RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 FAM161AQ3B820 660 aa22.11■■□□□ 1.13
PTCHD3-202ENST00000622555 SLC10A5Q5PT55 438 aa22.11■■□□□ 1.13
PTCHD3-202ENST00000622555 PA2G4Q9UQ80 394 aaKnown RBP22.11■■□□□ 1.13
PTCHD3-202ENST00000622555 MMP10P09238 476 aa22.11■■□□□ 1.13
PTCHD3-202ENST00000622555 PRR5LQ6MZQ0 368 aa22.11■■□□□ 1.13
PTCHD3-202ENST00000622555 APBB1O00213 710 aa22.1■■□□□ 1.13
PTCHD3-202ENST00000622555 RFX5P48382 616 aaPredicted RBP22.1■■□□□ 1.13
PTCHD3-202ENST00000622555 CCDC57Q2TAC2 916 aa22.1■■□□□ 1.13
PTCHD3-202ENST00000622555 PARP3Q9Y6F1 533 aa22.1■■□□□ 1.13
PTCHD3-202ENST00000622555 NRXN2Q9P2S2 1712 aa22.09■■□□□ 1.13
PTCHD3-202ENST00000622555 ST5P78524 1137 aa22.09■■□□□ 1.13
PTCHD3-202ENST00000622555 KLHDC4Q8TBB5 520 aa22.09■■□□□ 1.13
PTCHD3-202ENST00000622555 GREM2Q9H772 168 aa22.09■■□□□ 1.13
PTCHD3-202ENST00000622555 PDZRN3Q9UPQ7 1066 aa22.09■■□□□ 1.13
PTCHD3-202ENST00000622555 IFIT5Q13325 482 aaKnown RBP22.09■■□□□ 1.13
PTCHD3-202ENST00000622555 CCDC152Q4G0S7 254 aa22.09■■□□□ 1.13
PTCHD3-202ENST00000622555 ANKRD45Q5TZF3 282 aa22.09■■□□□ 1.13
PTCHD3-202ENST00000622555 NOP58Q9Y2X3 529 aaKnown RBP22.09■■□□□ 1.13
PTCHD3-202ENST00000622555 TNRC6CQ9HCJ0 1690 aaKnown RBP22.08■■□□□ 1.13
PTCHD3-202ENST00000622555 PTPN12Q05209 780 aaKnown RBP22.08■■□□□ 1.12
PTCHD3-202ENST00000622555 OS9Q13438 667 aaPredicted RBP22.08■■□□□ 1.12
PTCHD3-202ENST00000622555 HSP90AB4PQ58FF6 505 aa22.08■■□□□ 1.12
PTCHD3-202ENST00000622555 C3orf67Q6ZVT6 689 aa22.08■■□□□ 1.12
PTCHD3-202ENST00000622555 SLC16A10Q8TF71 515 aa22.08■■□□□ 1.12
PTCHD3-202ENST00000622555 COPRSQ9NQ92 184 aa22.08■■□□□ 1.12
PTCHD3-202ENST00000622555 ITGA6P23229 1130 aa22.07■■□□□ 1.12
PTCHD3-202ENST00000622555 NUCB1Q02818 461 aa22.07■■□□□ 1.12
PTCHD3-202ENST00000622555 R3HDM1Q15032 1099 aaKnown RBP22.07■■□□□ 1.12
PTCHD3-202ENST00000622555 NLRP3Q96P20 1036 aa22.07■■□□□ 1.12
PTCHD3-202ENST00000622555 SIL1Q9H173 461 aa22.07■■□□□ 1.12
PTCHD3-202ENST00000622555 ZBTB47Q9UFB7 747 aaPredicted RBP22.07■■□□□ 1.12
PTCHD3-202ENST00000622555 ANKRD18BA2A2Z9 1011 aa22.06■■□□□ 1.12
PTCHD3-202ENST00000622555 G3BP1Q13283 466 aaKnown RBP eCLIP22.06■■□□□ 1.12
PTCHD3-202ENST00000622555 TAF7LQ5H9L4 462 aa22.06■■□□□ 1.12
PTCHD3-202ENST00000622555 RAB11FIP3O75154 756 aa22.06■■□□□ 1.12
PTCHD3-202ENST00000622555 SF3B3Q15393 1217 aaKnown RBP22.06■■□□□ 1.12
PTCHD3-202ENST00000622555 ZNF594Q96JF6 807 aaPredicted RBP22.06■■□□□ 1.12
PTCHD3-202ENST00000622555 RIC1Q4ADV7 1423 aa22.06■■□□□ 1.12
PTCHD3-202ENST00000622555 CHD1LQ86WJ1 897 aa22.05■■□□□ 1.12
PTCHD3-202ENST00000622555 SKAP1Q86WV1 359 aa22.05■■□□□ 1.12
PTCHD3-202ENST00000622555 RTL9Q8NET4 1388 aa22.04■■□□□ 1.12
PTCHD3-202ENST00000622555 LRRCC1Q9C099 1032 aa22.04■■□□□ 1.12
PTCHD3-202ENST00000622555 LNPKQ9C0E8 428 aa22.04■■□□□ 1.12
PTCHD3-202ENST00000622555 BCL11AQ9H165 835 aa22.04■■□□□ 1.12
PTCHD3-202ENST00000622555 SPEF2Q9C093 1822 aa22.04■■□□□ 1.12
PTCHD3-202ENST00000622555 ANKRD31Q8N7Z5 1873 aa22.03■■□□□ 1.12
PTCHD3-202ENST00000622555 SMARCA5O60264 1052 aaPredicted RBP22.03■■□□□ 1.12
PTCHD3-202ENST00000622555 ERC1Q8IUD2 1116 aa22.03■■□□□ 1.12
PTCHD3-202ENST00000622555 TAF1P21675 1872 aa22.03■■□□□ 1.12
PTCHD3-202ENST00000622555 SEC31BQ9NQW1 1179 aa22.03■■□□□ 1.12
PTCHD3-202ENST00000622555 RHPN1Q8TCX5 695 aa22.02■■□□□ 1.12
PTCHD3-202ENST00000622555 KIF1BPQ96EK5 621 aa22.02■■□□□ 1.12
PTCHD3-202ENST00000622555 PSDA5PKW4 1024 aaPredicted RBP22.01■■□□□ 1.11
PTCHD3-202ENST00000622555 ZBTB7AO95365 584 aa22.01■■□□□ 1.11
PTCHD3-202ENST00000622555 EYA2O00167 538 aa22■■□□□ 1.11
PTCHD3-202ENST00000622555 CIAO1O76071 339 aa22■■□□□ 1.11
PTCHD3-202ENST00000622555 RGS3P49796 1198 aa22■■□□□ 1.11
PTCHD3-202ENST00000622555 LRRC24Q50LG9 513 aa22■■□□□ 1.11
PTCHD3-202ENST00000622555 CDC5LQ99459 802 aaKnown RBP22■■□□□ 1.11
PTCHD3-202ENST00000622555 PUS3Q9BZE2 481 aaKnown RBP22■■□□□ 1.11
PTCHD3-202ENST00000622555 IL1RAPL2Q9NP60 686 aa22■■□□□ 1.11
PTCHD3-202ENST00000622555 LRP5O75197 1615 aa21.99■■□□□ 1.11
PTCHD3-202ENST00000622555 LDHAL6AQ6ZMR3 332 aa21.99■■□□□ 1.11
PTCHD3-202ENST00000622555 ATG9AQ7Z3C6 839 aa21.99■■□□□ 1.11
PTCHD3-202ENST00000622555 BRIP1Q9BX63 1249 aa21.99■■□□□ 1.11
PTCHD3-202ENST00000622555 MTFR1LQ9H019 292 aa21.99■■□□□ 1.11
PTCHD3-202ENST00000622555 FBXO3Q9UK99 471 aa21.99■■□□□ 1.11
PTCHD3-202ENST00000622555 SASH1O94885 1247 aa21.98■■□□□ 1.11
PTCHD3-202ENST00000622555 IGHMBP2P38935 993 aaKnown RBP21.98■■□□□ 1.11
PTCHD3-202ENST00000622555 IL15P40933 162 aaPredicted RBP21.98■■□□□ 1.11
PTCHD3-202ENST00000622555 DDX46Q7L014 1031 aaKnown RBP21.98■■□□□ 1.11
PTCHD3-202ENST00000622555 CNNM1Q9NRU3 951 aa21.98■■□□□ 1.11
PTCHD3-202ENST00000622555 COL4A1P02462 1669 aa21.98■■□□□ 1.11
PTCHD3-202ENST00000622555 PDE4AP27815 886 aa21.97■■□□□ 1.11
PTCHD3-202ENST00000622555 RPGRQ92834 1020 aaKnown RBP21.97■■□□□ 1.11
PTCHD3-202ENST00000622555 MPHOSPH8Q99549 860 aa21.97■■□□□ 1.11
PTCHD3-202ENST00000622555 ATF5Q9Y2D1 282 aaPredicted RBP21.97■■□□□ 1.11
PTCHD3-202ENST00000622555 CRY2Q49AN0 593 aa21.97■■□□□ 1.11
PTCHD3-202ENST00000622555 ANKRD18AQ8IVF6 992 aa21.97■■□□□ 1.11
PTCHD3-202ENST00000622555 TFCP2Q12800 502 aa21.96■■□□□ 1.11
PTCHD3-202ENST00000622555 KLRG2A4D1S0 409 aaPredicted RBP21.95■■□□□ 1.1
PTCHD3-202ENST00000622555 PDE6BP35913 854 aa21.95■■□□□ 1.1
PTCHD3-202ENST00000622555 C16orf71Q8IYS4 520 aaPredicted RBP21.95■■□□□ 1.1
PTCHD3-202ENST00000622555 CLASRPQ8N2M8 674 aaKnown RBP21.95■■□□□ 1.1
PTCHD3-202ENST00000622555 COL11A2P13942 1736 aaPredicted RBP21.95■■□□□ 1.1
PTCHD3-202ENST00000622555 CELF1Q92879 486 aaKnown RBP21.94■■□□□ 1.1
PTCHD3-202ENST00000622555 RBM17Q96I25 401 aaKnown RBP21.94■■□□□ 1.1
PTCHD3-202ENST00000622555 RIPOR2Q9Y4F9 1068 aa21.94■■□□□ 1.1
PTCHD3-202ENST00000622555 POLD1P28340 1107 aa21.94■■□□□ 1.1
PTCHD3-202ENST00000622555 CEP126Q9P2H0 1117 aa21.94■■□□□ 1.1
PTCHD3-202ENST00000622555 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.94■■□□□ 1.1
PTCHD3-202ENST00000622555 RPS8P62241 208 aaKnown RBP21.93■■□□□ 1.1
PTCHD3-202ENST00000622555 METTL24Q5JXM2 366 aa21.93■■□□□ 1.1
PTCHD3-202ENST00000622555 OTUD7AQ8TE49 926 aaPredicted RBP21.93■■□□□ 1.1
PTCHD3-202ENST00000622555 GRAPQ13588 217 aa21.92■■□□□ 1.1
PTCHD3-202ENST00000622555 AACSQ86V21 672 aa21.92■■□□□ 1.1
PTCHD3-202ENST00000622555 GRAPLQ8TC17 118 aaPredicted RBP21.92■■□□□ 1.1
PTCHD3-202ENST00000622555 BSDC1Q9NW68 430 aaPredicted RBP21.92■■□□□ 1.1
PTCHD3-202ENST00000622555 MROH5Q6ZUA9 1318 aa21.91■■□□□ 1.1
PTCHD3-202ENST00000622555 C10orf71Q711Q0 1435 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms