RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 USP5P45974 858 aa6.4□□□□□ -1.38
SRP54-214ENST00000630962 GPLD1P80108 840 aa6.4□□□□□ -1.38
SRP54-214ENST00000630962 NOM1Q5C9Z4 860 aaKnown RBP6.4□□□□□ -1.38
SRP54-214ENST00000630962 DHX32Q7L7V1 743 aaKnown RBP6.4□□□□□ -1.38
SRP54-214ENST00000630962 RAB44Q7Z6P3 723 aaPredicted RBP6.4□□□□□ -1.38
SRP54-214ENST00000630962 TRPM4Q8TD43 1214 aa6.4□□□□□ -1.38
SRP54-214ENST00000630962 DNAJB12Q9NXW2 375 aaKnown RBP6.4□□□□□ -1.38
SRP54-214ENST00000630962 TLR7Q9NYK1 1049 aaKnown RBP6.4□□□□□ -1.38
SRP54-214ENST00000630962 SLAIN2Q9P270 581 aa6.4□□□□□ -1.38
SRP54-214ENST00000630962 EGFL7Q9UHF1 273 aa6.4□□□□□ -1.38
SRP54-214ENST00000630962 SLC6A14Q9UN76 642 aa6.4□□□□□ -1.38
SRP54-214ENST00000630962 UBAP1LF5GYI3 381 aa6.39□□□□□ -1.39
SRP54-214ENST00000630962 M0R082 166 aa6.39□□□□□ -1.39
SRP54-214ENST00000630962 HOXD8P13378 290 aaPredicted RBP6.39□□□□□ -1.39
SRP54-214ENST00000630962 SNRPNP63162 240 aaKnown RBP6.39□□□□□ -1.39
SRP54-214ENST00000630962 FKBP4Q02790 459 aaKnown RBP eCLIP6.39□□□□□ -1.39
SRP54-214ENST00000630962 PLAURQ03405 335 aa6.39□□□□□ -1.39
SRP54-214ENST00000630962 TBC1D8BQ0IIM8 1120 aa6.39□□□□□ -1.39
SRP54-214ENST00000630962 PRRT3Q5FWE3 981 aa6.39□□□□□ -1.39
SRP54-214ENST00000630962 PDE12Q6L8Q7 609 aaKnown RBP6.39□□□□□ -1.39
SRP54-214ENST00000630962 CACTIN-AS1Q8N1I8 211 aa6.39□□□□□ -1.39
SRP54-214ENST00000630962 ZNF417Q8TAU3 575 aa6.39□□□□□ -1.39
SRP54-214ENST00000630962 GTF3C2Q8WUA4 911 aaPredicted RBP6.39□□□□□ -1.39
SRP54-214ENST00000630962 TTC9Q92623 222 aa6.39□□□□□ -1.39
SRP54-214ENST00000630962 ZNF587Q96SQ5 575 aaPredicted RBP6.39□□□□□ -1.39
SRP54-214ENST00000630962 IGFLR1Q9H665 355 aa6.39□□□□□ -1.39
SRP54-214ENST00000630962 KCNMB2Q9Y691 235 aa6.39□□□□□ -1.39
SRP54-214ENST00000630962 SASH3O75995 380 aa6.38□□□□□ -1.39
SRP54-214ENST00000630962 NPR3P17342 541 aa6.38□□□□□ -1.39
SRP54-214ENST00000630962 HOXB4P17483 251 aaPredicted RBP6.38□□□□□ -1.39
SRP54-214ENST00000630962 EHHADHQ08426 723 aa6.38□□□□□ -1.39
SRP54-214ENST00000630962 GRIN2CQ14957 1233 aa6.38□□□□□ -1.39
SRP54-214ENST00000630962 MICALL1Q8N3F8 863 aa6.38□□□□□ -1.39
SRP54-214ENST00000630962 DCAF11Q8TEB1 546 aa6.38□□□□□ -1.39
SRP54-214ENST00000630962 SEPT3Q9UH03 358 aa6.38□□□□□ -1.39
SRP54-214ENST00000630962 RGS9O75916 674 aaPredicted RBP6.37□□□□□ -1.39
SRP54-214ENST00000630962 SPATA31C1P0DKV0 1188 aa6.37□□□□□ -1.39
SRP54-214ENST00000630962 TARSP26639 723 aaKnown RBP6.37□□□□□ -1.39
SRP54-214ENST00000630962 MZF1P28698 734 aaPredicted RBP6.37□□□□□ -1.39
SRP54-214ENST00000630962 GSK3AP49840 483 aa6.37□□□□□ -1.39
SRP54-214ENST00000630962 TTC39BQ5VTQ0 682 aaPredicted RBP6.37□□□□□ -1.39
SRP54-214ENST00000630962 CAPN12Q6ZSI9 719 aa6.37□□□□□ -1.39
SRP54-214ENST00000630962 KRT25Q7Z3Z0 450 aa6.37□□□□□ -1.39
SRP54-214ENST00000630962 FAM35AQ86V20 835 aa6.37□□□□□ -1.39
SRP54-214ENST00000630962 CCER1Q8TC90 406 aaPredicted RBP6.37□□□□□ -1.39
SRP54-214ENST00000630962 PMEPA1Q969W9 287 aa6.37□□□□□ -1.39
SRP54-214ENST00000630962 DCAF5Q96JK2 942 aa6.37□□□□□ -1.39
SRP54-214ENST00000630962 GHRHP01286 108 aa6.36□□□□□ -1.39
SRP54-214ENST00000630962 GRNP28799 593 aaKnown RBP6.36□□□□□ -1.39
SRP54-214ENST00000630962 TRIM28Q13263 835 aaKnown RBP6.36□□□□□ -1.39
SRP54-214ENST00000630962 AAMPQ13685 434 aa6.36□□□□□ -1.39
SRP54-214ENST00000630962 ELMSAN1Q6PJG2 1045 aa6.36□□□□□ -1.39
SRP54-214ENST00000630962 XKR5Q6UX68 686 aa6.36□□□□□ -1.39
SRP54-214ENST00000630962 C20orf204Q6ZNR8 217 aa6.36□□□□□ -1.39
SRP54-214ENST00000630962 GPR152Q8TDT2 470 aa6.36□□□□□ -1.39
SRP54-214ENST00000630962 SPACA7Q96KW9 195 aa6.36□□□□□ -1.39
SRP54-214ENST00000630962 NACC1Q96RE7 527 aa6.36□□□□□ -1.39
SRP54-214ENST00000630962 JPH1Q9HDC5 661 aaPredicted RBP6.36□□□□□ -1.39
SRP54-214ENST00000630962 ALBP02768 609 aa6.35□□□□□ -1.39
SRP54-214ENST00000630962 EIF1AXP47813 144 aaKnown RBP6.35□□□□□ -1.39
SRP54-214ENST00000630962 RAC1P63000 192 aa6.35□□□□□ -1.39
SRP54-214ENST00000630962 PSAPL1Q6NUJ1 521 aa6.35□□□□□ -1.39
SRP54-214ENST00000630962 RETREG2Q8NC44 543 aa6.35□□□□□ -1.39
SRP54-214ENST00000630962 PLVAPQ9BX97 442 aa6.35□□□□□ -1.39
SRP54-214ENST00000630962 ABI2Q9NYB9 513 aaPredicted RBP6.35□□□□□ -1.39
SRP54-214ENST00000630962 ZFATQ9P243 1243 aa6.35□□□□□ -1.39
SRP54-214ENST00000630962 STARD13Q9Y3M8 1113 aa6.35□□□□□ -1.39
SRP54-214ENST00000630962 LOC102724428A0A0B4J2F2 783 aa6.34□□□□□ -1.39
SRP54-214ENST00000630962 PATL2C9JE40 543 aaKnown RBP6.34□□□□□ -1.39
SRP54-214ENST00000630962 MMP20O60882 483 aa6.34□□□□□ -1.39
SRP54-214ENST00000630962 SIK1P57059 783 aa6.34□□□□□ -1.39
SRP54-214ENST00000630962 HYAL2Q12891 473 aa6.34□□□□□ -1.39
SRP54-214ENST00000630962 PHLDB3Q6NSJ2 640 aa6.34□□□□□ -1.39
SRP54-214ENST00000630962 ZNF438Q7Z4V0 828 aa6.34□□□□□ -1.39
SRP54-214ENST00000630962 DTWD1Q8N5C7 304 aa6.34□□□□□ -1.39
SRP54-214ENST00000630962 OR13H1Q8NG92 308 aa6.34□□□□□ -1.39
SRP54-214ENST00000630962 NUDT16Q96DE0 195 aaKnown RBP6.34□□□□□ -1.39
SRP54-214ENST00000630962 MUC3BQ9H195 1237 aa6.34□□□□□ -1.39
SRP54-214ENST00000630962 BRD1O95696 1058 aa6.33□□□□□ -1.4
SRP54-214ENST00000630962 APBA3O96018 575 aa6.33□□□□□ -1.4
SRP54-214ENST00000630962 ABL1P00519 1130 aa6.33□□□□□ -1.4
SRP54-214ENST00000630962 NEFLP07196 543 aa6.33□□□□□ -1.4
SRP54-214ENST00000630962 CPB1P15086 417 aa6.33□□□□□ -1.4
SRP54-214ENST00000630962 MPSTP25325 297 aa6.33□□□□□ -1.4
SRP54-214ENST00000630962 DNM1Q05193 864 aaKnown RBP6.33□□□□□ -1.4
SRP54-214ENST00000630962 EDEM1Q92611 657 aa6.33□□□□□ -1.4
SRP54-214ENST00000630962 SRA1Q9HD15 236 aaKnown RBP6.33□□□□□ -1.4
SRP54-214ENST00000630962 USP20Q9Y2K6 914 aa6.33□□□□□ -1.4
SRP54-214ENST00000630962 FAM177BA6PVY3 158 aa6.32□□□□□ -1.4
SRP54-214ENST00000630962 ZBTB39O15060 712 aa6.32□□□□□ -1.4
SRP54-214ENST00000630962 ICMTO60725 284 aa6.32□□□□□ -1.4
SRP54-214ENST00000630962 NID1P14543 1247 aa6.32□□□□□ -1.4
SRP54-214ENST00000630962 EIF2AK2P19525 551 aaKnown RBP6.32□□□□□ -1.4
SRP54-214ENST00000630962 SCNN1AP37088 669 aa6.32□□□□□ -1.4
SRP54-214ENST00000630962 TRIP4Q15650 581 aaPredicted RBP6.32□□□□□ -1.4
SRP54-214ENST00000630962 TRAPPC3LQ5T215 181 aa6.32□□□□□ -1.4
SRP54-214ENST00000630962 MAP4K3Q8IVH8 894 aa6.32□□□□□ -1.4
SRP54-214ENST00000630962 GLYCTKQ8IVS8 523 aa6.32□□□□□ -1.4
SRP54-214ENST00000630962 TRIM11Q96F44 468 aa6.32□□□□□ -1.4
SRP54-214ENST00000630962 CITED4Q96RK1 184 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms