RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W MTC2P34246 357 aa2.77□□□□□ -1.97
SMD1YGR074W ERT1P38140 529 aa2.77□□□□□ -1.97
SMD1YGR074W GIC1P38785 314 aa2.77□□□□□ -1.97
SMD1YGR074W PLB1P39105 664 aa2.77□□□□□ -1.97
SMD1YGR074W NOP2P40991 618 aaKnown RBP2.77□□□□□ -1.97
SMD1YGR074W GYP8P43570 497 aa2.77□□□□□ -1.97
SMD1YGR074W BFA1P47113 574 aa2.77□□□□□ -1.97
SMD1YGR074W MTC3P53077 123 aa2.77□□□□□ -1.97
SMD1YGR074W RTS3P53289 263 aa2.77□□□□□ -1.97
SMD1YGR074W SFB2P53953 876 aa2.77□□□□□ -1.97
SMD1YGR074W ENA2Q01896 1091 aa2.77□□□□□ -1.97
SMD1YGR074W ATP25Q03153 612 aa2.77□□□□□ -1.97
SMD1YGR074W BUL2Q03758 920 aaKnown RBP2.77□□□□□ -1.97
SMD1YGR074W SIZ1Q04195 904 aa2.77□□□□□ -1.97
SMD1YGR074W ENA5Q12691 1091 aa2.77□□□□□ -1.97
SMD1YGR074W DIF1O13577 133 aa2.76□□□□□ -1.97
SMD1YGR074W RPP2AP05319 106 aaKnown RBP2.76□□□□□ -1.97
SMD1YGR074W NOT3P06102 836 aaKnown RBP2.76□□□□□ -1.97
SMD1YGR074W HSF1P10961 833 aa2.76□□□□□ -1.97
SMD1YGR074W SFL1P20134 766 aa2.76□□□□□ -1.97
SMD1YGR074W DAL7P21826 554 aa2.76□□□□□ -1.97
SMD1YGR074W URA1P28272 314 aaPredicted RBP2.76□□□□□ -1.97
SMD1YGR074W HOG1P32485 435 aa2.76□□□□□ -1.97
SMD1YGR074W AFR1P33304 620 aa2.76□□□□□ -1.97
SMD1YGR074W TYS1P36421 394 aaKnown RBP2.76□□□□□ -1.97
SMD1YGR074W ECM21P38167 1117 aaKnown RBP2.76□□□□□ -1.97
SMD1YGR074W MOH1P38191 138 aa2.76□□□□□ -1.97
SMD1YGR074W YAP1801P38856 637 aa2.76□□□□□ -1.97
SMD1YGR074W ZRG8P40021 1076 aa2.76□□□□□ -1.97
SMD1YGR074W RLP7P40693 322 aaKnown RBP2.76□□□□□ -1.97
SMD1YGR074W YJR008WP47085 338 aa2.76□□□□□ -1.97
SMD1YGR074W HFM1P51979 1187 aa2.76□□□□□ -1.97
SMD1YGR074W RAI1P53063 387 aaKnown RBP2.76□□□□□ -1.97
SMD1YGR074W SNP1Q00916 300 aaPredicted RBP2.76□□□□□ -1.97
SMD1YGR074W MSC2Q03455 724 aa2.76□□□□□ -1.97
SMD1YGR074W NHX1Q04121 633 aa2.76□□□□□ -1.97
SMD1YGR074W GIN4Q12263 1142 aa2.76□□□□□ -1.97
SMD1YGR074W RIB2Q12362 591 aaKnown RBP2.76□□□□□ -1.97
SMD1YGR074W PFK1P16861 987 aaKnown RBP2.75□□□□□ -1.97
SMD1YGR074W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
SMD1YGR074W PRP19P32523 503 aaKnown RBP2.75□□□□□ -1.97
SMD1YGR074W SRP101P32916 621 aa2.75□□□□□ -1.97
SMD1YGR074W TYE7P33122 291 aaPredicted RBP2.75□□□□□ -1.97
SMD1YGR074W MCD4P36051 919 aa2.75□□□□□ -1.97
SMD1YGR074W POA1P38218 177 aa2.75□□□□□ -1.97
SMD1YGR074W HSL7P38274 827 aa2.75□□□□□ -1.97
SMD1YGR074W SET5P38890 526 aaKnown RBP2.75□□□□□ -1.97
SMD1YGR074W MGS1P40151 587 aa2.75□□□□□ -1.97
SMD1YGR074W YFL052WP43551 465 aa2.75□□□□□ -1.97
SMD1YGR074W YKE2P52553 114 aa2.75□□□□□ -1.97
SMD1YGR074W TAD1P53065 400 aa2.75□□□□□ -1.97
SMD1YGR074W NPY1P53164 384 aa2.75□□□□□ -1.97
SMD1YGR074W YGR012WP53206 393 aa2.75□□□□□ -1.97
SMD1YGR074W FOL1P53848 824 aa2.75□□□□□ -1.97
SMD1YGR074W CRR1Q05790 422 aa2.75□□□□□ -1.97
SMD1YGR074W XYL2Q07993 356 aa2.75□□□□□ -1.97
SMD1YGR074W TRE2Q08693 809 aa2.75□□□□□ -1.97
SMD1YGR074W GUP2Q08929 609 aa2.75□□□□□ -1.97
SMD1YGR074W PCL2P25693 308 aa2.74□□□□□ -1.97
SMD1YGR074W HRR25P29295 494 aaKnown RBP2.74□□□□□ -1.97
SMD1YGR074W ATG19P35193 415 aa2.74□□□□□ -1.97
SMD1YGR074W PAF1P38351 445 aa2.74□□□□□ -1.97
SMD1YGR074W CKB2P38930 258 aa2.74□□□□□ -1.97
SMD1YGR074W MET12P46151 657 aa2.74□□□□□ -1.97
SMD1YGR074W MET13P53128 600 aa2.74□□□□□ -1.97
SMD1YGR074W YLR001CQ07895 862 aa2.74□□□□□ -1.97
SMD1YGR074W YTM1Q12024 460 aaPredicted RBP2.74□□□□□ -1.97
SMD1YGR074W TMA17Q12513 150 aa2.74□□□□□ -1.97
SMD1YGR074W HIS5P07172 385 aa2.73□□□□□ -1.97
SMD1YGR074W STE13P33894 931 aa2.73□□□□□ -1.97
SMD1YGR074W PCM1P38628 557 aaKnown RBP2.73□□□□□ -1.97
SMD1YGR074W TDA3P38758 523 aa2.73□□□□□ -1.97
SMD1YGR074W NPP2P39997 493 aa2.73□□□□□ -1.97
SMD1YGR074W ATF1P40353 525 aa2.73□□□□□ -1.97
SMD1YGR074W YIL108WP40483 696 aaKnown RBP2.73□□□□□ -1.97
SMD1YGR074W MND2P40577 368 aa2.73□□□□□ -1.97
SMD1YGR074W GZF3P42944 551 aaKnown RBP2.73□□□□□ -1.97
SMD1YGR074W STU2P46675 888 aa2.73□□□□□ -1.97
SMD1YGR074W AIM14P53109 570 aa2.73□□□□□ -1.97
SMD1YGR074W YKR011CQ02209 353 aa2.73□□□□□ -1.97
SMD1YGR074W MTQ2Q03920 221 aaPredicted RBP2.73□□□□□ -1.97
SMD1YGR074W ATG33Q06485 197 aa2.73□□□□□ -1.97
SMD1YGR074W TPO1Q07824 586 aa2.73□□□□□ -1.97
SMD1YGR074W YOR022CQ12204 715 aa2.73□□□□□ -1.97
SMD1YGR074W TMA7Q3E764 64 aaKnown RBP2.73□□□□□ -1.97
SMD1YGR074W YCL002CP25565 263 aa2.72□□□□□ -1.97
SMD1YGR074W YJR096WP47137 282 aa2.72□□□□□ -1.97
SMD1YGR074W YGR153WP48238 217 aa2.72□□□□□ -1.97
SMD1YGR074W LRS4Q04087 347 aaKnown RBP2.72□□□□□ -1.97
SMD1YGR074W RPN7Q06103 429 aaKnown RBP2.72□□□□□ -1.97
SMD1YGR074W YBR182C-AQ8TGU6 64 aa2.72□□□□□ -1.97
SMD1YGR074W KAR1P11927 433 aa2.71□□□□□ -1.98
SMD1YGR074W HMG1P12683 1054 aa2.71□□□□□ -1.98
SMD1YGR074W NGG1P32494 702 aa2.71□□□□□ -1.98
SMD1YGR074W RPD3P32561 433 aa2.71□□□□□ -1.98
SMD1YGR074W DID4P36108 232 aa2.71□□□□□ -1.98
SMD1YGR074W YKR075CP36155 307 aa2.71□□□□□ -1.98
SMD1YGR074W MAL31P38156 614 aa2.71□□□□□ -1.98
SMD1YGR074W PZF1P39933 429 aa2.71□□□□□ -1.98
SMD1YGR074W UBC9P50623 157 aaPredicted RBP2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 86.1 ms