RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 IRS1P35568 1242 aa1.08□□□□□ -2.24
CCDC7-215ENST00000639629 SFSWAPQ12872 951 aaKnown RBP1.08□□□□□ -2.24
CCDC7-215ENST00000639629 EML3Q32P44 896 aa1.08□□□□□ -2.24
CCDC7-215ENST00000639629 COX20Q5RI15 118 aa1.08□□□□□ -2.24
CCDC7-215ENST00000639629 KIAA1211Q6ZU35 1233 aa1.08□□□□□ -2.24
CCDC7-215ENST00000639629 KRTAP5-5Q701N2 237 aaPredicted RBP1.08□□□□□ -2.24
CCDC7-215ENST00000639629 ABHD17AQ96GS6 310 aa1.08□□□□□ -2.24
CCDC7-215ENST00000639629 CXXC1Q9P0U4 656 aaPredicted RBP1.08□□□□□ -2.24
CCDC7-215ENST00000639629 PRR36Q9H6K5 1346 aa1.08□□□□□ -2.24
CCDC7-215ENST00000639629 MED26O95402 600 aa1.08□□□□□ -2.24
CCDC7-215ENST00000639629 CEBPAP49715 358 aaPredicted RBP1.08□□□□□ -2.24
CCDC7-215ENST00000639629 MCTP1Q6DN14 999 aa1.08□□□□□ -2.24
CCDC7-215ENST00000639629 L3MBTL2Q969R5 705 aa1.08□□□□□ -2.24
CCDC7-215ENST00000639629 GTPBP3Q969Y2 492 aaKnown RBP1.08□□□□□ -2.24
CCDC7-215ENST00000639629 ATAD2Q6PL18 1390 aa1.08□□□□□ -2.24
CCDC7-215ENST00000639629 IGF2BP3O00425 579 aaKnown RBP eCLIP1.08□□□□□ -2.24
CCDC7-215ENST00000639629 AP1G2O75843 785 aa1.08□□□□□ -2.24
CCDC7-215ENST00000639629 STAU1O95793 577 aaKnown RBP1.08□□□□□ -2.24
CCDC7-215ENST00000639629 CTHP32929 405 aa1.08□□□□□ -2.24
CCDC7-215ENST00000639629 ATP1A2P50993 1020 aa1.08□□□□□ -2.24
CCDC7-215ENST00000639629 TBC1D9Q6ZT07 1266 aa1.08□□□□□ -2.24
CCDC7-215ENST00000639629 SLC9A9Q8IVB4 645 aa1.08□□□□□ -2.24
CCDC7-215ENST00000639629 KRI1Q8N9T8 703 aaKnown RBP1.08□□□□□ -2.24
CCDC7-215ENST00000639629 KRTAP4-4Q9BYR3 166 aa1.08□□□□□ -2.24
CCDC7-215ENST00000639629 PPP1R12CQ9BZL4 782 aa1.08□□□□□ -2.24
CCDC7-215ENST00000639629 POLR3EQ9NVU0 708 aa1.08□□□□□ -2.24
CCDC7-215ENST00000639629 PCDHB11Q9Y5F2 797 aa1.08□□□□□ -2.24
CCDC7-215ENST00000639629 USP17L5A8MUK1 530 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 PTCD1O75127 700 aaKnown RBP1.07□□□□□ -2.24
CCDC7-215ENST00000639629 ALBP02768 609 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 SSFA2P28290 1259 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 PDE12Q6L8Q7 609 aaKnown RBP1.07□□□□□ -2.24
CCDC7-215ENST00000639629 SYT9Q86SS6 491 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 NLRP3Q96P20 1036 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 SERTM1A2A2V5 107 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 USP17L3A6NCW0 530 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 USP17L4A6NCW7 530 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 HRKO00198 91 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 KRT1P04264 644 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 MESP2Q0VG99 397 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 GNASQ5JWF2 1037 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 USP17L2Q6R6M4 530 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 USP17L1Q7RTZ2 530 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 PLVAPQ9BX97 442 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 SPDYE3A6NKU9 549 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 NUTM2BA6NNL0 878 aaPredicted RBP1.07□□□□□ -2.24
CCDC7-215ENST00000639629 NUTM2EB1AL46 878 aaPredicted RBP1.07□□□□□ -2.24
CCDC7-215ENST00000639629 USP17L15C9J2P7 530 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 USP17L10C9JJH3 530 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 USP17L13C9JLJ4 530 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 USP17L12C9JPN9 530 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 USP17L11C9JVI0 530 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 USP17L21D6R901 530 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 USP17L18D6R9N7 530 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 USP17L22D6RA61 530 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 USP17L17D6RBQ6 530 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 USP17L19D6RCP7 530 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 USP17L20D6RJB6 530 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 ONECUT2O95948 504 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 MARSP56192 900 aaKnown RBP1.07□□□□□ -2.24
CCDC7-215ENST00000639629 PLAURQ03405 335 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 USP17L24Q0WX57 530 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 NUTM2DQ5VT03 806 aaPredicted RBP1.07□□□□□ -2.24
CCDC7-215ENST00000639629 VN1R5Q7Z5H4 357 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 PDZD3Q86UT5 571 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 CLEC10AQ8IUN9 316 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 NUTM2AQ8IVF1 878 aaPredicted RBP1.07□□□□□ -2.24
CCDC7-215ENST00000639629 ZNF280CQ8ND82 737 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 PMEPA1Q969W9 287 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 CYLDQ9NQC7 956 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 CNOT11Q9UKZ1 510 aaKnown RBP1.07□□□□□ -2.24
CCDC7-215ENST00000639629 NOD1Q9Y239 953 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 GTF3C5Q9Y5Q8 519 aaPredicted RBP1.07□□□□□ -2.24
CCDC7-215ENST00000639629 PITPNM2Q9BZ72 1349 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 AOC2O75106 756 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 INTS5Q6P9B9 1019 aaKnown RBP1.07□□□□□ -2.24
CCDC7-215ENST00000639629 GALNT12Q8IXK2 581 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 SERBP1Q8NC51 408 aaKnown RBP eCLIP1.07□□□□□ -2.24
CCDC7-215ENST00000639629 FLAD1Q8NFF5 587 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 WFDC12Q8WWY7 111 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 ARHGEF10LQ9HCE6 1279 aa1.07□□□□□ -2.24
CCDC7-215ENST00000639629 POLMQ9NP87 494 aaPredicted RBP1.07□□□□□ -2.24
CCDC7-215ENST00000639629 FZD6O60353 706 aa1.06□□□□□ -2.24
CCDC7-215ENST00000639629 MICAL2O94851 1124 aa1.06□□□□□ -2.24
CCDC7-215ENST00000639629 MYCP01106 439 aaPredicted RBP1.06□□□□□ -2.24
CCDC7-215ENST00000639629 JAG1P78504 1218 aa1.06□□□□□ -2.24
CCDC7-215ENST00000639629 TRIP4Q15650 581 aaPredicted RBP1.06□□□□□ -2.24
CCDC7-215ENST00000639629 SIAH1Q8IUQ4 282 aa1.06□□□□□ -2.24
CCDC7-215ENST00000639629 ANKMY2Q8IV38 441 aa1.06□□□□□ -2.24
CCDC7-215ENST00000639629 ALDH16A1Q8IZ83 802 aa1.06□□□□□ -2.24
CCDC7-215ENST00000639629 SVOPQ8N4V2 548 aa1.06□□□□□ -2.24
CCDC7-215ENST00000639629 TCF12Q99081 682 aa1.06□□□□□ -2.24
CCDC7-215ENST00000639629 MRPL18Q9H0U6 180 aaKnown RBP1.06□□□□□ -2.24
CCDC7-215ENST00000639629 IGLV1-40P01703 118 aa1.06□□□□□ -2.24
CCDC7-215ENST00000639629 RPLP1P05386 114 aaKnown RBP1.06□□□□□ -2.24
CCDC7-215ENST00000639629 MED14OSP0DP75 135 aa1.06□□□□□ -2.24
CCDC7-215ENST00000639629 FSTP19883 344 aa1.06□□□□□ -2.24
CCDC7-215ENST00000639629 TESK1Q15569 626 aa1.06□□□□□ -2.24
CCDC7-215ENST00000639629 KIF4BQ2VIQ3 1234 aa1.06□□□□□ -2.24
CCDC7-215ENST00000639629 NLRP13Q86W25 1043 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms