RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 RIMS1Q86UR5 1692 aaKnown RBP9.97□□□□□ -0.81
CHD2-226ENST00000636881 GNAT3A8MTJ3 354 aa9.97□□□□□ -0.81
CHD2-226ENST00000636881 JAK2O60674 1132 aa9.97□□□□□ -0.81
CHD2-226ENST00000636881 H2AFXP16104 143 aaPredicted RBP9.97□□□□□ -0.81
CHD2-226ENST00000636881 RESTQ13127 1097 aa9.97□□□□□ -0.81
CHD2-226ENST00000636881 PLCD3Q8N3E9 789 aa9.97□□□□□ -0.81
CHD2-226ENST00000636881 MAP4K1Q92918 833 aa9.97□□□□□ -0.81
CHD2-226ENST00000636881 SYTL4Q96C24 671 aaPredicted RBP9.97□□□□□ -0.81
CHD2-226ENST00000636881 TRIM34Q9BYJ4 488 aa9.97□□□□□ -0.81
CHD2-226ENST00000636881 ERBB3P21860 1342 aa9.97□□□□□ -0.81
CHD2-226ENST00000636881 A0A087WWV3 80 aa9.97□□□□□ -0.81
CHD2-226ENST00000636881 NUTM2FA1L443 756 aa9.97□□□□□ -0.81
CHD2-226ENST00000636881 SMC2O95347 1197 aa9.97□□□□□ -0.81
CHD2-226ENST00000636881 AACSQ86V21 672 aa9.97□□□□□ -0.81
CHD2-226ENST00000636881 MNS1Q8NEH6 495 aa9.97□□□□□ -0.81
CHD2-226ENST00000636881 UBXN4Q92575 508 aa9.97□□□□□ -0.81
CHD2-226ENST00000636881 ZSCAN16Q9H4T2 348 aaPredicted RBP9.97□□□□□ -0.81
CHD2-226ENST00000636881 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.97□□□□□ -0.816e-8■■■■□ 22.3
CHD2-226ENST00000636881 DIP2CQ9Y2E4 1556 aa9.97□□□□□ -0.81
CHD2-226ENST00000636881 PNMA6AP0CW24 399 aaPredicted RBP9.96□□□□□ -0.81
CHD2-226ENST00000636881 AMPHP49418 695 aa9.96□□□□□ -0.81
CHD2-226ENST00000636881 TAF7Q15545 349 aaPredicted RBP9.96□□□□□ -0.81
CHD2-226ENST00000636881 TMC6Q7Z403 805 aa9.96□□□□□ -0.81
CHD2-226ENST00000636881 FSD1Q9BTV5 496 aa9.96□□□□□ -0.81
CHD2-226ENST00000636881 GIGYF1O75420 1035 aaPredicted RBP9.96□□□□□ -0.81
CHD2-226ENST00000636881 CAPN2P17655 700 aa9.96□□□□□ -0.81
CHD2-226ENST00000636881 AKAP12Q02952 1782 aa9.96□□□□□ -0.81
CHD2-226ENST00000636881 SLC20A2Q08357 652 aa9.96□□□□□ -0.81
CHD2-226ENST00000636881 TOB2Q14106 344 aaPredicted RBP9.96□□□□□ -0.81
CHD2-226ENST00000636881 CCDC150Q8NCX0 1101 aa9.96□□□□□ -0.81
CHD2-226ENST00000636881 PPP1R13BQ96KQ4 1090 aa9.96□□□□□ -0.81
CHD2-226ENST00000636881 TULP2O00295 520 aa9.96□□□□□ -0.82
CHD2-226ENST00000636881 SFPQP23246 707 aaKnown RBP eCLIP9.96□□□□□ -0.82
CHD2-226ENST00000636881 ERC1Q8IUD2 1116 aa9.96□□□□□ -0.82
CHD2-226ENST00000636881 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.96□□□□□ -0.82
CHD2-226ENST00000636881 FHOD1Q9Y613 1164 aa9.96□□□□□ -0.82
CHD2-226ENST00000636881 COL9A3Q14050 684 aaPredicted RBP9.95□□□□□ -0.82
CHD2-226ENST00000636881 DHX40Q8IX18 779 aaKnown RBP9.95□□□□□ -0.82
CHD2-226ENST00000636881 DNAAF4Q8WXU2 420 aa9.95□□□□□ -0.82
CHD2-226ENST00000636881 L2HGDHQ9H9P8 463 aa9.95□□□□□ -0.82
CHD2-226ENST00000636881 IMPACTQ9P2X3 320 aa9.95□□□□□ -0.82
CHD2-226ENST00000636881 RIMBP3CA6NJZ7 1639 aa9.95□□□□□ -0.82
CHD2-226ENST00000636881 RIMBP3BA6NNM3 1639 aa9.95□□□□□ -0.82
CHD2-226ENST00000636881 RIMBP3Q9UFD9 1639 aa9.95□□□□□ -0.82
CHD2-226ENST00000636881 TXLNBQ8N3L3 684 aa9.95□□□□□ -0.82
CHD2-226ENST00000636881 ACEP12821 1306 aa9.95□□□□□ -0.82
CHD2-226ENST00000636881 PRR36Q9H6K5 1346 aa9.95□□□□□ -0.82
CHD2-226ENST00000636881 TNNT3P45378 269 aaPredicted RBP9.95□□□□□ -0.82
CHD2-226ENST00000636881 PLA2G4AP47712 749 aa9.95□□□□□ -0.82
CHD2-226ENST00000636881 GPS2Q13227 327 aa9.95□□□□□ -0.82
CHD2-226ENST00000636881 E4F1Q66K89 784 aaPredicted RBP9.95□□□□□ -0.82
CHD2-226ENST00000636881 FSIP1Q8NA03 581 aa9.95□□□□□ -0.82
CHD2-226ENST00000636881 LRRN4CLQ8ND94 238 aa9.95□□□□□ -0.82
CHD2-226ENST00000636881 NEK11Q8NG66 645 aa9.95□□□□□ -0.82
CHD2-226ENST00000636881 EYA1Q99502 592 aa9.95□□□□□ -0.82
CHD2-226ENST00000636881 KCND1Q9NSA2 647 aa9.95□□□□□ -0.82
CHD2-226ENST00000636881 PA2G4Q9UQ80 394 aaKnown RBP9.95□□□□□ -0.82
CHD2-226ENST00000636881 PI4KAP2A4QPH2 592 aa9.94□□□□□ -0.82
CHD2-226ENST00000636881 PSDA5PKW4 1024 aaPredicted RBP9.94□□□□□ -0.82
CHD2-226ENST00000636881 PI4KAP1Q8N8J0 262 aa9.94□□□□□ -0.82
CHD2-226ENST00000636881 SDF4Q9BRK5 362 aa9.94□□□□□ -0.82
CHD2-226ENST00000636881 OSBPL5Q9H0X9 879 aaPredicted RBP9.94□□□□□ -0.82
CHD2-226ENST00000636881 C9orf78Q9NZ63 289 aaPredicted RBP9.94□□□□□ -0.82
CHD2-226ENST00000636881 HMG20BQ9P0W2 317 aa9.94□□□□□ -0.82
CHD2-226ENST00000636881 DNAI1Q9UI46 699 aa9.94□□□□□ -0.82
CHD2-226ENST00000636881 PEAK1Q9H792 1746 aa9.94□□□□□ -0.82
CHD2-226ENST00000636881 SPATA31D1Q6ZQQ2 1576 aa9.94□□□□□ -0.82
CHD2-226ENST00000636881 N4BP2Q86UW6 1770 aaPredicted RBP9.94□□□□□ -0.82
CHD2-226ENST00000636881 SETD1AO15047 1707 aaKnown RBP9.94□□□□□ -0.82
CHD2-226ENST00000636881 RGPD1P0DJD0 1748 aa9.94□□□□□ -0.82
CHD2-226ENST00000636881 CRYBG1Q9Y4K1 1723 aa9.94□□□□□ -0.82
CHD2-226ENST00000636881 A0A0D9SFI3 127 aa9.94□□□□□ -0.82
CHD2-226ENST00000636881 TUBB4AP04350 444 aa9.94□□□□□ -0.82
CHD2-226ENST00000636881 ME1P48163 572 aa9.94□□□□□ -0.82
CHD2-226ENST00000636881 ERCC4Q92889 916 aaPredicted RBP9.94□□□□□ -0.82
CHD2-226ENST00000636881 ZNF396Q96N95 335 aaPredicted RBP9.94□□□□□ -0.82
CHD2-226ENST00000636881 GOLPH3LQ9H4A5 285 aa9.94□□□□□ -0.82
CHD2-226ENST00000636881 CCP110O43303 1012 aa9.94□□□□□ -0.82
CHD2-226ENST00000636881 CCDC8Q9H0W5 538 aaPredicted RBP9.94□□□□□ -0.82
CHD2-226ENST00000636881 ALDH8A1Q9H2A2 487 aaPredicted RBP9.94□□□□□ -0.82
CHD2-226ENST00000636881 BOLA2Q9H3K6 86 aa9.94□□□□□ -0.82
CHD2-226ENST00000636881 IFNKQ9P0W0 207 aa9.94□□□□□ -0.82
CHD2-226ENST00000636881 OVOS2A0A0J9YW53 1432 aa9.94□□□□□ -0.82
CHD2-226ENST00000636881 OVOS2Q6IE36 1432 aa9.94□□□□□ -0.82
CHD2-226ENST00000636881 URI1O94763 535 aaPredicted RBP9.93□□□□□ -0.82
CHD2-226ENST00000636881 FAM160A1Q05DH4 1040 aa9.93□□□□□ -0.82
CHD2-226ENST00000636881 RAD51AP2Q09MP3 1159 aa9.93□□□□□ -0.82
CHD2-226ENST00000636881 KRT32Q14532 448 aa9.93□□□□□ -0.82
CHD2-226ENST00000636881 DHX8Q14562 1220 aaKnown RBP9.93□□□□□ -0.82
CHD2-226ENST00000636881 TAF6LQ9Y6J9 622 aa9.93□□□□□ -0.82
CHD2-226ENST00000636881 BEND3Q5T5X7 828 aa9.93□□□□□ -0.82
CHD2-226ENST00000636881 Q6ZUG5 572 aa9.93□□□□□ -0.82
CHD2-226ENST00000636881 FMNL2Q96PY5 1086 aa9.93□□□□□ -0.82
CHD2-226ENST00000636881 FTOQ9C0B1 505 aaKnown RBP eCLIP9.93□□□□□ -0.82
CHD2-226ENST00000636881 XPO4Q9C0E2 1151 aaKnown RBP9.93□□□□□ -0.82
CHD2-226ENST00000636881 ORC3Q9UBD5 711 aaPredicted RBP9.93□□□□□ -0.82
CHD2-226ENST00000636881 FEZ2Q9UHY8 353 aaPredicted RBP9.93□□□□□ -0.82
CHD2-226ENST00000636881 G3BP1Q13283 466 aaKnown RBP eCLIP9.93□□□□□ -0.82
CHD2-226ENST00000636881 KRBA2Q6ZNG9 492 aa9.93□□□□□ -0.82
CHD2-226ENST00000636881 NEK1Q96PY6 1258 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms