBP	4.14	□□□□□ -1.75
SPT23	YKL020C	YKL100C	P34248	587 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	RRM3	P38766	723 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	YER130C	P39959	443 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	SAP185	P40856	1058 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	TFG2	P41896	400 aa	Predicted RBP	4.14	□□□□□ -1.75
SPT23	YKL020C	TMA22	P47089	198 aa	Predicted RBP	4.14	□□□□□ -1.75
SPT23	YKL020C	RET3	P53600	189 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	VPS75	P53853	264 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	RRN5	Q02983	363 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	MUB1	Q03162	620 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	NMT1	P14743	455 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	OSM1	P21375	501 aa	Known RBP	4.14	□□□□□ -1.75
SPT23	YKL020C	DBP7	P36120	742 aa	Known RBP	4.14	□□□□□ -1.75
SPT23	YKL020C	FZO1	P38297	855 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	RTC3	P38804	111 aa	Predicted RBP	4.14	□□□□□ -1.75
SPT23	YKL020C	GEM1	P39722	662 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	TIF4631	P39935	952 aa	Known RBP	4.14	□□□□□ -1.75
SPT23	YKL020C	AIM10	P39965	576 aa	Known RBP	4.14	□□□□□ -1.75
SPT23	YKL020C	SEC28	P40509	296 aa	Known RBP	4.14	□□□□□ -1.75
SPT23	YKL020C	AGE2	P40529	298 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	GPD2	P41911	440 aa	Known RBP	4.14	□□□□□ -1.75
SPT23	YKL020C	HAM1	P47119	197 aa	Known RBP	4.14	□□□□□ -1.75
SPT23	YKL020C	YPT11	P48559	417 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	ALG12	P53730	551 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	SQS1	P53866	767 aa	Known RBP	4.14	□□□□□ -1.75
SPT23	YKL020C	VPS16	Q03308	798 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	SYF1	Q04048	859 aa	Predicted RBP	4.14	□□□□□ -1.75
SPT23	YKL020C	PPM1	Q04081	328 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	EMI2	Q04409	500 aa	Known RBP	4.14	□□□□□ -1.75
SPT23	YKL020C	BUG1	Q12191	341 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 20 ms