RNA–Protein interactions for RNA: ENST00000638848.1

KCNMA1-246, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-246ENST00000638848 SF3A1Q15459 793 aaKnown RBP13.4□□□□□ -0.26
KCNMA1-246ENST00000638848 GTF3C6Q969F1 213 aa13.4□□□□□ -0.26
KCNMA1-246ENST00000638848 EVI5LQ96CN4 794 aa13.4□□□□□ -0.26
KCNMA1-246ENST00000638848 SPTLC3Q9NUV7 552 aa13.4□□□□□ -0.26
KCNMA1-246ENST00000638848 TOB2Q14106 344 aaPredicted RBP13.4□□□□□ -0.26
KCNMA1-246ENST00000638848 NECTIN1Q15223 517 aa13.4□□□□□ -0.26
KCNMA1-246ENST00000638848 ESCO1Q5FWF5 840 aa13.4□□□□□ -0.26
KCNMA1-246ENST00000638848 C1orf141Q5JVX7 400 aa13.4□□□□□ -0.27
KCNMA1-246ENST00000638848 EPHA10Q5JZY3 1008 aa13.4□□□□□ -0.27
KCNMA1-246ENST00000638848 HOMER1Q86YM7 354 aa13.4□□□□□ -0.27
KCNMA1-246ENST00000638848 CCAR2Q8N163 923 aaKnown RBP13.4□□□□□ -0.27
KCNMA1-246ENST00000638848 SH2B1Q9NRF2 756 aaPredicted RBP13.4□□□□□ -0.27
KCNMA1-246ENST00000638848 MAP3K5Q99683 1374 aa13.39□□□□□ -0.27
KCNMA1-246ENST00000638848 POLA2Q14181 598 aa13.39□□□□□ -0.27
KCNMA1-246ENST00000638848 RNF20Q5VTR2 975 aa13.39□□□□□ -0.27
KCNMA1-246ENST00000638848 ZSCAN31Q96LW9 406 aaPredicted RBP13.39□□□□□ -0.27
KCNMA1-246ENST00000638848 PPP6R1Q9UPN7 881 aa13.39□□□□□ -0.27
KCNMA1-246ENST00000638848 KIF20BQ96Q89 1820 aa13.39□□□□□ -0.27
KCNMA1-246ENST00000638848 CCDC69A6NI79 296 aa13.39□□□□□ -0.27
KCNMA1-246ENST00000638848 RXRAP19793 462 aa13.39□□□□□ -0.27
KCNMA1-246ENST00000638848 PSMA5P28066 241 aa13.39□□□□□ -0.27
KCNMA1-246ENST00000638848 TMEM87AQ8NBN3 555 aa13.39□□□□□ -0.27
KCNMA1-246ENST00000638848 LRRN4CLQ8ND94 238 aa13.39□□□□□ -0.27
KCNMA1-246ENST00000638848 ZC3H6P61129 1189 aaKnown RBP13.39□□□□□ -0.27
KCNMA1-246ENST00000638848 PTPN14Q15678 1187 aa13.39□□□□□ -0.27
KCNMA1-246ENST00000638848 UBE3BQ7Z3V4 1068 aa13.39□□□□□ -0.27
KCNMA1-246ENST00000638848 EPC1Q9H2F5 836 aa13.39□□□□□ -0.27
KCNMA1-246ENST00000638848 A2ML1A8K2U0 1454 aa13.38□□□□□ -0.27
KCNMA1-246ENST00000638848 RPS6KB1P23443 525 aa13.38□□□□□ -0.27
KCNMA1-246ENST00000638848 TFCP2Q12800 502 aa13.38□□□□□ -0.27
KCNMA1-246ENST00000638848 HSP90AB4PQ58FF6 505 aa13.38□□□□□ -0.27
KCNMA1-246ENST00000638848 FSIP1Q8NA03 581 aa13.38□□□□□ -0.27
KCNMA1-246ENST00000638848 GOLIM4O00461 696 aa13.38□□□□□ -0.27
KCNMA1-246ENST00000638848 KDM4FA0A1W2PPD8 638 aa13.38□□□□□ -0.27
KCNMA1-246ENST00000638848 POLR3GO15318 223 aaPredicted RBP13.38□□□□□ -0.27
KCNMA1-246ENST00000638848 KINO60870 393 aaKnown RBP13.38□□□□□ -0.27
KCNMA1-246ENST00000638848 PSME1Q06323 249 aa13.38□□□□□ -0.27
KCNMA1-246ENST00000638848 TTLL5Q6EMB2 1281 aa13.38□□□□□ -0.27
KCNMA1-246ENST00000638848 CCDC73Q6ZRK6 1079 aa13.38□□□□□ -0.27
KCNMA1-246ENST00000638848 GOLPH3LQ9H4A5 285 aa13.38□□□□□ -0.27
KCNMA1-246ENST00000638848 NEK1Q96PY6 1258 aa13.38□□□□□ -0.27
KCNMA1-246ENST00000638848 DBNDD2Q9BQY9 259 aa13.38□□□□□ -0.27
KCNMA1-246ENST00000638848 IGSF1Q8N6C5 1336 aa13.37□□□□□ -0.27
KCNMA1-246ENST00000638848 SCAND2PQ9GZW5 306 aaPredicted RBP13.37□□□□□ -0.27
KCNMA1-246ENST00000638848 NEURL4Q96JN8 1562 aa13.37□□□□□ -0.27
KCNMA1-246ENST00000638848 TMC6Q7Z403 805 aa13.37□□□□□ -0.27
KCNMA1-246ENST00000638848 USP28Q96RU2 1077 aa13.37□□□□□ -0.27
KCNMA1-246ENST00000638848 PDCP20941 246 aa13.37□□□□□ -0.27
KCNMA1-246ENST00000638848 TIMM10P62072 90 aa13.37□□□□□ -0.27
KCNMA1-246ENST00000638848 CLSTN2Q9H4D0 955 aa13.37□□□□□ -0.27
KCNMA1-246ENST00000638848 GRM8O00222 908 aa13.36□□□□□ -0.27
KCNMA1-246ENST00000638848 USP6P35125 1406 aa13.36□□□□□ -0.27
KCNMA1-246ENST00000638848 TMEM131LA2VDJ0 1609 aa13.36□□□□□ -0.27
KCNMA1-246ENST00000638848 LMOD1P29536 600 aaPredicted RBP13.36□□□□□ -0.27
KCNMA1-246ENST00000638848 MARCKSP29966 332 aaPredicted RBP13.36□□□□□ -0.27
KCNMA1-246ENST00000638848 SCRN1Q12765 414 aa13.36□□□□□ -0.27
KCNMA1-246ENST00000638848 SYT10Q6XYQ8 523 aa13.36□□□□□ -0.27
KCNMA1-246ENST00000638848 ZSWIM4Q9H7M6 989 aa13.36□□□□□ -0.27
KCNMA1-246ENST00000638848 ATP2B1P20020 1258 aa13.36□□□□□ -0.27
KCNMA1-246ENST00000638848 MAP4K1Q92918 833 aa13.36□□□□□ -0.27
KCNMA1-246ENST00000638848 DIP2CQ9Y2E4 1556 aa13.36□□□□□ -0.27
KCNMA1-246ENST00000638848 FKBP4Q02790 459 aaKnown RBP eCLIP13.36□□□□□ -0.27
KCNMA1-246ENST00000638848 ERCC6LQ2NKX8 1250 aa13.36□□□□□ -0.27
KCNMA1-246ENST00000638848 COPS6Q7L5N1 327 aa13.36□□□□□ -0.27
KCNMA1-246ENST00000638848 DBF4Q9UBU7 674 aaPredicted RBP13.36□□□□□ -0.27
KCNMA1-246ENST00000638848 KCNA6P17658 529 aa13.35□□□□□ -0.27
KCNMA1-246ENST00000638848 XAGE3Q8WTP9 111 aa13.35□□□□□ -0.27
KCNMA1-246ENST00000638848 GNL2Q13823 731 aaKnown RBP13.35□□□□□ -0.27
KCNMA1-246ENST00000638848 SBNO1A3KN83 1393 aa13.35□□□□□ -0.27
KCNMA1-246ENST00000638848 SSH2Q76I76 1423 aa13.35□□□□□ -0.27
KCNMA1-246ENST00000638848 CREBRFQ8IUR6 639 aa13.35□□□□□ -0.27
KCNMA1-246ENST00000638848 ADCY9O60503 1353 aa13.35□□□□□ -0.27
KCNMA1-246ENST00000638848 NPHP3Q7Z494 1330 aa13.34□□□□□ -0.27
KCNMA1-246ENST00000638848 CYP21A2P08686 494 aa13.34□□□□□ -0.27
KCNMA1-246ENST00000638848 SKIDA1Q1XH10 827 aa13.34□□□□□ -0.27
KCNMA1-246ENST00000638848 LRRC8AQ8IWT6 810 aa13.34□□□□□ -0.27
KCNMA1-246ENST00000638848 CHMP4CQ96CF2 233 aa13.34□□□□□ -0.27
KCNMA1-246ENST00000638848 ZNF594Q96JF6 807 aaPredicted RBP13.34□□□□□ -0.27
KCNMA1-246ENST00000638848 DLC1Q96QB1 1528 aa13.34□□□□□ -0.27
KCNMA1-246ENST00000638848 PTPDC1A2A3K4 754 aa13.34□□□□□ -0.27
KCNMA1-246ENST00000638848 KMT5BQ4FZB7 885 aa13.34□□□□□ -0.27
KCNMA1-246ENST00000638848 CCDC82Q8N4S0 544 aa13.34□□□□□ -0.27
KCNMA1-246ENST00000638848 DDX19AQ9NUU7 478 aaKnown RBP13.34□□□□□ -0.27
KCNMA1-246ENST00000638848 IFNKQ9P0W0 207 aa13.34□□□□□ -0.27
KCNMA1-246ENST00000638848 DBNLQ9UJU6 430 aaKnown RBP13.34□□□□□ -0.27
KCNMA1-246ENST00000638848 ARHGAP31Q2M1Z3 1444 aa13.34□□□□□ -0.27
KCNMA1-246ENST00000638848 WASHC4Q2M389 1173 aa13.33□□□□□ -0.27
KCNMA1-246ENST00000638848 SPECC1Q5M775 1068 aa13.33□□□□□ -0.27
KCNMA1-246ENST00000638848 KAZALD1Q96I82 304 aa13.33□□□□□ -0.27
KCNMA1-246ENST00000638848 PLEKHG3A1L390 1219 aa13.33□□□□□ -0.28
KCNMA1-246ENST00000638848 SMTNL1A8MU46 457 aa13.33□□□□□ -0.28
KCNMA1-246ENST00000638848 FBXO38Q6PIJ6 1188 aa13.33□□□□□ -0.28
KCNMA1-246ENST00000638848 NLRP2Q9NX02 1062 aa13.33□□□□□ -0.28
KCNMA1-246ENST00000638848 TTC41PQ6P2S7 1318 aa13.33□□□□□ -0.28
KCNMA1-246ENST00000638848 ARHGEF10O15013 1369 aa13.33□□□□□ -0.28
KCNMA1-246ENST00000638848 KSR2Q6VAB6 950 aa13.33□□□□□ -0.28
KCNMA1-246ENST00000638848 PDILTQ8N807 584 aa13.33□□□□□ -0.28
KCNMA1-246ENST00000638848 GTF2F1P35269 517 aaKnown RBP eCLIP13.33□□□□□ -0.28
KCNMA1-246ENST00000638848 TAF5LO75529 589 aa13.32□□□□□ -0.28
KCNMA1-246ENST00000638848 CSB-PGBD3P0DP91 1061 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms