RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 NUDT16Q96DE0 195 aaKnown RBP11.65□□□□□ -0.54
LINC01108-202ENST00000635227 PDS5BQ9NTI5 1447 aa11.64□□□□□ -0.55
LINC01108-202ENST00000635227 NEURL1BA8MQ27 555 aa11.64□□□□□ -0.55
LINC01108-202ENST00000635227 FZD6O60353 706 aa11.64□□□□□ -0.55
LINC01108-202ENST00000635227 SASH3O75995 380 aa11.64□□□□□ -0.55
LINC01108-202ENST00000635227 C1orf229Q6ZS94 237 aaPredicted RBP11.64□□□□□ -0.55
LINC01108-202ENST00000635227 CCDC87Q9NVE4 849 aa11.64□□□□□ -0.55
LINC01108-202ENST00000635227 MRC2Q9UBG0 1479 aa11.63□□□□□ -0.55
LINC01108-202ENST00000635227 EGFRP00533 1210 aa11.63□□□□□ -0.55
LINC01108-202ENST00000635227 PDGFAP04085 211 aa11.63□□□□□ -0.55
LINC01108-202ENST00000635227 NFKB1P19838 968 aa11.63□□□□□ -0.55
LINC01108-202ENST00000635227 TARSP26639 723 aaKnown RBP11.63□□□□□ -0.55
LINC01108-202ENST00000635227 ZNF385CQ66K41 422 aaPredicted RBP11.63□□□□□ -0.55
LINC01108-202ENST00000635227 FCHSD1Q86WN1 690 aa11.63□□□□□ -0.55
LINC01108-202ENST00000635227 PNMA5Q96PV4 448 aa11.63□□□□□ -0.55
LINC01108-202ENST00000635227 C11orf16Q9NQ32 467 aa11.63□□□□□ -0.55
LINC01108-202ENST00000635227 AVENQ9NQS1 362 aaPredicted RBP11.63□□□□□ -0.55
LINC01108-202ENST00000635227 ZFATQ9P243 1243 aa11.63□□□□□ -0.55
LINC01108-202ENST00000635227 POLIQ9UNA4 740 aa11.63□□□□□ -0.55
LINC01108-202ENST00000635227 PATL2C9JE40 543 aaKnown RBP11.62□□□□□ -0.55
LINC01108-202ENST00000635227 UBAP1LF5GYI3 381 aa11.62□□□□□ -0.55
LINC01108-202ENST00000635227 CELA2BP08218 269 aaPredicted RBP11.62□□□□□ -0.55
LINC01108-202ENST00000635227 ADH6P28332 368 aa11.62□□□□□ -0.55
LINC01108-202ENST00000635227 MZF1P28698 734 aaPredicted RBP11.62□□□□□ -0.55
LINC01108-202ENST00000635227 GOLGA6L1Q8N7Z2 621 aa11.62□□□□□ -0.55
LINC01108-202ENST00000635227 ZSCAN1Q8NBB4 408 aa11.62□□□□□ -0.55
LINC01108-202ENST00000635227 GDF2Q9UK05 429 aaPredicted RBP11.62□□□□□ -0.55
LINC01108-202ENST00000635227 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.62□□□□□ -0.55
LINC01108-202ENST00000635227 SMARCA4P51532 1647 aa11.61□□□□□ -0.55
LINC01108-202ENST00000635227 NEUROD1Q13562 356 aa11.61□□□□□ -0.55
LINC01108-202ENST00000635227 A6NHS1 94 aa11.6□□□□□ -0.55
LINC01108-202ENST00000635227 SIN3BO75182 1162 aa11.6□□□□□ -0.55
LINC01108-202ENST00000635227 BCRP11274 1271 aa11.6□□□□□ -0.55
LINC01108-202ENST00000635227 INSM1Q01101 510 aaPredicted RBP11.6□□□□□ -0.55
LINC01108-202ENST00000635227 SLCO4C1Q6ZQN7 724 aa11.6□□□□□ -0.55
LINC01108-202ENST00000635227 SVOPQ8N4V2 548 aa11.6□□□□□ -0.55
LINC01108-202ENST00000635227 GGNBP2Q9H3C7 697 aa11.6□□□□□ -0.55
LINC01108-202ENST00000635227 BIN2Q9UBW5 565 aaPredicted RBP11.6□□□□□ -0.55
LINC01108-202ENST00000635227 RSF1Q96T23 1441 aaPredicted RBP11.6□□□□□ -0.55
LINC01108-202ENST00000635227 EFCC1Q9HA90 598 aa11.59□□□□□ -0.55
LINC01108-202ENST00000635227 OIP5O43482 229 aa11.58□□□□□ -0.56
LINC01108-202ENST00000635227 RARAP10276 462 aa11.58□□□□□ -0.56
LINC01108-202ENST00000635227 GALNT6Q8NCL4 622 aa11.58□□□□□ -0.56
LINC01108-202ENST00000635227 FNDC3AQ9Y2H6 1198 aaKnown RBP11.58□□□□□ -0.56
LINC01108-202ENST00000635227 EPXP11678 715 aa11.57□□□□□ -0.56
LINC01108-202ENST00000635227 C8orf34Q49A92 452 aa11.57□□□□□ -0.56
LINC01108-202ENST00000635227 NLRP13Q86W25 1043 aa11.57□□□□□ -0.56
LINC01108-202ENST00000635227 EDARADDQ8WWZ3 215 aa11.57□□□□□ -0.56
LINC01108-202ENST00000635227 TNFRSF25Q93038 417 aa11.57□□□□□ -0.56
LINC01108-202ENST00000635227 MDFIQ99750 246 aa11.57□□□□□ -0.56
LINC01108-202ENST00000635227 IGFLR1Q9H665 355 aa11.57□□□□□ -0.56
LINC01108-202ENST00000635227 SHISA8B8ZZ34 492 aa11.56□□□□□ -0.56
LINC01108-202ENST00000635227 PCSK2P16519 638 aa11.56□□□□□ -0.56
LINC01108-202ENST00000635227 BRPF3Q9ULD4 1205 aa11.56□□□□□ -0.56
LINC01108-202ENST00000635227 HECW2Q9P2P5 1572 aa11.55□□□□□ -0.56
LINC01108-202ENST00000635227 MMP20O60882 483 aa11.55□□□□□ -0.56
LINC01108-202ENST00000635227 ARHGEF15O94989 841 aa11.55□□□□□ -0.56
LINC01108-202ENST00000635227 MAP3K6O95382 1288 aa11.55□□□□□ -0.56
LINC01108-202ENST00000635227 MAP3K10Q02779 954 aa11.55□□□□□ -0.56
LINC01108-202ENST00000635227 TBC1D8BQ0IIM8 1120 aa11.55□□□□□ -0.56
LINC01108-202ENST00000635227 ATAD2BQ9ULI0 1458 aa11.55□□□□□ -0.56
LINC01108-202ENST00000635227 ELOA3CA0A087WX78 387 aaPredicted RBP11.54□□□□□ -0.56
LINC01108-202ENST00000635227 ELOA3DA6NLF2 546 aaPredicted RBP11.54□□□□□ -0.56
LINC01108-202ENST00000635227 RPLP1P05386 114 aaKnown RBP11.54□□□□□ -0.56
LINC01108-202ENST00000635227 ELOA3BQ3SY89 546 aa11.54□□□□□ -0.56
LINC01108-202ENST00000635227 DHX32Q7L7V1 743 aaKnown RBP11.54□□□□□ -0.56
LINC01108-202ENST00000635227 ZNF438Q7Z4V0 828 aa11.54□□□□□ -0.56
LINC01108-202ENST00000635227 GJD3Q8N144 294 aa11.54□□□□□ -0.56
LINC01108-202ENST00000635227 ELOA3Q8NG57 546 aa11.54□□□□□ -0.56
LINC01108-202ENST00000635227 UBE2OQ9C0C9 1292 aaKnown RBP11.54□□□□□ -0.56
LINC01108-202ENST00000635227 ELP3Q9H9T3 547 aa11.54□□□□□ -0.56
LINC01108-202ENST00000635227 LRRC4BQ9NT99 713 aa11.54□□□□□ -0.56
LINC01108-202ENST00000635227 TMEM63CQ9P1W3 806 aa11.54□□□□□ -0.56
LINC01108-202ENST00000635227 ADARB2-AS1A8MUL3 147 aa11.53□□□□□ -0.56
LINC01108-202ENST00000635227 NDUFB5O43674 189 aa11.53□□□□□ -0.56
LINC01108-202ENST00000635227 ADH7P40394 386 aa11.53□□□□□ -0.56
LINC01108-202ENST00000635227 USP5P45974 858 aa11.53□□□□□ -0.56
LINC01108-202ENST00000635227 PDE12Q6L8Q7 609 aaKnown RBP11.53□□□□□ -0.56
LINC01108-202ENST00000635227 DNAJB12Q9NXW2 375 aaKnown RBP11.53□□□□□ -0.56
LINC01108-202ENST00000635227 HMGXB3Q12766 1538 aa11.53□□□□□ -0.56
LINC01108-202ENST00000635227 ZBTB42B2RXF5 422 aa11.52□□□□□ -0.57
LINC01108-202ENST00000635227 TTC16Q8NEE8 873 aa11.52□□□□□ -0.57
LINC01108-202ENST00000635227 TLR7Q9NYK1 1049 aaKnown RBP11.52□□□□□ -0.57
LINC01108-202ENST00000635227 DISP3Q9P2K9 1392 aa11.52□□□□□ -0.57
LINC01108-202ENST00000635227 PEG3Q9GZU2 1588 aa11.51□□□□□ -0.57
LINC01108-202ENST00000635227 XKR5Q6UX68 686 aa11.51□□□□□ -0.57
LINC01108-202ENST00000635227 ABI2Q9NYB9 513 aaPredicted RBP11.51□□□□□ -0.57
LINC01108-202ENST00000635227 MLLT1Q03111 559 aaPredicted RBP11.5□□□□□ -0.57
LINC01108-202ENST00000635227 BTBD6Q96KE9 485 aa11.5□□□□□ -0.57
LINC01108-202ENST00000635227 SLC6A14Q9UN76 642 aa11.5□□□□□ -0.57
LINC01108-202ENST00000635227 MROH2BQ7Z745 1585 aa11.5□□□□□ -0.57
LINC01108-202ENST00000635227 PSAPP07602 524 aa11.49□□□□□ -0.57
LINC01108-202ENST00000635227 TTC39BQ5VTQ0 682 aaPredicted RBP11.49□□□□□ -0.57
LINC01108-202ENST00000635227 SND1Q7KZF4 910 aaKnown RBP eCLIP11.49□□□□□ -0.57
LINC01108-202ENST00000635227 NEDD1Q8NHV4 660 aa11.49□□□□□ -0.57
LINC01108-202ENST00000635227 TRPM4Q8TD43 1214 aa11.49□□□□□ -0.57
LINC01108-202ENST00000635227 GZF1Q9H116 711 aaPredicted RBP11.49□□□□□ -0.57
LINC01108-202ENST00000635227 ENAMQ9NRM1 1142 aa11.49□□□□□ -0.57
LINC01108-202ENST00000635227 CNTN3Q9P232 1028 aa11.49□□□□□ -0.57
LINC01108-202ENST00000635227 DCTN4Q9UJW0 460 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms