RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 UBR3Q6ZT12 1888 aa14.1□□□□□ -0.15
ATRX-213ENST00000624032 SMARCA5O60264 1052 aaPredicted RBP14.1□□□□□ -0.15
ATRX-213ENST00000624032 FOXO4P98177 505 aa14.1□□□□□ -0.15
ATRX-213ENST00000624032 GAS2L3Q86XJ1 694 aa14.1□□□□□ -0.15
ATRX-213ENST00000624032 KLHDC4Q8TBB5 520 aa14.1□□□□□ -0.15
ATRX-213ENST00000624032 GCC1Q96CN9 775 aa14.1□□□□□ -0.15
ATRX-213ENST00000624032 PA2G4Q9UQ80 394 aaKnown RBP14.1□□□□□ -0.15
ATRX-213ENST00000624032 IBTKQ9P2D0 1353 aaPredicted RBP14.1□□□□□ -0.15
ATRX-213ENST00000624032 PCCAP05165 728 aaPredicted RBP14.09□□□□□ -0.15
ATRX-213ENST00000624032 ZBTB38Q8NAP3 1195 aaPredicted RBP14.09□□□□□ -0.15
ATRX-213ENST00000624032 CCDC85AQ96PX6 553 aaPredicted RBP14.09□□□□□ -0.15
ATRX-213ENST00000624032 C4AP0C0L4 1744 aa14.09□□□□□ -0.15
ATRX-213ENST00000624032 NUCB1Q02818 461 aa14.09□□□□□ -0.15
ATRX-213ENST00000624032 RAB3GAP1Q15042 981 aa14.09□□□□□ -0.15
ATRX-213ENST00000624032 LMBR1LQ6UX01 489 aa14.09□□□□□ -0.15
ATRX-213ENST00000624032 CAMKK2Q96RR4 588 aa14.09□□□□□ -0.15
ATRX-213ENST00000624032 ZNF652Q9Y2D9 606 aa14.09□□□□□ -0.15
ATRX-213ENST00000624032 TFCP2L1Q9NZI6 479 aa14.09□□□□□ -0.15
ATRX-213ENST00000624032 HDAC5Q9UQL6 1122 aa14.09□□□□□ -0.15
ATRX-213ENST00000624032 CHMP3Q9Y3E7 222 aa14.09□□□□□ -0.15
ATRX-213ENST00000624032 SURF6O75683 361 aaKnown RBP14.08□□□□□ -0.16
ATRX-213ENST00000624032 MTX1Q13505 466 aa14.08□□□□□ -0.16
ATRX-213ENST00000624032 NUTM1Q86Y26 1132 aa14.08□□□□□ -0.16
ATRX-213ENST00000624032 CLEC4GQ6UXB4 293 aa14.08□□□□□ -0.16
ATRX-213ENST00000624032 CHD1LQ86WJ1 897 aa14.08□□□□□ -0.16
ATRX-213ENST00000624032 AKT1S1Q96B36 256 aa14.08□□□□□ -0.16
ATRX-213ENST00000624032 USP42Q9H9J4 1324 aaKnown RBP14.08□□□□□ -0.16
ATRX-213ENST00000624032 SCN7AQ01118 1682 aa14.07□□□□□ -0.16
ATRX-213ENST00000624032 HCLS1P14317 486 aaPredicted RBP14.07□□□□□ -0.16
ATRX-213ENST00000624032 C16orf71Q8IYS4 520 aaPredicted RBP14.07□□□□□ -0.16
ATRX-213ENST00000624032 UTP14AQ9BVJ6 771 aaKnown RBP14.07□□□□□ -0.16
ATRX-213ENST00000624032 IRS4O14654 1257 aaPredicted RBP14.06□□□□□ -0.16
ATRX-213ENST00000624032 SF3B2Q13435 895 aaKnown RBP14.06□□□□□ -0.16
ATRX-213ENST00000624032 RABL6Q3YEC7 729 aaPredicted RBP14.06□□□□□ -0.16
ATRX-213ENST00000624032 CCDC173Q0VFZ6 552 aa14.06□□□□□ -0.16
ATRX-213ENST00000624032 CCDC24Q8N4L8 307 aa14.06□□□□□ -0.16
ATRX-213ENST00000624032 SIL1Q9H173 461 aa14.06□□□□□ -0.16
ATRX-213ENST00000624032 NTSR2O95665 410 aa14.06□□□□□ -0.16
ATRX-213ENST00000624032 SSFA2P28290 1259 aa14.06□□□□□ -0.16
ATRX-213ENST00000624032 ADRA2BP18089 450 aa14.05□□□□□ -0.16
ATRX-213ENST00000624032 PARP10Q53GL7 1025 aa14.05□□□□□ -0.16
ATRX-213ENST00000624032 COL23A1Q86Y22 540 aaPredicted RBP14.05□□□□□ -0.16
ATRX-213ENST00000624032 RFX5P48382 616 aaPredicted RBP14.05□□□□□ -0.16
ATRX-213ENST00000624032 SH3TC1Q8TE82 1336 aa14.04□□□□□ -0.16
ATRX-213ENST00000624032 GYS1P13807 737 aa14.04□□□□□ -0.16
ATRX-213ENST00000624032 OTUD7AQ8TE49 926 aaPredicted RBP14.04□□□□□ -0.16
ATRX-213ENST00000624032 ANP32BQ92688 251 aaKnown RBP14.04□□□□□ -0.16
ATRX-213ENST00000624032 ZNF594Q96JF6 807 aaPredicted RBP14.04□□□□□ -0.16
ATRX-213ENST00000624032 SETDB2Q96T68 719 aa14.04□□□□□ -0.16
ATRX-213ENST00000624032 TUBGCP6Q96RT7 1819 aa14.04□□□□□ -0.16
ATRX-213ENST00000624032 CDHR2Q9BYE9 1310 aa14.04□□□□□ -0.16
ATRX-213ENST00000624032 GOLGA6L22H0YM25 854 aa14.04□□□□□ -0.16
ATRX-213ENST00000624032 BAG6P46379 1132 aa14.04□□□□□ -0.16
ATRX-213ENST00000624032 ERFEQ4G0M1 354 aa14.04□□□□□ -0.16
ATRX-213ENST00000624032 IL1RAPL2Q9NP60 686 aa14.04□□□□□ -0.16
ATRX-213ENST00000624032 NFIXQ14938 502 aa14.04□□□□□ -0.16
ATRX-213ENST00000624032 PPP1R9BQ96SB3 815 aa14.04□□□□□ -0.16
ATRX-213ENST00000624032 OS9Q13438 667 aaPredicted RBP14.03□□□□□ -0.16
ATRX-213ENST00000624032 PDCL3Q9H2J4 239 aa14.03□□□□□ -0.16
ATRX-213ENST00000624032 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.03□□□□□ -0.16
ATRX-213ENST00000624032 RGPD3A6NKT7 1758 aaPredicted RBP14.03□□□□□ -0.16
ATRX-213ENST00000624032 RGPD4Q7Z3J3 1758 aa14.03□□□□□ -0.16
ATRX-213ENST00000624032 NASPP49321 788 aaPredicted RBP14.03□□□□□ -0.16
ATRX-213ENST00000624032 PTPN12Q05209 780 aaKnown RBP14.03□□□□□ -0.16
ATRX-213ENST00000624032 KIAA1211Q6ZU35 1233 aa14.03□□□□□ -0.16
ATRX-213ENST00000624032 PLA2G12BQ9BX93 195 aa14.03□□□□□ -0.16
ATRX-213ENST00000624032 BMP2KLQ5H9B9 411 aa14.02□□□□□ -0.16
ATRX-213ENST00000624032 ZSCAN30Q86W11 494 aa14.02□□□□□ -0.16
ATRX-213ENST00000624032 TTLL11Q8NHH1 800 aa14.02□□□□□ -0.16
ATRX-213ENST00000624032 LRRCC1Q9C099 1032 aa14.02□□□□□ -0.16
ATRX-213ENST00000624032 K7ELQ4 463 aaPredicted RBP14.02□□□□□ -0.17
ATRX-213ENST00000624032 PDE8AO60658 829 aa14.02□□□□□ -0.17
ATRX-213ENST00000624032 CTSWP56202 376 aa14.02□□□□□ -0.17
ATRX-213ENST00000624032 NBPF5PQ86XG9 351 aaPredicted RBP14.02□□□□□ -0.17
ATRX-213ENST00000624032 GREM2Q9H772 168 aa14.02□□□□□ -0.17
ATRX-213ENST00000624032 PNPLA7Q6ZV29 1317 aa14.02□□□□□ -0.17
ATRX-213ENST00000624032 CSF1RP07333 972 aa14.01□□□□□ -0.17
ATRX-213ENST00000624032 GTF2E1P29083 439 aaPredicted RBP14.01□□□□□ -0.17
ATRX-213ENST00000624032 C3orf67Q6ZVT6 689 aa14.01□□□□□ -0.17
ATRX-213ENST00000624032 RHPN1Q8TCX5 695 aa14.01□□□□□ -0.17
ATRX-213ENST00000624032 KIF2CQ99661 725 aa14.01□□□□□ -0.17
ATRX-213ENST00000624032 G3BP1Q13283 466 aaKnown RBP eCLIP14.01□□□□□ -0.17
ATRX-213ENST00000624032 FOXD4L1Q9NU39 408 aa14.01□□□□□ -0.17
ATRX-213ENST00000624032 DDX60Q8IY21 1712 aaKnown RBP14.01□□□□□ -0.17
ATRX-213ENST00000624032 ABCC12Q96J65 1359 aa14□□□□□ -0.17
ATRX-213ENST00000624032 RGL2O15211 777 aa14□□□□□ -0.17
ATRX-213ENST00000624032 SASH1O94885 1247 aa14□□□□□ -0.17
ATRX-213ENST00000624032 SLC15A2Q16348 729 aa14□□□□□ -0.17
ATRX-213ENST00000624032 PUS3Q9BZE2 481 aaKnown RBP14□□□□□ -0.17
ATRX-213ENST00000624032 COPRSQ9NQ92 184 aa14□□□□□ -0.17
ATRX-213ENST00000624032 RAB11FIP3O75154 756 aa14□□□□□ -0.17
ATRX-213ENST00000624032 CCDC57Q2TAC2 916 aa14□□□□□ -0.17
ATRX-213ENST00000624032 MSL1Q68DK7 614 aa14□□□□□ -0.17
ATRX-213ENST00000624032 MYH3P11055 1940 aa14□□□□□ -0.17
ATRX-213ENST00000624032 OFD1O75665 1012 aa13.99□□□□□ -0.17
ATRX-213ENST00000624032 MSNP26038 577 aaKnown RBP13.99□□□□□ -0.17
ATRX-213ENST00000624032 KLHL40Q2TBA0 621 aa13.99□□□□□ -0.17
ATRX-213ENST00000624032 LRRC24Q50LG9 513 aa13.99□□□□□ -0.17
ATRX-213ENST00000624032 TSHZ3Q63HK5 1081 aa13.99□□□□□ -0.17
ATRX-213ENST00000624032 PDGFDQ9GZP0 370 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms