RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 ZEB1P37275 1124 aaPredicted RBP19.05■□□□□ 0.64
SRRT-219ENST00000641476 SAPCD2Q86UD0 394 aa19.05■□□□□ 0.64
SRRT-219ENST00000641476 CHPF2Q9P2E5 772 aa19.05■□□□□ 0.64
SRRT-219ENST00000641476 PPIP5K2O43314 1243 aa19.04■□□□□ 0.64
SRRT-219ENST00000641476 HOXB7P09629 217 aa19.04■□□□□ 0.64
SRRT-219ENST00000641476 AIMP1Q12904 312 aaKnown RBP19.04■□□□□ 0.64
SRRT-219ENST00000641476 COPS6Q7L5N1 327 aa19.04■□□□□ 0.64
SRRT-219ENST00000641476 DDX60Q8IY21 1712 aaKnown RBP19.04■□□□□ 0.64
SRRT-219ENST00000641476 ADARB2Q9NS39 739 aaKnown RBP19.04■□□□□ 0.64
SRRT-219ENST00000641476 DGKZQ13574 1117 aa19.03■□□□□ 0.64
SRRT-219ENST00000641476 GRIPAP1Q4V328 841 aa19.03■□□□□ 0.64
SRRT-219ENST00000641476 HSP90AB3PQ58FF7 597 aa19.03■□□□□ 0.64
SRRT-219ENST00000641476 HDGFL1Q5TGJ6 251 aa19.03■□□□□ 0.64
SRRT-219ENST00000641476 UTP14AQ9BVJ6 771 aaKnown RBP19.03■□□□□ 0.64
SRRT-219ENST00000641476 GLIS2Q9BZE0 524 aaPredicted RBP19.03■□□□□ 0.64
SRRT-219ENST00000641476 ZNF408Q9H9D4 720 aa19.03■□□□□ 0.64
SRRT-219ENST00000641476 GPRC5DQ9NZD1 345 aa19.03■□□□□ 0.64
SRRT-219ENST00000641476 BRPF1P55201 1214 aaPredicted RBP19.02■□□□□ 0.64
SRRT-219ENST00000641476 AOC3Q16853 763 aa19.02■□□□□ 0.64
SRRT-219ENST00000641476 RBM17Q96I25 401 aaKnown RBP19.02■□□□□ 0.64
SRRT-219ENST00000641476 CRAMP1Q96RY5 1269 aa19.02■□□□□ 0.64
SRRT-219ENST00000641476 CIAPIN1Q6FI81 312 aa19.01■□□□□ 0.63
SRRT-219ENST00000641476 NLRP10Q86W26 655 aa19.01■□□□□ 0.63
SRRT-219ENST00000641476 MBIPQ9NS73 344 aa19.01■□□□□ 0.63
SRRT-219ENST00000641476 LRRC37AA6NMS7 1700 aa19■□□□□ 0.63
SRRT-219ENST00000641476 APAF1O14727 1248 aa19■□□□□ 0.63
SRRT-219ENST00000641476 NLRP3Q96P20 1036 aa19■□□□□ 0.63
SRRT-219ENST00000641476 ABCC4O15439 1325 aa19■□□□□ 0.63
SRRT-219ENST00000641476 GMPSP49915 693 aaPredicted RBP18.99■□□□□ 0.63
SRRT-219ENST00000641476 TCIRG1Q13488 830 aa18.99■□□□□ 0.63
SRRT-219ENST00000641476 SLC10A5Q5PT55 438 aa18.99■□□□□ 0.63
SRRT-219ENST00000641476 DUSP27Q5VZP5 1158 aa18.99■□□□□ 0.63
SRRT-219ENST00000641476 HHIPL1Q96JK4 782 aa18.99■□□□□ 0.63
SRRT-219ENST00000641476 TMX4Q9H1E5 349 aaPredicted RBP18.99■□□□□ 0.63
SRRT-219ENST00000641476 ZNF853P0CG23 659 aa18.98■□□□□ 0.63
SRRT-219ENST00000641476 CXCL9Q07325 125 aa18.98■□□□□ 0.63
SRRT-219ENST00000641476 IFT57Q9NWB7 429 aa18.98■□□□□ 0.63
SRRT-219ENST00000641476 DBF4Q9UBU7 674 aaPredicted RBP18.98■□□□□ 0.63
SRRT-219ENST00000641476 ZNRF3Q9ULT6 936 aa18.98■□□□□ 0.63
SRRT-219ENST00000641476 SH3TC1Q8TE82 1336 aa18.98■□□□□ 0.63
SRRT-219ENST00000641476 HCLS1P14317 486 aaPredicted RBP18.97■□□□□ 0.63
SRRT-219ENST00000641476 PLBD2Q8NHP8 589 aa18.97■□□□□ 0.63
SRRT-219ENST00000641476 TRMT112Q9UI30 125 aaKnown RBP18.97■□□□□ 0.63
SRRT-219ENST00000641476 TAF1P21675 1872 aa18.97■□□□□ 0.63
SRRT-219ENST00000641476 TRPM7Q96QT4 1865 aa18.97■□□□□ 0.63
SRRT-219ENST00000641476 CALD1Q05682 793 aaKnown RBP18.96■□□□□ 0.63
SRRT-219ENST00000641476 ZIC5Q96T25 663 aa18.96■□□□□ 0.63
SRRT-219ENST00000641476 BCL2L13Q9BXK5 485 aa18.96■□□□□ 0.63
SRRT-219ENST00000641476 ATP6V0A2Q9Y487 856 aa18.96■□□□□ 0.63
SRRT-219ENST00000641476 DUOX1Q9NRD9 1551 aa18.96■□□□□ 0.63
SRRT-219ENST00000641476 NOGQ13253 232 aa18.95■□□□□ 0.62
SRRT-219ENST00000641476 ZNF428Q96B54 188 aa18.95■□□□□ 0.62
SRRT-219ENST00000641476 RAD17O75943 681 aa18.94■□□□□ 0.62
SRRT-219ENST00000641476 HIRAP54198 1017 aaPredicted RBP18.94■□□□□ 0.62
SRRT-219ENST00000641476 GNAI1P63096 354 aa18.94■□□□□ 0.62
SRRT-219ENST00000641476 ANKRD13DQ6ZTN6 518 aa18.94■□□□□ 0.62
SRRT-219ENST00000641476 CDC37L1Q7L3B6 337 aa18.94■□□□□ 0.62
SRRT-219ENST00000641476 SUPT20HQ8NEM7 779 aa18.94■□□□□ 0.62
SRRT-219ENST00000641476 TRPM4Q8TD43 1214 aa18.94■□□□□ 0.62
SRRT-219ENST00000641476 ISCA1Q9BUE6 129 aa18.94■□□□□ 0.62
SRRT-219ENST00000641476 VPS33BQ9H267 617 aa18.94■□□□□ 0.62
SRRT-219ENST00000641476 HYPKQ9NX55 129 aa18.94■□□□□ 0.62
SRRT-219ENST00000641476 PGAP2Q9UHJ9 254 aa18.94■□□□□ 0.62
SRRT-219ENST00000641476 COL4A1P02462 1669 aa18.94■□□□□ 0.62
SRRT-219ENST00000641476 SOX10P56693 466 aa18.93■□□□□ 0.62
SRRT-219ENST00000641476 HUNKP57058 714 aa18.93■□□□□ 0.62
SRRT-219ENST00000641476 CCDC184Q52MB2 194 aa18.93■□□□□ 0.62
SRRT-219ENST00000641476 DPP8Q6V1X1 898 aaPredicted RBP18.93■□□□□ 0.62
SRRT-219ENST00000641476 ZC3H15Q8WU90 426 aaKnown RBP18.93■□□□□ 0.62
SRRT-219ENST00000641476 CDHR2Q9BYE9 1310 aa18.93■□□□□ 0.62
SRRT-219ENST00000641476 SHTN1A0MZ66 631 aa18.92■□□□□ 0.62
SRRT-219ENST00000641476 ATP5J2-PTCD1G3V325 749 aa18.92■□□□□ 0.62
SRRT-219ENST00000641476 GRAPQ13588 217 aa18.92■□□□□ 0.62
SRRT-219ENST00000641476 DLK2Q6UY11 383 aa18.92■□□□□ 0.62
SRRT-219ENST00000641476 GRAPLQ8TC17 118 aaPredicted RBP18.92■□□□□ 0.62
SRRT-219ENST00000641476 TNRC18O15417 2968 aaPredicted RBP18.91■□□□□ 0.62
SRRT-219ENST00000641476 DDX46Q7L014 1031 aaKnown RBP18.91■□□□□ 0.62
SRRT-219ENST00000641476 USP48Q86UV5 1035 aa18.91■□□□□ 0.62
SRRT-219ENST00000641476 RTFDC1Q9BY42 306 aaPredicted RBP18.91■□□□□ 0.62
SRRT-219ENST00000641476 CASP8AP2Q9UKL3 1982 aa18.91■□□□□ 0.62
SRRT-219ENST00000641476 GOLGA2Q08379 1002 aa18.9■□□□□ 0.62
SRRT-219ENST00000641476 KIAA2012Q0VF49 1180 aa18.9■□□□□ 0.62
SRRT-219ENST00000641476 TNIP1Q15025 636 aa18.9■□□□□ 0.62
SRRT-219ENST00000641476 CNOT7Q9UIV1 285 aaKnown RBP18.9■□□□□ 0.62
SRRT-219ENST00000641476 ELL2O00472 640 aaPredicted RBP18.89■□□□□ 0.61
SRRT-219ENST00000641476 BBOX1O75936 387 aa18.89■□□□□ 0.61
SRRT-219ENST00000641476 MICALL2Q8IY33 904 aa18.89■□□□□ 0.61
SRRT-219ENST00000641476 MPNDQ8N594 471 aa18.89■□□□□ 0.61
SRRT-219ENST00000641476 C8orf58Q8NAV2 365 aa18.89■□□□□ 0.61
SRRT-219ENST00000641476 FAM89AQ96GI7 184 aa18.89■□□□□ 0.61
SRRT-219ENST00000641476 PHAXQ9H814 394 aaKnown RBP18.89■□□□□ 0.61
SRRT-219ENST00000641476 H7C1D1 291 aa18.88■□□□□ 0.61
SRRT-219ENST00000641476 SP8Q8IXZ3 490 aa18.88■□□□□ 0.61
SRRT-219ENST00000641476 TRIM28Q13263 835 aaKnown RBP18.87■□□□□ 0.61
SRRT-219ENST00000641476 RGMBQ6NW40 437 aa18.87■□□□□ 0.61
SRRT-219ENST00000641476 RIC3Q7Z5B4 369 aa18.87■□□□□ 0.61
SRRT-219ENST00000641476 YDJCA8MPS7 323 aa18.86■□□□□ 0.61
SRRT-219ENST00000641476 FAM155AB1AL88 458 aaPredicted RBP18.86■□□□□ 0.61
SRRT-219ENST00000641476 RTL5Q5HYW3 569 aaPredicted RBP18.86■□□□□ 0.61
SRRT-219ENST00000641476 TMC4Q7Z404 712 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms