RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	MTQ2	Q03920	221 aa	Predicted RBP	2.89	□□□□□ -1.95
NCL1	YBL024W	YDR514C	Q04408	483 aa		2.89	□□□□□ -1.95
NCL1	YBL024W	HIS5	P07172	385 aa		2.88	□□□□□ -1.95
NCL1	YBL024W	MPH2	P0CD99	609 aa		2.88	□□□□□ -1.95
NCL1	YBL024W	PCM1	P38628	557 aa	Known RBP	2.88	□□□□□ -1.95
NCL1	YBL024W	MET12	P46151	657 aa		2.88	□□□□□ -1.95
NCL1	YBL024W	HXT16	P47185	567 aa		2.88	□□□□□ -1.95
NCL1	YBL024W	TAD1	P53065	400 aa		2.88	□□□□□ -1.95
NCL1	YBL024W	AIM14	P53109	570 aa		2.88	□□□□□ -1.95
NCL1	YBL024W	LRS4	Q04087	347 aa	Known RBP	2.88	□□□□□ -1.95
NCL1	YBL024W	ADY3	Q07732	790 aa		2.88	□□□□□ -1.95
NCL1	YBL024W	SPE1	P08432	466 aa		2.88	□□□□□ -1.95
NCL1	YBL024W	DAL7	P21826	554 aa		2.88	□□□□□ -1.95
NCL1	YBL024W	YCL002C	P25565	263 aa		2.88	□□□□□ -1.95
NCL1	YBL024W	HOG1	P32485	435 aa		2.88	□□□□□ -1.95
NCL1	YBL024W	TRM2	P33753	639 aa		2.88	□□□□□ -1.95
NCL1	YBL024W	LST4	P34239	828 aa		2.88	□□□□□ -1.95
NCL1	YBL024W	GRX7	P38068	203 aa		2.88	□□□□□ -1.95
NCL1	YBL024W	ECM21	P38167	1117 aa	Known RBP	2.88	□□□□□ -1.95
NCL1	YBL024W	YJR096W	P47137	282 aa		2.88	□□□□□ -1.95
NCL1	YBL024W	PEX8	P53248	589 aa		2.88	□□□□□ -1.95
NCL1	YBL024W	SNP1	Q00916	300 aa	Predicted RBP	2.88	□□□□□ -1.95
NCL1	YBL024W	ATG33	Q06485	197 aa		2.88	□□□□□ -1.95
NCL1	YBL024W	HMG1	P12683	1054 aa		2.87	□□□□□ -1.95
NCL1	YBL024W	MIH1	P23748	554 aa		2.87	□□□□□ -1.95
NCL1	YBL024W	EUG1	P32474	517 aa		2.87	□□□□□ -1.95
NCL1	YBL024W	ATG19	P35193	415 aa		2.87	□□□□□ -1.95
NCL1	YBL024W	PLB1	P39105	664 aa		2.87	□□□□□ -1.95
NCL1	YBL024W	CDA1	Q06702	301 aa		2.87	□□□□□ -1.95
NCL1	YBL024W	NOT3	P06102	836 aa	Known RBP	2.86	□□□□□ -1.95
NCL1	YBL024W	RFA1	P22336	621 aa	Known RBP	2.86	□□□□□ -1.95
NCL1	YBL024W	URA1	P28272	314 aa	Predicted RBP	2.86	□□□□□ -1.95
NCL1	YBL024W	PRP19	P32523	503 aa	Known RBP	2.86	□□□□□ -1.95
NCL1	YBL024W	YBR071W	P38243	211 aa		2.86	□□□□□ -1.95
NCL1	YBL024W	CKB2	P38930	258 aa		2.86	□□□□□ -1.95
NCL1	YBL024W	COG6	P53959	839 aa		2.86	□□□□□ -1.95
NCL1	YBL024W	HDA1	P53973	706 aa		2.86	□□□□□ -1.95
NCL1	YBL024W	VPS30	Q02948	557 aa		2.86	□□□□□ -1.95
NCL1	YBL024W	HFD1	Q04458	532 aa		2.86	□□□□□ -1.95
NCL1	YBL024W	YDR338C	Q05497	695 aa		2.86	□□□□□ -1.95
NCL1	YBL024W	REH1	Q06709	432 aa		2.86	□□□□□ -1.95
NCL1	YBL024W	GUD1	Q07729	489 aa		2.86	□□□□□ -1.95
NCL1	YBL024W	GIN4	Q12263	1142 aa		2.86	□□□□□ -1.95
NCL1	YBL024W	CEP3	P40969	608 aa		2.86	□□□□□ -1.95
NCL1	YBL024W	ALY2	P47029	1046 aa		2.86	□□□□□ -1.95
NCL1	YBL024W	NOG2	P53742	486 aa	Known RBP	2.86	□□□□□ -1.95
NCL1	YBL024W	NHX1	Q04121	633 aa		2.86	□□□□□ -1.95
NCL1	YBL024W	GUP2	Q08929	609 aa		2.86	□□□□□ -1.95
NCL1	YBL024W	YBR182C-A	Q8TGU6	64 aa		2.86	□□□□□ -1.95
NCL1	YBL024W	CYS3	P31373	394 aa	Known RBP	2.85	□□□□□ -1.95
NCL1	YBL024W	RPD3	P32561	433 aa		2.85	□□□□□ -1.95
NCL1	YBL024W	STE13	P33894	931 aa		2.85	□□□□□ -1.95
NCL1	YBL024W	NUG1	P40010	520 aa	Known RBP	2.85	□□□□□ -1.95
NCL1	YBL024W	TPM2	P40414	161 aa		2.85	□□□□□ -1.95
NCL1	YBL024W	COG8	Q04632	607 aa		2.85	□□□□□ -1.95
NCL1	YBL024W	PNS1	Q12412	539 aa		2.85	□□□□□ -1.95
NCL1	YBL024W	PMI40	P29952	429 aa	Known RBP	2.84	□□□□□ -1.95
NCL1	YBL024W	CCR4	P31384	837 aa	Known RBP	2.84	□□□□□ -1.95
NCL1	YBL024W	RPN10	P38886	268 aa	Known RBP	2.84	□□□□□ -1.95
NCL1	YBL024W	OAF1	P39720	1047 aa	Predicted RBP	2.84	□□□□□ -1.95
NCL1	YBL024W	RLP7	P40693	322 aa	Known RBP	2.84	□□□□□ -1.95
NCL1	YBL024W	CHA4	P43634	648 aa		2.84	□□□□□ -1.95
NCL1	YBL024W	MSE1	P48525	536 aa		2.84	□□□□□ -1.95
NCL1	YBL024W	UBC9	P50623	157 aa	Predicted RBP	2.84	□□□□□ -1.95
NCL1	YBL024W	RAI1	P53063	387 aa	Known RBP	2.84	□□□□□ -1.95
NCL1	YBL024W	YKR011C	Q02209	353 aa		2.84	□□□□□ -1.95
NCL1	YBL024W	SND1	Q04007	877 aa		2.84	□□□□□ -1.95
NCL1	YBL024W	SSL1	Q04673	461 aa	Predicted RBP	2.84	□□□□□ -1.95
NCL1	YBL024W	YTM1	Q12024	460 aa	Predicted RBP	2.84	□□□□□ -1.95
NCL1	YBL024W	NTO1	Q12311	748 aa		2.84	□□□□□ -1.95
NCL1	YBL024W	TOP1	P04786	769 aa		2.84	□□□□□ -1.95
NCL1	YBL024W	PMA1	P05030	918 aa	Known RBP	2.84	□□□□□ -1.95
NCL1	YBL024W	PLC1	P32383	869 aa		2.84	□□□□□ -1.95
NCL1	YBL024W	SEC6	P32844	805 aa		2.84	□□□□□ -1.95
NCL1	YBL024W	AIM21	P40563	679 aa		2.84	□□□□□ -1.95
NCL1	YBL024W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	2.84	□□□□□ -1.95	not detected
NCL1	YBL024W	PEX14	P53112	341 aa		2.84	□□□□□ -1.95
NCL1	YBL024W	TGL2	P54857	326 aa		2.84	□□□□□ -1.95
NCL1	YBL024W	TRE2	Q08693	809 aa		2.84	□□□□□ -1.95
NCL1	YBL024W	NPC2	Q12408	173 aa		2.84	□□□□□ -1.95
NCL1	YBL024W	RPS9A	O13516	197 aa	Known RBP	2.83	□□□□□ -1.96
NCL1	YBL024W	DIF1	O13577	133 aa		2.83	□□□□□ -1.96
NCL1	YBL024W	PFK1	P16861	987 aa	Known RBP	2.83	□□□□□ -1.96
NCL1	YBL024W	DAL3	P32459	195 aa		2.83	□□□□□ -1.96
NCL1	YBL024W	DCG1	P32460	244 aa		2.83	□□□□□ -1.96
NCL1	YBL024W	TYE7	P33122	291 aa	Predicted RBP	2.83	□□□□□ -1.96
NCL1	YBL024W	TFC4	P33339	1025 aa		2.83	□□□□□ -1.96
NCL1	YBL024W	HSL7	P38274	827 aa		2.83	□□□□□ -1.96
NCL1	YBL024W	SHR5	P41912	237 aa		2.83	□□□□□ -1.96
NCL1	YBL024W	PHO23	P50947	330 aa		2.83	□□□□□ -1.96
NCL1	YBL024W	CRR1	Q05790	422 aa		2.83	□□□□□ -1.96
NCL1	YBL024W	AIM39	Q08223	395 aa		2.83	□□□□□ -1.96
NCL1	YBL024W	PUS9	Q12069	462 aa		2.83	□□□□□ -1.96
NCL1	YBL024W	HAL9	Q12180	1030 aa		2.83	□□□□□ -1.96
NCL1	YBL024W	YOR022C	Q12204	715 aa		2.83	□□□□□ -1.96
NCL1	YBL024W	KCS1	Q12494	1050 aa		2.83	□□□□□ -1.96
NCL1	YBL024W	SAP190	P36123	1033 aa		2.83	□□□□□ -1.96
NCL1	YBL024W	YKR051W	P36142	418 aa		2.83	□□□□□ -1.96
NCL1	YBL024W	SET5	P38890	526 aa	Known RBP	2.83	□□□□□ -1.96
NCL1	YBL024W	DOT6	P40059	670 aa	Known RBP	2.83	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms