RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 ZBTB1Q9Y2K1 713 aa10.21□□□□□ -0.77
TCF4-260ENST00000627685 USP42Q9H9J4 1324 aaKnown RBP10.21□□□□□ -0.78
TCF4-260ENST00000627685 UTRNP46939 3433 aa10.21□□□□□ -0.78
TCF4-260ENST00000627685 ZNF790Q6PG37 636 aa10.2□□□□□ -0.78
TCF4-260ENST00000627685 NECTIN2Q92692 538 aa10.2□□□□□ -0.78
TCF4-260ENST00000627685 THUMPD2Q9BTF0 503 aaKnown RBP10.2□□□□□ -0.78
TCF4-260ENST00000627685 SRP68Q9UHB9 627 aaKnown RBP10.2□□□□□ -0.78
TCF4-260ENST00000627685 COL15A1P39059 1388 aa10.19□□□□□ -0.78
TCF4-260ENST00000627685 DDR1Q08345 913 aa10.19□□□□□ -0.78
TCF4-260ENST00000627685 NLRP7Q8WX94 980 aa10.19□□□□□ -0.78
TCF4-260ENST00000627685 BRCA1P38398 1863 aaKnown RBP10.19□□□□□ -0.78
TCF4-260ENST00000627685 YBX3P16989 372 aaKnown RBP eCLIP10.18□□□□□ -0.78
TCF4-260ENST00000627685 APLP1P51693 650 aa10.18□□□□□ -0.78
TCF4-260ENST00000627685 MAP2K5Q13163 448 aa10.18□□□□□ -0.78
TCF4-260ENST00000627685 NFE2L2Q16236 605 aa10.18□□□□□ -0.78
TCF4-260ENST00000627685 CCDC87Q9NVE4 849 aa10.18□□□□□ -0.78
TCF4-260ENST00000627685 NUDCQ9Y266 331 aa10.18□□□□□ -0.78
TCF4-260ENST00000627685 KAT6BQ8WYB5 2073 aa10.18□□□□□ -0.78
TCF4-260ENST00000627685 CARMIL3Q8ND23 1372 aa10.17□□□□□ -0.78
TCF4-260ENST00000627685 HTATSF1O43719 755 aaKnown RBP10.17□□□□□ -0.78
TCF4-260ENST00000627685 ZEB1P37275 1124 aaPredicted RBP10.17□□□□□ -0.78
TCF4-260ENST00000627685 EIF5P55010 431 aaKnown RBP10.17□□□□□ -0.78
TCF4-260ENST00000627685 LRP10Q7Z4F1 713 aa10.17□□□□□ -0.78
TCF4-260ENST00000627685 RTCBQ9Y3I0 505 aaKnown RBP10.17□□□□□ -0.78
TCF4-260ENST00000627685 GOLGB1Q14789 3259 aaKnown RBP10.17□□□□□ -0.78
TCF4-260ENST00000627685 COL11A2P13942 1736 aaPredicted RBP10.16□□□□□ -0.78
TCF4-260ENST00000627685 IRF6O14896 467 aa10.16□□□□□ -0.78
TCF4-260ENST00000627685 NBPF10Q6P3W6 841 aaKnown RBP10.16□□□□□ -0.78
TCF4-260ENST00000627685 NBPF15Q8N660 670 aa10.16□□□□□ -0.78
TCF4-260ENST00000627685 PHOX2BQ99453 314 aa10.16□□□□□ -0.78
TCF4-260ENST00000627685 ITGBL1O95965 494 aaPredicted RBP10.15□□□□□ -0.78
TCF4-260ENST00000627685 MMP10P09238 476 aa10.15□□□□□ -0.78
TCF4-260ENST00000627685 TM4SF1P30408 202 aa10.15□□□□□ -0.78
TCF4-260ENST00000627685 TMPOP42166 694 aaKnown RBP10.15□□□□□ -0.78
TCF4-260ENST00000627685 KCNC4Q03721 635 aa10.15□□□□□ -0.78
TCF4-260ENST00000627685 TEFQ10587 303 aa10.15□□□□□ -0.78
TCF4-260ENST00000627685 KRI1Q8N9T8 703 aaKnown RBP10.15□□□□□ -0.78
TCF4-260ENST00000627685 ADAMTS8Q9UP79 889 aa10.15□□□□□ -0.78
TCF4-260ENST00000627685 CD2APQ9Y5K6 639 aa10.15□□□□□ -0.78
TCF4-260ENST00000627685 USP16Q9Y5T5 823 aa10.15□□□□□ -0.78
TCF4-260ENST00000627685 ANKRD31Q8N7Z5 1873 aa10.15□□□□□ -0.79
TCF4-260ENST00000627685 ADCY9O60503 1353 aa10.14□□□□□ -0.79
TCF4-260ENST00000627685 DLEC1Q9Y238 1755 aa10.14□□□□□ -0.79
TCF4-260ENST00000627685 BTBD11A6QL63 1104 aa10.14□□□□□ -0.79
TCF4-260ENST00000627685 POLRMTO00411 1230 aaKnown RBP10.14□□□□□ -0.79
TCF4-260ENST00000627685 KCNA3P22001 575 aa10.14□□□□□ -0.79
TCF4-260ENST00000627685 YY1P25490 414 aa10.14□□□□□ -0.79
TCF4-260ENST00000627685 ZC3H15Q8WU90 426 aaKnown RBP10.14□□□□□ -0.79
TCF4-260ENST00000627685 MIS18AQ9NYP9 233 aa10.14□□□□□ -0.79
TCF4-260ENST00000627685 AFDNP55196 1824 aaKnown RBP10.14□□□□□ -0.79
TCF4-260ENST00000627685 A1BGP04217 495 aa10.13□□□□□ -0.79
TCF4-260ENST00000627685 SLC10A3P09131 477 aa10.13□□□□□ -0.79
TCF4-260ENST00000627685 PIP4K2AP48426 406 aaPredicted RBP10.13□□□□□ -0.79
TCF4-260ENST00000627685 EIF4A1P60842 406 aaKnown RBP10.13□□□□□ -0.79
TCF4-260ENST00000627685 TRAPPC3LQ5T215 181 aa10.13□□□□□ -0.79
TCF4-260ENST00000627685 CCDC146Q8IYE0 955 aa10.13□□□□□ -0.79
TCF4-260ENST00000627685 FMNL2Q96PY5 1086 aa10.13□□□□□ -0.79
TCF4-260ENST00000627685 DAXXQ9UER7 740 aaPredicted RBP10.13□□□□□ -0.79
TCF4-260ENST00000627685 NARFQ9UHQ1 456 aa10.13□□□□□ -0.79
TCF4-260ENST00000627685 N4BP2Q86UW6 1770 aaPredicted RBP10.13□□□□□ -0.79
TCF4-260ENST00000627685 TNRC6CQ9HCJ0 1690 aaKnown RBP10.12□□□□□ -0.79
TCF4-260ENST00000627685 CAMTA2O94983 1202 aa10.12□□□□□ -0.79
TCF4-260ENST00000627685 NFIXQ14938 502 aa10.12□□□□□ -0.79
TCF4-260ENST00000627685 IFFO2Q5TF58 517 aa10.12□□□□□ -0.79
TCF4-260ENST00000627685 USPL1Q5W0Q7 1092 aa10.12□□□□□ -0.79
TCF4-260ENST00000627685 NLGN1Q8N2Q7 840 aa10.12□□□□□ -0.79
TCF4-260ENST00000627685 CCDC102AQ96A19 550 aa10.12□□□□□ -0.79
TCF4-260ENST00000627685 MTRQ99707 1265 aa10.12□□□□□ -0.79
TCF4-260ENST00000627685 PRR14Q9BWN1 585 aa10.12□□□□□ -0.79
TCF4-260ENST00000627685 RRP7AQ9Y3A4 280 aaKnown RBP10.12□□□□□ -0.79
TCF4-260ENST00000627685 DDX11L8A8MPP1 907 aa10.11□□□□□ -0.79
TCF4-260ENST00000627685 GIGYF1O75420 1035 aaPredicted RBP10.11□□□□□ -0.79
TCF4-260ENST00000627685 CFHP08603 1231 aa10.11□□□□□ -0.79
TCF4-260ENST00000627685 IL6STP40189 918 aaPredicted RBP10.11□□□□□ -0.79
TCF4-260ENST00000627685 TAF7Q15545 349 aaPredicted RBP10.11□□□□□ -0.79
TCF4-260ENST00000627685 KRT24Q2M2I5 525 aa10.11□□□□□ -0.79
TCF4-260ENST00000627685 KMT5BQ4FZB7 885 aa10.11□□□□□ -0.79
TCF4-260ENST00000627685 TJAP1Q5JTD0 557 aa10.11□□□□□ -0.79
TCF4-260ENST00000627685 GRIN3BO60391 1043 aa10.1□□□□□ -0.79
TCF4-260ENST00000627685 ZMYND10O75800 440 aa10.1□□□□□ -0.79
TCF4-260ENST00000627685 ZNF853P0CG23 659 aa10.1□□□□□ -0.79
TCF4-260ENST00000627685 CANXP27824 592 aaKnown RBP10.1□□□□□ -0.79
TCF4-260ENST00000627685 RFC4P35249 363 aa10.1□□□□□ -0.79
TCF4-260ENST00000627685 COPS2P61201 443 aa10.1□□□□□ -0.79
TCF4-260ENST00000627685 GPR162Q16538 588 aa10.1□□□□□ -0.79
TCF4-260ENST00000627685 TTC5Q8N0Z6 440 aa10.1□□□□□ -0.79
TCF4-260ENST00000627685 RDH13Q8NBN7 331 aa10.1□□□□□ -0.79
TCF4-260ENST00000627685 PNISRQ8TF01 805 aaKnown RBP10.1□□□□□ -0.79
TCF4-260ENST00000627685 RUNDC1Q96C34 613 aa10.1□□□□□ -0.79
TCF4-260ENST00000627685 SNED1Q8TER0 1413 aa10.09□□□□□ -0.79
TCF4-260ENST00000627685 CHL1O00533 1208 aa10.09□□□□□ -0.79
TCF4-260ENST00000627685 SNRPA1P09661 255 aaKnown RBP10.09□□□□□ -0.79
TCF4-260ENST00000627685 TBC1D9BQ66K14 1250 aa10.09□□□□□ -0.79
TCF4-260ENST00000627685 IL21Q9HBE4 155 aa10.09□□□□□ -0.79
TCF4-260ENST00000627685 PCDHB3Q9Y5E6 796 aa10.09□□□□□ -0.79
TCF4-260ENST00000627685 STARD3NLO95772 234 aa10.08□□□□□ -0.8
TCF4-260ENST00000627685 RIPK4P57078 832 aa10.08□□□□□ -0.8
TCF4-260ENST00000627685 PROSER3Q2NL68 480 aa10.08□□□□□ -0.8
TCF4-260ENST00000627685 RTF1Q92541 710 aaKnown RBP10.08□□□□□ -0.8
TCF4-260ENST00000627685 ZNF516Q92618 1163 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms