RNA–Protein interactions for RNA: ENST00000626315.1

SCARNA15.3-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 122 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.3-201ENST00000626315 NECAB2Q7Z6G3 386 aa4.53□□□□□ -1.68
SCARNA15.3-201ENST00000626315 U2AF1L4Q8WU68 220 aaKnown RBP4.53□□□□□ -1.68
SCARNA15.3-201ENST00000626315 LBHD1Q9BQE6 289 aaPredicted RBP4.53□□□□□ -1.68
SCARNA15.3-201ENST00000626315 TTYH1Q9H313 450 aaPredicted RBP4.53□□□□□ -1.68
SCARNA15.3-201ENST00000626315 ASAP1Q9ULH1 1129 aa4.53□□□□□ -1.68
SCARNA15.3-201ENST00000626315 ZBTB12Q9Y330 459 aaPredicted RBP4.53□□□□□ -1.68
SCARNA15.3-201ENST00000626315 SCN11AQ9UI33 1791 aa4.53□□□□□ -1.69
SCARNA15.3-201ENST00000626315 CGNL1Q0VF96 1302 aa4.52□□□□□ -1.69
SCARNA15.3-201ENST00000626315 FAM205AQ6ZU69 1335 aa4.52□□□□□ -1.69
SCARNA15.3-201ENST00000626315 PCDH11XQ9BZA7 1347 aa4.52□□□□□ -1.69
SCARNA15.3-201ENST00000626315 PCDH11YQ9BZA8 1340 aa4.52□□□□□ -1.69
SCARNA15.3-201ENST00000626315 MUC3AQ02505 3323 aa4.52□□□□□ -1.69
SCARNA15.3-201ENST00000626315 SPTBN4Q9H254 2564 aa4.52□□□□□ -1.69
SCARNA15.3-201ENST00000626315 ADM5C9JUS6 153 aa4.52□□□□□ -1.69
SCARNA15.3-201ENST00000626315 SGPL1O95470 568 aa4.52□□□□□ -1.69
SCARNA15.3-201ENST00000626315 CCL5P13501 91 aa4.52□□□□□ -1.69
SCARNA15.3-201ENST00000626315 TATP17735 454 aaPredicted RBP4.52□□□□□ -1.69
SCARNA15.3-201ENST00000626315 GMPSP49915 693 aaPredicted RBP4.52□□□□□ -1.69
SCARNA15.3-201ENST00000626315 MDM2Q00987 491 aaPredicted RBP4.52□□□□□ -1.69
SCARNA15.3-201ENST00000626315 PDE3AQ14432 1141 aa4.52□□□□□ -1.69
SCARNA15.3-201ENST00000626315 CCDC85BQ15834 202 aaPredicted RBP4.52□□□□□ -1.69
SCARNA15.3-201ENST00000626315 DGLUCYQ7Z3D6 616 aa4.52□□□□□ -1.69
SCARNA15.3-201ENST00000626315 ZKSCAN4Q969J2 545 aaPredicted RBP4.52□□□□□ -1.69
SCARNA15.3-201ENST00000626315 WASHC2AQ641Q2 1341 aa4.51□□□□□ -1.69
SCARNA15.3-201ENST00000626315 MAST4O15021 2626 aa4.51□□□□□ -1.69
SCARNA15.3-201ENST00000626315 MANSC4A6NHS7 340 aaPredicted RBP4.51□□□□□ -1.69
SCARNA15.3-201ENST00000626315 SOBPA7XYQ1 873 aa4.51□□□□□ -1.69
SCARNA15.3-201ENST00000626315 UBE2Q2LH0YL09 131 aa4.51□□□□□ -1.69
SCARNA15.3-201ENST00000626315 ALADP13716 330 aa4.51□□□□□ -1.69
SCARNA15.3-201ENST00000626315 PRMT2P55345 433 aa4.51□□□□□ -1.69
SCARNA15.3-201ENST00000626315 AKNAD1Q5T1N1 836 aa4.51□□□□□ -1.69
SCARNA15.3-201ENST00000626315 NUTM1Q86Y26 1132 aa4.51□□□□□ -1.69
SCARNA15.3-201ENST00000626315 IFNL1Q8IU54 200 aa4.51□□□□□ -1.69
SCARNA15.3-201ENST00000626315 C7orf43Q8WVR3 580 aa4.51□□□□□ -1.69
SCARNA15.3-201ENST00000626315 PAWRQ96IZ0 340 aaKnown RBP4.51□□□□□ -1.69
SCARNA15.3-201ENST00000626315 CHAMP1Q96JM3 812 aa4.51□□□□□ -1.69
SCARNA15.3-201ENST00000626315 MFSD14AQ96MC6 490 aa4.51□□□□□ -1.69
SCARNA15.3-201ENST00000626315 CXXC1Q9P0U4 656 aaPredicted RBP4.51□□□□□ -1.69
SCARNA15.3-201ENST00000626315 CNOT7Q9UIV1 285 aaKnown RBP4.51□□□□□ -1.69
SCARNA15.3-201ENST00000626315 PIK3C2GO75747 1445 aa4.51□□□□□ -1.69
SCARNA15.3-201ENST00000626315 ACACBO00763 2458 aa4.51□□□□□ -1.69
SCARNA15.3-201ENST00000626315 CDHR2Q9BYE9 1310 aa4.5□□□□□ -1.69
SCARNA15.3-201ENST00000626315 DOT1LQ8TEK3 1739 aa4.5□□□□□ -1.69
SCARNA15.3-201ENST00000626315 SRGNP10124 158 aa4.5□□□□□ -1.69
SCARNA15.3-201ENST00000626315 HOXB3P14651 431 aaPredicted RBP4.5□□□□□ -1.69
SCARNA15.3-201ENST00000626315 ST5P78524 1137 aa4.5□□□□□ -1.69
SCARNA15.3-201ENST00000626315 SMAD3P84022 425 aaKnown RBP4.5□□□□□ -1.69
SCARNA15.3-201ENST00000626315 GRIN2CQ14957 1233 aa4.5□□□□□ -1.69
SCARNA15.3-201ENST00000626315 TNIP1Q15025 636 aa4.5□□□□□ -1.69
SCARNA15.3-201ENST00000626315 RBM26Q5T8P6 1007 aaKnown RBP4.5□□□□□ -1.69
SCARNA15.3-201ENST00000626315 POTEEQ6S8J3 1075 aa4.5□□□□□ -1.69
SCARNA15.3-201ENST00000626315 CDCA5Q96FF9 252 aa4.5□□□□□ -1.69
SCARNA15.3-201ENST00000626315 TRIM47Q96LD4 638 aa4.5□□□□□ -1.69
SCARNA15.3-201ENST00000626315 PSMD1Q99460 953 aa4.5□□□□□ -1.69
SCARNA15.3-201ENST00000626315 PRRX2Q99811 253 aa4.5□□□□□ -1.69
SCARNA15.3-201ENST00000626315 ATG3Q9NT62 314 aa4.5□□□□□ -1.69
SCARNA15.3-201ENST00000626315 SETXQ7Z333 2677 aaKnown RBP4.5□□□□□ -1.69
SCARNA15.3-201ENST00000626315 FAM208BQ5VWN6 2430 aa4.5□□□□□ -1.69
SCARNA15.3-201ENST00000626315 MAP3K19Q56UN5 1328 aa4.49□□□□□ -1.69
SCARNA15.3-201ENST00000626315 TAF1LQ8IZX4 1826 aa4.49□□□□□ -1.69
SCARNA15.3-201ENST00000626315 NAV2Q8IVL1 2488 aa4.49□□□□□ -1.69
SCARNA15.3-201ENST00000626315 VPS8Q8N3P4 1428 aa4.49□□□□□ -1.69
SCARNA15.3-201ENST00000626315 ZIC2O95409 532 aaPredicted RBP4.49□□□□□ -1.69
SCARNA15.3-201ENST00000626315 GNRH1P01148 92 aa4.49□□□□□ -1.69
SCARNA15.3-201ENST00000626315 HOXD10P28358 340 aa4.49□□□□□ -1.69
SCARNA15.3-201ENST00000626315 GRK4P32298 578 aa4.49□□□□□ -1.69
SCARNA15.3-201ENST00000626315 CRKLP46109 303 aaKnown RBP4.49□□□□□ -1.69
SCARNA15.3-201ENST00000626315 CRHR2Q13324 411 aa4.49□□□□□ -1.69
SCARNA15.3-201ENST00000626315 SKIV2LQ15477 1246 aaKnown RBP4.49□□□□□ -1.69
SCARNA15.3-201ENST00000626315 CC2D2BQ6DHV5 1058 aa4.49□□□□□ -1.69
SCARNA15.3-201ENST00000626315 RAET1EQ8TD07 263 aa4.49□□□□□ -1.69
SCARNA15.3-201ENST00000626315 IRF2BPLQ9H1B7 796 aa4.49□□□□□ -1.69
SCARNA15.3-201ENST00000626315 NARFQ9UHQ1 456 aa4.49□□□□□ -1.69
SCARNA15.3-201ENST00000626315 CARMIL3Q8ND23 1372 aa4.49□□□□□ -1.69
SCARNA15.3-201ENST00000626315 CENPFP49454 3210 aa4.49□□□□□ -1.69
SCARNA15.3-201ENST00000626315 LAMA2P24043 3122 aaKnown RBP4.48□□□□□ -1.69
SCARNA15.3-201ENST00000626315 PPLO60437 1756 aa4.48□□□□□ -1.69
SCARNA15.3-201ENST00000626315 FER1L6Q2WGJ9 1857 aa4.48□□□□□ -1.69
SCARNA15.3-201ENST00000626315 WDHD1O75717 1129 aaPredicted RBP4.48□□□□□ -1.69
SCARNA15.3-201ENST00000626315 NPR1P16066 1061 aa4.48□□□□□ -1.69
SCARNA15.3-201ENST00000626315 IGFBP4P22692 258 aa4.48□□□□□ -1.69
SCARNA15.3-201ENST00000626315 ALDH1B1P30837 517 aa4.48□□□□□ -1.69
SCARNA15.3-201ENST00000626315 NF2P35240 595 aa4.48□□□□□ -1.69
SCARNA15.3-201ENST00000626315 CXCL9Q07325 125 aa4.48□□□□□ -1.69
SCARNA15.3-201ENST00000626315 MKRN4PQ13434 485 aaPredicted RBP4.48□□□□□ -1.69
SCARNA15.3-201ENST00000626315 FAM50AQ14320 339 aaKnown RBP4.48□□□□□ -1.69
SCARNA15.3-201ENST00000626315 TBC1D10BQ4KMP7 808 aaPredicted RBP4.48□□□□□ -1.69
SCARNA15.3-201ENST00000626315 GRIPAP1Q4V328 841 aa4.48□□□□□ -1.69
SCARNA15.3-201ENST00000626315 OLFM4Q6UX06 510 aa4.48□□□□□ -1.69
SCARNA15.3-201ENST00000626315 MICALL2Q8IY33 904 aa4.48□□□□□ -1.69
SCARNA15.3-201ENST00000626315 TMX4Q9H1E5 349 aaPredicted RBP4.48□□□□□ -1.69
SCARNA15.3-201ENST00000626315 CABP1Q9NZU7 370 aa4.48□□□□□ -1.69
SCARNA15.3-201ENST00000626315 NPC1L1Q9UHC9 1359 aa4.48□□□□□ -1.69
SCARNA15.3-201ENST00000626315 MRC1P22897 1456 aa4.48□□□□□ -1.69
SCARNA15.3-201ENST00000626315 ZFHX2Q9C0A1 2572 aaPredicted RBP4.48□□□□□ -1.69
SCARNA15.3-201ENST00000626315 TTC21BQ7Z4L5 1316 aa4.47□□□□□ -1.69
SCARNA15.3-201ENST00000626315 NCOR2Q9Y618 2525 aa4.47□□□□□ -1.69
SCARNA15.3-201ENST00000626315 CHD6Q8TD26 2715 aa4.47□□□□□ -1.69
SCARNA15.3-201ENST00000626315 PPIP5K2O43314 1243 aa4.47□□□□□ -1.69
SCARNA15.3-201ENST00000626315 KCNQ1P51787 676 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms