RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 ZNF589Q86UQ0 364 aaPredicted RBP22.19■■□□□ 1.14
CTSD-212ENST00000637815 TEX13AQ9BXU3 409 aaPredicted RBP22.19■■□□□ 1.14
CTSD-212ENST00000637815 SPEF2Q9C093 1822 aa22.19■■□□□ 1.14
CTSD-212ENST00000637815 ZSCAN23Q3MJ62 389 aa22.19■■□□□ 1.14
CTSD-212ENST00000637815 RNF20Q5VTR2 975 aa22.19■■□□□ 1.14
CTSD-212ENST00000637815 BTG4Q9NY30 223 aa22.19■■□□□ 1.14
CTSD-212ENST00000637815 CHMP3Q9Y3E7 222 aa22.19■■□□□ 1.14
CTSD-212ENST00000637815 LARGE1O95461 756 aa22.18■■□□□ 1.14
CTSD-212ENST00000637815 PSMA5P28066 241 aa22.18■■□□□ 1.14
CTSD-212ENST00000637815 IL15P40933 162 aaPredicted RBP22.18■■□□□ 1.14
CTSD-212ENST00000637815 TSGA10IPQ3SY00 556 aa22.18■■□□□ 1.14
CTSD-212ENST00000637815 PIGBQ92521 554 aa22.18■■□□□ 1.14
CTSD-212ENST00000637815 HMG20BQ9P0W2 317 aa22.18■■□□□ 1.14
CTSD-212ENST00000637815 COL16A1Q07092 1604 aaPredicted RBP22.18■■□□□ 1.14
CTSD-212ENST00000637815 TAF5LO75529 589 aa22.18■■□□□ 1.14
CTSD-212ENST00000637815 NCLP19338 710 aaKnown RBP22.18■■□□□ 1.14
CTSD-212ENST00000637815 TRIM28Q13263 835 aaKnown RBP22.18■■□□□ 1.14
CTSD-212ENST00000637815 TCIRG1Q13488 830 aa22.18■■□□□ 1.14
CTSD-212ENST00000637815 USPL1Q5W0Q7 1092 aa22.18■■□□□ 1.14
CTSD-212ENST00000637815 ZNF609O15014 1411 aa22.17■■□□□ 1.14
CTSD-212ENST00000637815 ANKRD36CQ5JPF3 1778 aa22.17■■□□□ 1.14
CTSD-212ENST00000637815 CIAO1O76071 339 aa22.17■■□□□ 1.14
CTSD-212ENST00000637815 MBD3O95983 291 aa22.17■■□□□ 1.14
CTSD-212ENST00000637815 ASAP1Q9ULH1 1129 aa22.17■■□□□ 1.14
CTSD-212ENST00000637815 TICAM2Q86XR7 235 aa22.16■■□□□ 1.14
CTSD-212ENST00000637815 LARP6Q9BRS8 491 aaKnown RBP22.16■■□□□ 1.14
CTSD-212ENST00000637815 ROBO1Q9Y6N7 1651 aa22.16■■□□□ 1.14
CTSD-212ENST00000637815 EYA2O00167 538 aa22.16■■□□□ 1.14
CTSD-212ENST00000637815 PALLDQ8WX93 1383 aa22.16■■□□□ 1.14
CTSD-212ENST00000637815 ALDH8A1Q9H2A2 487 aaPredicted RBP22.16■■□□□ 1.14
CTSD-212ENST00000637815 SMC3Q9UQE7 1217 aa22.16■■□□□ 1.14
CTSD-212ENST00000637815 AHDC1Q5TGY3 1603 aaPredicted RBP22.15■■□□□ 1.14
CTSD-212ENST00000637815 KAT6BQ8WYB5 2073 aa22.15■■□□□ 1.14
CTSD-212ENST00000637815 MYH3P11055 1940 aa22.14■■□□□ 1.14
CTSD-212ENST00000637815 DNAJC10Q8IXB1 793 aa22.14■■□□□ 1.14
CTSD-212ENST00000637815 DNAJC2Q99543 621 aaKnown RBP22.14■■□□□ 1.14
CTSD-212ENST00000637815 BCL9O00512 1426 aa22.14■■□□□ 1.13
CTSD-212ENST00000637815 ZSCAN22P10073 491 aaPredicted RBP22.14■■□□□ 1.13
CTSD-212ENST00000637815 SYT1P21579 422 aa22.14■■□□□ 1.13
CTSD-212ENST00000637815 KBTBD3Q8NAB2 608 aa22.14■■□□□ 1.13
CTSD-212ENST00000637815 NDUFB9Q9Y6M9 179 aa22.14■■□□□ 1.13
CTSD-212ENST00000637815 STX6O43752 255 aa22.13■■□□□ 1.13
CTSD-212ENST00000637815 CCDC83Q8IWF9 413 aa22.13■■□□□ 1.13
CTSD-212ENST00000637815 SH3TC1Q8TE82 1336 aa22.13■■□□□ 1.13
CTSD-212ENST00000637815 STARD3NLO95772 234 aa22.13■■□□□ 1.13
CTSD-212ENST00000637815 ST3GAL1Q11201 340 aa22.13■■□□□ 1.13
CTSD-212ENST00000637815 ME3Q16798 604 aa22.13■■□□□ 1.13
CTSD-212ENST00000637815 LRRC24Q50LG9 513 aa22.13■■□□□ 1.13
CTSD-212ENST00000637815 BLOC1S2Q6QNY1 142 aa22.13■■□□□ 1.13
CTSD-212ENST00000637815 KIF6Q6ZMV9 814 aa22.13■■□□□ 1.13
CTSD-212ENST00000637815 PLA2G12BQ9BX93 195 aa22.13■■□□□ 1.13
CTSD-212ENST00000637815 TMEM63CQ9P1W3 806 aa22.13■■□□□ 1.13
CTSD-212ENST00000637815 NSFL1CQ9UNZ2 370 aaKnown RBP22.13■■□□□ 1.13
CTSD-212ENST00000637815 LAMA4Q16363 1823 aa22.12■■□□□ 1.13
CTSD-212ENST00000637815 PCCAP05165 728 aaPredicted RBP22.12■■□□□ 1.13
CTSD-212ENST00000637815 RPS6KB1P23443 525 aa22.12■■□□□ 1.13
CTSD-212ENST00000637815 ANKRD1Q15327 319 aa22.12■■□□□ 1.13
CTSD-212ENST00000637815 MCMDC2Q4G0Z9 681 aa22.12■■□□□ 1.13
CTSD-212ENST00000637815 TMEM87AQ8NBN3 555 aa22.12■■□□□ 1.13
CTSD-212ENST00000637815 FBXO3Q9UK99 471 aa22.12■■□□□ 1.13
CTSD-212ENST00000637815 NUP98P52948 1817 aa22.11■■□□□ 1.13
CTSD-212ENST00000637815 DDX46Q7L014 1031 aaKnown RBP22.11■■□□□ 1.13
CTSD-212ENST00000637815 ZNF594Q96JF6 807 aaPredicted RBP22.11■■□□□ 1.13
CTSD-212ENST00000637815 RBM27Q9P2N5 1060 aaKnown RBP22.11■■□□□ 1.13
CTSD-212ENST00000637815 TPCN1Q9ULQ1 816 aa22.11■■□□□ 1.13
CTSD-212ENST00000637815 TAF6LQ9Y6J9 622 aa22.11■■□□□ 1.13
CTSD-212ENST00000637815 COL9A3Q14050 684 aaPredicted RBP22.11■■□□□ 1.13
CTSD-212ENST00000637815 KRT32Q14532 448 aa22.11■■□□□ 1.13
CTSD-212ENST00000637815 NEUROD6Q96NK8 337 aa22.11■■□□□ 1.13
CTSD-212ENST00000637815 MAP3K15Q6ZN16 1313 aa22.1■■□□□ 1.13
CTSD-212ENST00000637815 GJB2P29033 226 aa22.1■■□□□ 1.13
CTSD-212ENST00000637815 TIMM10P62072 90 aa22.1■■□□□ 1.13
CTSD-212ENST00000637815 PAG1Q9NWQ8 432 aa22.1■■□□□ 1.13
CTSD-212ENST00000637815 U3KPZ7 1027 aaPredicted RBP22.1■■□□□ 1.13
CTSD-212ENST00000637815 NASPP49321 788 aaPredicted RBP22.09■■□□□ 1.13
CTSD-212ENST00000637815 F13A1P00488 732 aa22.09■■□□□ 1.13
CTSD-212ENST00000637815 ZBTB38Q8NAP3 1195 aaPredicted RBP22.09■■□□□ 1.13
CTSD-212ENST00000637815 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.09■■□□□ 1.13
CTSD-212ENST00000637815 DOT1LQ8TEK3 1739 aa22.09■■□□□ 1.13
CTSD-212ENST00000637815 A0A1B0GUL7 405 aa22.08■■□□□ 1.13
CTSD-212ENST00000637815 CCDC57Q2TAC2 916 aa22.08■■□□□ 1.13
CTSD-212ENST00000637815 GIGYF2Q6Y7W6 1299 aaKnown RBP22.08■■□□□ 1.13
CTSD-212ENST00000637815 SEC62Q99442 399 aaKnown RBP22.08■■□□□ 1.13
CTSD-212ENST00000637815 PUS3Q9BZE2 481 aaKnown RBP22.08■■□□□ 1.13
CTSD-212ENST00000637815 ZNF330Q9Y3S2 320 aaPredicted RBP22.08■■□□□ 1.13
CTSD-212ENST00000637815 CHGBP05060 677 aa22.07■■□□□ 1.12
CTSD-212ENST00000637815 CSF1RP07333 972 aa22.07■■□□□ 1.12
CTSD-212ENST00000637815 TOB2Q14106 344 aaPredicted RBP22.07■■□□□ 1.12
CTSD-212ENST00000637815 CCDC129Q6ZRS4 1044 aa22.07■■□□□ 1.12
CTSD-212ENST00000637815 USP48Q86UV5 1035 aa22.07■■□□□ 1.12
CTSD-212ENST00000637815 HELLSQ9NRZ9 838 aa22.07■■□□□ 1.12
CTSD-212ENST00000637815 ATP6V1DQ9Y5K8 247 aa22.07■■□□□ 1.12
CTSD-212ENST00000637815 MYH7P12883 1935 aa22.07■■□□□ 1.12
CTSD-212ENST00000637815 GOLIM4O00461 696 aa22.07■■□□□ 1.12
CTSD-212ENST00000637815 PDIA4P13667 645 aaKnown RBP22.07■■□□□ 1.12
CTSD-212ENST00000637815 LRSAM1Q6UWE0 723 aa22.07■■□□□ 1.12
CTSD-212ENST00000637815 MTMR6Q9Y217 621 aa22.07■■□□□ 1.12
CTSD-212ENST00000637815 CDHR2Q9BYE9 1310 aa22.07■■□□□ 1.12
CTSD-212ENST00000637815 CYP19A1P11511 503 aaPredicted RBP22.06■■□□□ 1.12
CTSD-212ENST00000637815 PRIM1P49642 420 aaKnown RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms