RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 SRGAP3O43295 1099 aa16.12■□□□□ 0.17
PHGDH-218ENST00000641491 YBX3P16989 372 aaKnown RBP eCLIP16.12■□□□□ 0.172e-7■□□□□ 10.4
PHGDH-218ENST00000641491 IFIT5Q13325 482 aaKnown RBP16.12■□□□□ 0.17
PHGDH-218ENST00000641491 DDX46Q7L014 1031 aaKnown RBP16.12■□□□□ 0.17
PHGDH-218ENST00000641491 RPAP2Q8IXW5 612 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-218ENST00000641491 RWDD1Q9H446 243 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-218ENST00000641491 N4BP2Q86UW6 1770 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-218ENST00000641491 ANKRD18BA2A2Z9 1011 aa16.11■□□□□ 0.17
PHGDH-218ENST00000641491 LMBR1LQ6UX01 489 aa16.11■□□□□ 0.17
PHGDH-218ENST00000641491 CCDC24Q8N4L8 307 aa16.11■□□□□ 0.17
PHGDH-218ENST00000641491 RBM17Q96I25 401 aaKnown RBP16.11■□□□□ 0.17
PHGDH-218ENST00000641491 CCDC136Q96JN2 1154 aa16.11■□□□□ 0.17
PHGDH-218ENST00000641491 CCDC85AQ96PX6 553 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-218ENST00000641491 CDC5LQ99459 802 aaKnown RBP16.11■□□□□ 0.17
PHGDH-218ENST00000641491 BRIP1Q9BX63 1249 aa16.11■□□□□ 0.17
PHGDH-218ENST00000641491 PLA2G12BQ9BX93 195 aa16.11■□□□□ 0.17
PHGDH-218ENST00000641491 COL24A1Q17RW2 1714 aa16.11■□□□□ 0.17
PHGDH-218ENST00000641491 H0YIN7 160 aa16.1■□□□□ 0.17
PHGDH-218ENST00000641491 IGHMBP2P38935 993 aaKnown RBP16.1■□□□□ 0.17
PHGDH-218ENST00000641491 GPBP1L1Q9HC44 474 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-218ENST00000641491 HSP90AB4PQ58FF6 505 aa16.09■□□□□ 0.17
PHGDH-218ENST00000641491 SLC10A5Q5PT55 438 aa16.09■□□□□ 0.17
PHGDH-218ENST00000641491 MPHOSPH8Q99549 860 aa16.09■□□□□ 0.17
PHGDH-218ENST00000641491 ABCC12Q96J65 1359 aa16.09■□□□□ 0.17
PHGDH-218ENST00000641491 CEP85Q6P2H3 762 aa16.08■□□□□ 0.16
PHGDH-218ENST00000641491 C2CD5Q86YS7 1000 aa16.08■□□□□ 0.16
PHGDH-218ENST00000641491 ZNF622Q969S3 477 aaKnown RBP eCLIP16.08■□□□□ 0.162e-6■■■□□ 15.2
PHGDH-218ENST00000641491 PPP4R2Q9NY27 417 aa16.08■□□□□ 0.16
PHGDH-218ENST00000641491 ITGA6P23229 1130 aa16.07■□□□□ 0.16
PHGDH-218ENST00000641491 CASP7P55210 303 aa16.07■□□□□ 0.16
PHGDH-218ENST00000641491 G3BP1Q13283 466 aaKnown RBP eCLIP16.07■□□□□ 0.168e-8■■■■□ 22.6
PHGDH-218ENST00000641491 FAM161AQ3B820 660 aa16.07■□□□□ 0.16
PHGDH-218ENST00000641491 ANKRD18AQ8IVF6 992 aa16.07■□□□□ 0.16
PHGDH-218ENST00000641491 SYNE4Q8N205 404 aa16.07■□□□□ 0.16
PHGDH-218ENST00000641491 ANKRD44Q8N8A2 993 aa16.07■□□□□ 0.16
PHGDH-218ENST00000641491 CNNM1Q9NRU3 951 aa16.07■□□□□ 0.16
PHGDH-218ENST00000641491 RIC1Q4ADV7 1423 aa16.07■□□□□ 0.16
PHGDH-218ENST00000641491 NPR1P16066 1061 aa16.06■□□□□ 0.16
PHGDH-218ENST00000641491 ALDH1B1P30837 517 aa16.06■□□□□ 0.16
PHGDH-218ENST00000641491 ATP8B2P98198 1209 aa16.06■□□□□ 0.16
PHGDH-218ENST00000641491 TTLL11Q8NHH1 800 aa16.06■□□□□ 0.16
PHGDH-218ENST00000641491 FOXO4P98177 505 aa16.05■□□□□ 0.16
PHGDH-218ENST00000641491 SF3B3Q15393 1217 aaKnown RBP16.05■□□□□ 0.16
PHGDH-218ENST00000641491 RABL6Q3YEC7 729 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-218ENST00000641491 ERC1Q8IUD2 1116 aa16.05■□□□□ 0.16
PHGDH-218ENST00000641491 MASTLQ96GX5 879 aa16.05■□□□□ 0.16
PHGDH-218ENST00000641491 GREM2Q9H772 168 aa16.05■□□□□ 0.16
PHGDH-218ENST00000641491 C10orf71Q711Q0 1435 aa16.04■□□□□ 0.16
PHGDH-218ENST00000641491 SURF6O75683 361 aaKnown RBP16.04■□□□□ 0.16
PHGDH-218ENST00000641491 MTX1Q13505 466 aa16.04■□□□□ 0.16
PHGDH-218ENST00000641491 CNKSR1Q969H4 720 aa16.04■□□□□ 0.16
PHGDH-218ENST00000641491 CD2APQ9Y5K6 639 aa16.04■□□□□ 0.16
PHGDH-218ENST00000641491 GTF3C3Q9Y5Q9 886 aa16.04■□□□□ 0.16
PHGDH-218ENST00000641491 CSF1RP07333 972 aa16.03■□□□□ 0.16
PHGDH-218ENST00000641491 TGFB2P61812 414 aa16.03■□□□□ 0.16
PHGDH-218ENST00000641491 GRAPQ13588 217 aa16.03■□□□□ 0.16
PHGDH-218ENST00000641491 EPHA10Q5JZY3 1008 aa16.03■□□□□ 0.16
PHGDH-218ENST00000641491 LDHAL6AQ6ZMR3 332 aa16.03■□□□□ 0.16
PHGDH-218ENST00000641491 TMC4Q7Z404 712 aa16.03■□□□□ 0.16
PHGDH-218ENST00000641491 GRAPLQ8TC17 118 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-218ENST00000641491 BCL11AQ9H165 835 aa16.03■□□□□ 0.16
PHGDH-218ENST00000641491 SIL1Q9H173 461 aa16.03■□□□□ 0.16
PHGDH-218ENST00000641491 RTL9Q8NET4 1388 aa16.02■□□□□ 0.16
PHGDH-218ENST00000641491 HDAC1Q13547 482 aaPredicted RBP16.02■□□□□ 0.16
PHGDH-218ENST00000641491 STYK1Q6J9G0 422 aa16.02■□□□□ 0.16
PHGDH-218ENST00000641491 GCC1Q96CN9 775 aa16.02■□□□□ 0.16
PHGDH-218ENST00000641491 PCDHB15Q9Y5E8 787 aa16.02■□□□□ 0.16
PHGDH-218ENST00000641491 PNMA6EA0A0J9YXQ4 647 aa16.01■□□□□ 0.15
PHGDH-218ENST00000641491 APBB1O00213 710 aa16.01■□□□□ 0.15
PHGDH-218ENST00000641491 PPEF1O14829 653 aaPredicted RBP16.01■□□□□ 0.15
PHGDH-218ENST00000641491 KCNJ4P48050 445 aa16.01■□□□□ 0.15
PHGDH-218ENST00000641491 CRY2Q49AN0 593 aa16.01■□□□□ 0.15
PHGDH-218ENST00000641491 SSH3Q8TE77 659 aa16.01■□□□□ 0.15
PHGDH-218ENST00000641491 KAZALD1Q96I82 304 aa16.01■□□□□ 0.15
PHGDH-218ENST00000641491 RAB11FIP3O75154 756 aa16■□□□□ 0.15
PHGDH-218ENST00000641491 BBOX1O75936 387 aa16■□□□□ 0.15
PHGDH-218ENST00000641491 SRGNP10124 158 aa16■□□□□ 0.15
PHGDH-218ENST00000641491 IL15P40933 162 aaPredicted RBP16■□□□□ 0.15
PHGDH-218ENST00000641491 RPS8P62241 208 aaKnown RBP16■□□□□ 0.15
PHGDH-218ENST00000641491 METTL24Q5JXM2 366 aa16■□□□□ 0.15
PHGDH-218ENST00000641491 CENPQQ7L2Z9 268 aaPredicted RBP16■□□□□ 0.15
PHGDH-218ENST00000641491 ZNF526Q8TF50 670 aaPredicted RBP16■□□□□ 0.15
PHGDH-218ENST00000641491 CRAMP1Q96RY5 1269 aa16■□□□□ 0.15
PHGDH-218ENST00000641491 FBXO3Q9UK99 471 aa16■□□□□ 0.15
PHGDH-218ENST00000641491 LAMB2P55268 1798 aa16■□□□□ 0.15
PHGDH-218ENST00000641491 CHRNA5P30532 468 aa15.99■□□□□ 0.15
PHGDH-218ENST00000641491 POLA2Q14181 598 aa15.99■□□□□ 0.15
PHGDH-218ENST00000641491 C3orf67Q6ZVT6 689 aa15.99■□□□□ 0.15
PHGDH-218ENST00000641491 TTLL6Q8N841 843 aa15.99■□□□□ 0.15
PHGDH-218ENST00000641491 COPRSQ9NQ92 184 aa15.99■□□□□ 0.15
PHGDH-218ENST00000641491 SEC31BQ9NQW1 1179 aa15.99■□□□□ 0.15
PHGDH-218ENST00000641491 PIM2Q9P1W9 311 aa15.99■□□□□ 0.15
PHGDH-218ENST00000641491 EXOC6BQ9Y2D4 811 aa15.99■□□□□ 0.15
PHGDH-218ENST00000641491 MROH5Q6ZUA9 1318 aa15.98■□□□□ 0.15
PHGDH-218ENST00000641491 KLRG2A4D1S0 409 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-218ENST00000641491 EYA2O00167 538 aa15.98■□□□□ 0.15
PHGDH-218ENST00000641491 CIAO1O76071 339 aa15.98■□□□□ 0.15
PHGDH-218ENST00000641491 DPEP1P16444 411 aa15.98■□□□□ 0.15
PHGDH-218ENST00000641491 DALRD3Q5D0E6 543 aaKnown RBP15.98■□□□□ 0.15
PHGDH-218ENST00000641491 SOGA3Q5TF21 947 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms