RNA–Protein interactions for RNA: ENST00000640773.1

KCNMA1-288, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-288ENST00000640773 USP16Q9Y5T5 823 aa10.65□□□□□ -0.7
KCNMA1-288ENST00000640773 GOLGB1Q14789 3259 aaKnown RBP10.65□□□□□ -0.7
KCNMA1-288ENST00000640773 FER1L6Q2WGJ9 1857 aa10.65□□□□□ -0.7
KCNMA1-288ENST00000640773 MYCNP04198 464 aaPredicted RBP10.65□□□□□ -0.7
KCNMA1-288ENST00000640773 TM4SF1P30408 202 aa10.65□□□□□ -0.7
KCNMA1-288ENST00000640773 FKBP5Q13451 457 aaPredicted RBP10.65□□□□□ -0.7
KCNMA1-288ENST00000640773 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.65□□□□□ -0.7
KCNMA1-288ENST00000640773 COL15A1P39059 1388 aa10.65□□□□□ -0.71
KCNMA1-288ENST00000640773 USP42Q9H9J4 1324 aaKnown RBP10.64□□□□□ -0.71
KCNMA1-288ENST00000640773 CTIFO43310 598 aaKnown RBP10.64□□□□□ -0.71
KCNMA1-288ENST00000640773 PTMAP06454 111 aaKnown RBP10.64□□□□□ -0.71
KCNMA1-288ENST00000640773 SNRPA1P09661 255 aaKnown RBP10.64□□□□□ -0.71
KCNMA1-288ENST00000640773 IL6STP40189 918 aaPredicted RBP10.64□□□□□ -0.71
KCNMA1-288ENST00000640773 PDE3AQ14432 1141 aa10.64□□□□□ -0.71
KCNMA1-288ENST00000640773 NOLC1Q14978 699 aaKnown RBP eCLIP10.64□□□□□ -0.71
KCNMA1-288ENST00000640773 DNAJC10Q8IXB1 793 aa10.64□□□□□ -0.71
KCNMA1-288ENST00000640773 SBF1O95248 1867 aa10.64□□□□□ -0.71
KCNMA1-288ENST00000640773 BRPF1P55201 1214 aaPredicted RBP10.64□□□□□ -0.71
KCNMA1-288ENST00000640773 SPTLC3Q9NUV7 552 aa10.64□□□□□ -0.71
KCNMA1-288ENST00000640773 FEZ2Q9UHY8 353 aaPredicted RBP10.64□□□□□ -0.71
KCNMA1-288ENST00000640773 DICER1Q9UPY3 1922 aaKnown RBP10.64□□□□□ -0.71
KCNMA1-288ENST00000640773 SLFN5Q08AF3 891 aa10.64□□□□□ -0.71
KCNMA1-288ENST00000640773 TEFQ10587 303 aa10.64□□□□□ -0.71
KCNMA1-288ENST00000640773 SYCP1Q15431 976 aa10.64□□□□□ -0.71
KCNMA1-288ENST00000640773 FLAD1Q8NFF5 587 aa10.64□□□□□ -0.71
KCNMA1-288ENST00000640773 RTF1Q92541 710 aaKnown RBP10.64□□□□□ -0.71
KCNMA1-288ENST00000640773 CCDC87Q9NVE4 849 aa10.63□□□□□ -0.71
KCNMA1-288ENST00000640773 DDX41Q9UJV9 622 aaKnown RBP10.63□□□□□ -0.71
KCNMA1-288ENST00000640773 MORC2Q9Y6X9 1032 aaPredicted RBP10.63□□□□□ -0.71
KCNMA1-288ENST00000640773 BAG4O95429 457 aaKnown RBP10.63□□□□□ -0.71
KCNMA1-288ENST00000640773 GOLGA2Q08379 1002 aa10.63□□□□□ -0.71
KCNMA1-288ENST00000640773 ARHGEF1Q92888 912 aaKnown RBP10.63□□□□□ -0.71
KCNMA1-288ENST00000640773 SYTL4Q96C24 671 aaPredicted RBP10.63□□□□□ -0.71
KCNMA1-288ENST00000640773 SNED1Q8TER0 1413 aa10.62□□□□□ -0.71
KCNMA1-288ENST00000640773 GNAI1P63096 354 aa10.62□□□□□ -0.71
KCNMA1-288ENST00000640773 CTR9Q6PD62 1173 aa10.62□□□□□ -0.71
KCNMA1-288ENST00000640773 MIS18AQ9NYP9 233 aa10.62□□□□□ -0.71
KCNMA1-288ENST00000640773 CTNNA3Q9UI47 895 aa10.62□□□□□ -0.71
KCNMA1-288ENST00000640773 COL4A1P02462 1669 aa10.62□□□□□ -0.71
KCNMA1-288ENST00000640773 CACNA1SQ13698 1873 aa10.62□□□□□ -0.71
KCNMA1-288ENST00000640773 GYS1P13807 737 aa10.62□□□□□ -0.71
KCNMA1-288ENST00000640773 CHAF1AQ13111 956 aaPredicted RBP10.62□□□□□ -0.71
KCNMA1-288ENST00000640773 CAVIN1Q6NZI2 390 aaKnown RBP10.62□□□□□ -0.71
KCNMA1-288ENST00000640773 ZBTB1Q9Y2K1 713 aa10.62□□□□□ -0.71
KCNMA1-288ENST00000640773 CAMTA2O94983 1202 aa10.61□□□□□ -0.71
KCNMA1-288ENST00000640773 LRSAM1Q6UWE0 723 aa10.61□□□□□ -0.71
KCNMA1-288ENST00000640773 C8orf58Q8NAV2 365 aa10.61□□□□□ -0.71
KCNMA1-288ENST00000640773 MTFR1LQ9H019 292 aa10.61□□□□□ -0.71
KCNMA1-288ENST00000640773 NARFQ9UHQ1 456 aa10.61□□□□□ -0.71
KCNMA1-288ENST00000640773 VAMP4O75379 141 aa10.6□□□□□ -0.71
KCNMA1-288ENST00000640773 TNNT3P45378 269 aaPredicted RBP10.6□□□□□ -0.71
KCNMA1-288ENST00000640773 R3HDM1Q15032 1099 aaKnown RBP10.6□□□□□ -0.71
KCNMA1-288ENST00000640773 STK32BQ9NY57 414 aa10.6□□□□□ -0.71
KCNMA1-288ENST00000640773 FAM177BA6PVY3 158 aa10.6□□□□□ -0.71
KCNMA1-288ENST00000640773 PDZRN3Q9UPQ7 1066 aa10.6□□□□□ -0.71
KCNMA1-288ENST00000640773 KLRG2A4D1S0 409 aaPredicted RBP10.6□□□□□ -0.71
KCNMA1-288ENST00000640773 ERVV-1B6SEH8 477 aa10.59□□□□□ -0.71
KCNMA1-288ENST00000640773 KRT24Q2M2I5 525 aa10.59□□□□□ -0.71
KCNMA1-288ENST00000640773 TSPYL6Q8N831 410 aa10.59□□□□□ -0.71
KCNMA1-288ENST00000640773 CHMP4CQ96CF2 233 aa10.59□□□□□ -0.71
KCNMA1-288ENST00000640773 MYCBPQ99417 103 aaPredicted RBP10.59□□□□□ -0.71
KCNMA1-288ENST00000640773 CHD4Q14839 1912 aa10.59□□□□□ -0.71
KCNMA1-288ENST00000640773 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.59□□□□□ -0.71
KCNMA1-288ENST00000640773 PTCD1O75127 700 aaKnown RBP10.59□□□□□ -0.71
KCNMA1-288ENST00000640773 GRIPAP1Q4V328 841 aa10.59□□□□□ -0.71
KCNMA1-288ENST00000640773 KRT222Q8N1A0 295 aa10.59□□□□□ -0.71
KCNMA1-288ENST00000640773 TSPYL4Q9UJ04 414 aa10.59□□□□□ -0.71
KCNMA1-288ENST00000640773 PSME4Q14997 1843 aa10.59□□□□□ -0.71
KCNMA1-288ENST00000640773 CLEC4GQ6UXB4 293 aa10.59□□□□□ -0.71
KCNMA1-288ENST00000640773 LOC102724159A0A0B4J2E5 919 aa10.58□□□□□ -0.72
KCNMA1-288ENST00000640773 NOP2P46087 812 aaKnown RBP10.58□□□□□ -0.72
KCNMA1-288ENST00000640773 PWP2Q15269 919 aaKnown RBP10.58□□□□□ -0.72
KCNMA1-288ENST00000640773 ZBTB9Q96C00 473 aa10.58□□□□□ -0.72
KCNMA1-288ENST00000640773 LMBRD1Q9NUN5 540 aa10.58□□□□□ -0.72
KCNMA1-288ENST00000640773 RIOK3O14730 519 aaKnown RBP10.58□□□□□ -0.72
KCNMA1-288ENST00000640773 STARD3NLO95772 234 aa10.58□□□□□ -0.72
KCNMA1-288ENST00000640773 A1BGP04217 495 aa10.58□□□□□ -0.72
KCNMA1-288ENST00000640773 TTC5Q8N0Z6 440 aa10.58□□□□□ -0.72
KCNMA1-288ENST00000640773 NCAPGQ9BPX3 1015 aa10.58□□□□□ -0.72
KCNMA1-288ENST00000640773 PROSER3Q2NL68 480 aa10.57□□□□□ -0.72
KCNMA1-288ENST00000640773 CEP120Q8N960 986 aa10.57□□□□□ -0.72
KCNMA1-288ENST00000640773 DDX21Q9NR30 783 aaKnown RBP eCLIP10.57□□□□□ -0.72
KCNMA1-288ENST00000640773 TAF1P21675 1872 aa10.57□□□□□ -0.72
KCNMA1-288ENST00000640773 POLRMTO00411 1230 aaKnown RBP10.57□□□□□ -0.72
KCNMA1-288ENST00000640773 GTF2A1P52655 376 aaPredicted RBP10.57□□□□□ -0.72
KCNMA1-288ENST00000640773 SMIM5Q71RC9 77 aa10.57□□□□□ -0.72
KCNMA1-288ENST00000640773 ADCY9O60503 1353 aa10.57□□□□□ -0.72
KCNMA1-288ENST00000640773 ZNF34Q8IZ26 560 aa10.57□□□□□ -0.72
KCNMA1-288ENST00000640773 RBM42Q9BTD8 480 aaKnown RBP10.57□□□□□ -0.72
KCNMA1-288ENST00000640773 BRMS1Q9HCU9 246 aa10.57□□□□□ -0.72
KCNMA1-288ENST00000640773 RTCBQ9Y3I0 505 aaKnown RBP10.57□□□□□ -0.72
KCNMA1-288ENST00000640773 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.56□□□□□ -0.72
KCNMA1-288ENST00000640773 K7ELQ4 463 aaPredicted RBP10.56□□□□□ -0.72
KCNMA1-288ENST00000640773 GNPATO15228 680 aa10.56□□□□□ -0.72
KCNMA1-288ENST00000640773 CT47B1P0C2W7 299 aaPredicted RBP10.56□□□□□ -0.72
KCNMA1-288ENST00000640773 NCBP1Q09161 790 aaKnown RBP10.56□□□□□ -0.72
KCNMA1-288ENST00000640773 TRAPPC3LQ5T215 181 aa10.56□□□□□ -0.72
KCNMA1-288ENST00000640773 SLX4Q8IY92 1834 aa10.56□□□□□ -0.72
KCNMA1-288ENST00000640773 PHF14O94880 888 aa10.56□□□□□ -0.72
KCNMA1-288ENST00000640773 DDR1Q08345 913 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms