RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 SNX29Q8TEQ0 813 aa10.54□□□□□ -0.72
FAM49B-230ENST00000639004 GIPC2Q8TF65 315 aa10.54□□□□□ -0.72
FAM49B-230ENST00000639004 ZNF428Q96B54 188 aa10.54□□□□□ -0.72
FAM49B-230ENST00000639004 GAS6Q14393 721 aa10.53□□□□□ -0.72
FAM49B-230ENST00000639004 ENOX2Q16206 610 aaKnown RBP10.53□□□□□ -0.72
FAM49B-230ENST00000639004 RAB44Q7Z6P3 723 aaPredicted RBP10.53□□□□□ -0.72
FAM49B-230ENST00000639004 CSRNP1Q96S65 589 aa10.53□□□□□ -0.72
FAM49B-230ENST00000639004 ABI2Q9NYB9 513 aaPredicted RBP10.53□□□□□ -0.72
FAM49B-230ENST00000639004 ZFATQ9P243 1243 aa10.53□□□□□ -0.72
FAM49B-230ENST00000639004 NEFLP07196 543 aa10.52□□□□□ -0.73
FAM49B-230ENST00000639004 ZNF16P17020 682 aaPredicted RBP10.52□□□□□ -0.73
FAM49B-230ENST00000639004 NFKB1P19838 968 aa10.52□□□□□ -0.73
FAM49B-230ENST00000639004 PNMA5Q96PV4 448 aa10.52□□□□□ -0.73
FAM49B-230ENST00000639004 EFCC1Q9HA90 598 aa10.52□□□□□ -0.73
FAM49B-230ENST00000639004 CNTN3Q9P232 1028 aa10.52□□□□□ -0.73
FAM49B-230ENST00000639004 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.52□□□□□ -0.73
FAM49B-230ENST00000639004 PNMA6FA0A0J9YX94 578 aa10.51□□□□□ -0.73
FAM49B-230ENST00000639004 C2CD2LO14523 706 aa10.51□□□□□ -0.73
FAM49B-230ENST00000639004 EIF1AYO14602 144 aaKnown RBP10.51□□□□□ -0.73
FAM49B-230ENST00000639004 TERTO14746 1132 aaKnown RBP10.51□□□□□ -0.73
FAM49B-230ENST00000639004 VSIG8P0DPA2 414 aa10.51□□□□□ -0.73
FAM49B-230ENST00000639004 RARAP10276 462 aa10.51□□□□□ -0.73
FAM49B-230ENST00000639004 BHMTQ93088 406 aa10.51□□□□□ -0.73
FAM49B-230ENST00000639004 CHRDQ9H2X0 955 aa10.51□□□□□ -0.73
FAM49B-230ENST00000639004 WWC3Q9ULE0 1092 aa10.51□□□□□ -0.73
FAM49B-230ENST00000639004 MMP20O60882 483 aa10.5□□□□□ -0.73
FAM49B-230ENST00000639004 CPNE3O75131 537 aaKnown RBP10.5□□□□□ -0.73
FAM49B-230ENST00000639004 PHACTR2O75167 634 aa10.5□□□□□ -0.73
FAM49B-230ENST00000639004 LDHBP07195 334 aaKnown RBP10.5□□□□□ -0.73
FAM49B-230ENST00000639004 TTC39BQ5VTQ0 682 aaPredicted RBP10.5□□□□□ -0.73
FAM49B-230ENST00000639004 C1orf127Q8N9H9 656 aa10.5□□□□□ -0.73
FAM49B-230ENST00000639004 SETDB2Q96T68 719 aa10.5□□□□□ -0.73
FAM49B-230ENST00000639004 DNAJC25Q9H1X3 360 aa10.5□□□□□ -0.73
FAM49B-230ENST00000639004 ZFYVE28Q9HCC9 887 aa10.5□□□□□ -0.73
FAM49B-230ENST00000639004 BMP4P12644 408 aa10.49□□□□□ -0.73
FAM49B-230ENST00000639004 MX2P20592 715 aa10.49□□□□□ -0.73
FAM49B-230ENST00000639004 USPL1Q5W0Q7 1092 aa10.49□□□□□ -0.73
FAM49B-230ENST00000639004 MAP3K6O95382 1288 aa10.48□□□□□ -0.73
FAM49B-230ENST00000639004 CYP2E1P05181 493 aaPredicted RBP10.48□□□□□ -0.73
FAM49B-230ENST00000639004 RBM25P49756 843 aaKnown RBP10.48□□□□□ -0.73
FAM49B-230ENST00000639004 ZNF326Q5BKZ1 582 aaKnown RBP10.48□□□□□ -0.73
FAM49B-230ENST00000639004 OR13H1Q8NG92 308 aa10.48□□□□□ -0.73
FAM49B-230ENST00000639004 ERBB4Q15303 1308 aa10.48□□□□□ -0.73
FAM49B-230ENST00000639004 PRPF40AO75400 957 aaKnown RBP10.47□□□□□ -0.73
FAM49B-230ENST00000639004 ATP2B2Q01814 1243 aa10.47□□□□□ -0.73
FAM49B-230ENST00000639004 NEUROD1Q13562 356 aa10.47□□□□□ -0.73
FAM49B-230ENST00000639004 MBIPQ9NS73 344 aa10.47□□□□□ -0.73
FAM49B-230ENST00000639004 TLR7Q9NYK1 1049 aaKnown RBP10.47□□□□□ -0.73
FAM49B-230ENST00000639004 PRR12Q9ULL5 1215 aa10.47□□□□□ -0.73
FAM49B-230ENST00000639004 EREGO14944 169 aa10.46□□□□□ -0.73
FAM49B-230ENST00000639004 NFX1Q12986 1120 aaKnown RBP10.46□□□□□ -0.73
FAM49B-230ENST00000639004 ZNF468Q5VIY5 522 aaPredicted RBP10.46□□□□□ -0.73
FAM49B-230ENST00000639004 SLC16A10Q8TF71 515 aa10.46□□□□□ -0.73
FAM49B-230ENST00000639004 UNCXA6NJT0 531 aa10.45□□□□□ -0.74
FAM49B-230ENST00000639004 CES1P23141 567 aa10.45□□□□□ -0.74
FAM49B-230ENST00000639004 RNFT1Q5M7Z0 435 aa10.45□□□□□ -0.74
FAM49B-230ENST00000639004 ALG1LQ6GMV1 187 aa10.45□□□□□ -0.74
FAM49B-230ENST00000639004 DHX32Q7L7V1 743 aaKnown RBP10.45□□□□□ -0.74
FAM49B-230ENST00000639004 NPM2Q86SE8 214 aaKnown RBP10.45□□□□□ -0.74
FAM49B-230ENST00000639004 SYT9Q86SS6 491 aa10.45□□□□□ -0.74
FAM49B-230ENST00000639004 PMEPA1Q969W9 287 aa10.45□□□□□ -0.74
FAM49B-230ENST00000639004 COL25A1Q9BXS0 654 aaPredicted RBP10.45□□□□□ -0.74
FAM49B-230ENST00000639004 KANSL3Q9P2N6 904 aa10.45□□□□□ -0.74
FAM49B-230ENST00000639004 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.45□□□□□ -0.74
FAM49B-230ENST00000639004 POLR3DP05423 398 aaPredicted RBP10.44□□□□□ -0.74
FAM49B-230ENST00000639004 PSAPP07602 524 aa10.44□□□□□ -0.74
FAM49B-230ENST00000639004 SOX18P35713 384 aa10.44□□□□□ -0.74
FAM49B-230ENST00000639004 FGD1P98174 961 aa10.44□□□□□ -0.74
FAM49B-230ENST00000639004 FBF1Q8TES7 1133 aa10.44□□□□□ -0.74
FAM49B-230ENST00000639004 CCDC74AQ96AQ1 378 aa10.44□□□□□ -0.74
FAM49B-230ENST00000639004 DUSP9Q99956 384 aaKnown RBP10.44□□□□□ -0.74
FAM49B-230ENST00000639004 AVENQ9NQS1 362 aaPredicted RBP10.44□□□□□ -0.74
FAM49B-230ENST00000639004 RNF19AQ9NV58 838 aa10.44□□□□□ -0.74
FAM49B-230ENST00000639004 PHF20L1A8MW92 1017 aa10.43□□□□□ -0.74
FAM49B-230ENST00000639004 SIN3BO75182 1162 aa10.43□□□□□ -0.74
FAM49B-230ENST00000639004 HOXD8P13378 290 aaPredicted RBP10.43□□□□□ -0.74
FAM49B-230ENST00000639004 PCBP4P57723 403 aaKnown RBP10.43□□□□□ -0.74
FAM49B-230ENST00000639004 KLF15Q9UIH9 416 aa10.43□□□□□ -0.74
FAM49B-230ENST00000639004 ARAFP10398 606 aa10.42□□□□□ -0.74
FAM49B-230ENST00000639004 MAP2K3P46734 347 aa10.42□□□□□ -0.74
FAM49B-230ENST00000639004 KRT76Q01546 638 aa10.42□□□□□ -0.74
FAM49B-230ENST00000639004 PLAURQ03405 335 aa10.42□□□□□ -0.74
FAM49B-230ENST00000639004 COL13A1Q5TAT6 717 aaPredicted RBP10.42□□□□□ -0.74
FAM49B-230ENST00000639004 GALNT12Q8IXK2 581 aa10.42□□□□□ -0.74
FAM49B-230ENST00000639004 IRF7Q92985 503 aa10.42□□□□□ -0.74
FAM49B-230ENST00000639004 SALL4Q9UJQ4 1053 aa10.42□□□□□ -0.74
FAM49B-230ENST00000639004 NSFL1CQ9UNZ2 370 aaKnown RBP10.42□□□□□ -0.74
FAM49B-230ENST00000639004 IGF1RP08069 1367 aa10.41□□□□□ -0.74
FAM49B-230ENST00000639004 KIF4AO95239 1232 aa10.41□□□□□ -0.74
FAM49B-230ENST00000639004 IRS1P35568 1242 aa10.41□□□□□ -0.74
FAM49B-230ENST00000639004 NRLP54845 237 aa10.41□□□□□ -0.74
FAM49B-230ENST00000639004 ZNF775Q96BV0 537 aaPredicted RBP10.41□□□□□ -0.74
FAM49B-230ENST00000639004 NPHS2Q9NP85 383 aa10.41□□□□□ -0.74
FAM49B-230ENST00000639004 PARP2Q9UGN5 583 aa10.41□□□□□ -0.74
FAM49B-230ENST00000639004 ZBTB42B2RXF5 422 aa10.4□□□□□ -0.74
FAM49B-230ENST00000639004 GPLD1P80108 840 aa10.4□□□□□ -0.74
FAM49B-230ENST00000639004 PI16Q6UXB8 463 aa10.4□□□□□ -0.74
FAM49B-230ENST00000639004 TRPM4Q8TD43 1214 aa10.4□□□□□ -0.74
FAM49B-230ENST00000639004 EPS8L3Q8TE67 593 aaKnown RBP10.4□□□□□ -0.74
FAM49B-230ENST00000639004 TNFRSF25Q93038 417 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms