RNA–Protein interactions for RNA: ENST00000622329.1

RNU6-538P-201, Transcript of RNA, U6 small nuclear 538, pseudogene, humanhuman

BASIC

Gene RNU6-538P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-538P-201ENST00000622329 CCINQ13939 588 aa8.38□□□□□ -1.07
RNU6-538P-201ENST00000622329 HDGFL1Q5TGJ6 251 aa8.38□□□□□ -1.07
RNU6-538P-201ENST00000622329 FBXO11Q86XK2 927 aa8.38□□□□□ -1.07
RNU6-538P-201ENST00000622329 AEBP1Q8IUX7 1158 aa8.38□□□□□ -1.07
RNU6-538P-201ENST00000622329 NGLY1Q96IV0 654 aa8.38□□□□□ -1.07
RNU6-538P-201ENST00000622329 MEGF10Q96KG7 1140 aa8.38□□□□□ -1.07
RNU6-538P-201ENST00000622329 CHMP3Q9Y3E7 222 aa8.38□□□□□ -1.07
RNU6-538P-201ENST00000622329 A6NJR5 290 aa8.37□□□□□ -1.07
RNU6-538P-201ENST00000622329 TGFBR3LH3BV60 316 aa8.37□□□□□ -1.07
RNU6-538P-201ENST00000622329 RGS9O75916 674 aaPredicted RBP8.37□□□□□ -1.07
RNU6-538P-201ENST00000622329 RBM25P49756 843 aaKnown RBP8.37□□□□□ -1.07
RNU6-538P-201ENST00000622329 PERM1Q5SV97 790 aa8.37□□□□□ -1.07
RNU6-538P-201ENST00000622329 USP21Q9UK80 565 aa8.37□□□□□ -1.07
RNU6-538P-201ENST00000622329 LGR5O75473 907 aa8.36□□□□□ -1.07
RNU6-538P-201ENST00000622329 INPP5BP32019 993 aa8.36□□□□□ -1.07
RNU6-538P-201ENST00000622329 IREB2P48200 963 aaKnown RBP8.36□□□□□ -1.07
RNU6-538P-201ENST00000622329 MFAP1P55081 439 aaKnown RBP8.36□□□□□ -1.07
RNU6-538P-201ENST00000622329 RTN1Q16799 776 aa8.36□□□□□ -1.07
RNU6-538P-201ENST00000622329 FAM35AQ86V20 835 aa8.36□□□□□ -1.07
RNU6-538P-201ENST00000622329 MAP3K6O95382 1288 aa8.35□□□□□ -1.07
RNU6-538P-201ENST00000622329 CPB1P15086 417 aa8.35□□□□□ -1.07
RNU6-538P-201ENST00000622329 DTWD1Q8N5C7 304 aa8.35□□□□□ -1.07
RNU6-538P-201ENST00000622329 TRPM4Q8TD43 1214 aa8.35□□□□□ -1.07
RNU6-538P-201ENST00000622329 IFT43Q96FT9 208 aa8.35□□□□□ -1.07
RNU6-538P-201ENST00000622329 FRRS1LQ9P0K9 344 aa8.35□□□□□ -1.07
RNU6-538P-201ENST00000622329 RNF112Q9ULX5 631 aa8.35□□□□□ -1.07
RNU6-538P-201ENST00000622329 CHMP7Q8WUX9 453 aaPredicted RBP8.34□□□□□ -1.07
RNU6-538P-201ENST00000622329 TARSP26639 723 aaKnown RBP8.33□□□□□ -1.08
RNU6-538P-201ENST00000622329 HIF1AQ16665 826 aa8.33□□□□□ -1.08
RNU6-538P-201ENST00000622329 DHX32Q7L7V1 743 aaKnown RBP8.33□□□□□ -1.08
RNU6-538P-201ENST00000622329 TTC9Q92623 222 aa8.33□□□□□ -1.08
RNU6-538P-201ENST00000622329 KLK14Q9P0G3 267 aa8.33□□□□□ -1.08
RNU6-538P-201ENST00000622329 DLL1O00548 723 aa8.32□□□□□ -1.08
RNU6-538P-201ENST00000622329 SEC13P55735 322 aa8.32□□□□□ -1.08
RNU6-538P-201ENST00000622329 PRR23CQ6ZRP0 262 aa8.32□□□□□ -1.08
RNU6-538P-201ENST00000622329 DZIP1LQ8IYY4 767 aaKnown RBP8.32□□□□□ -1.08
RNU6-538P-201ENST00000622329 PNMA5Q96PV4 448 aa8.32□□□□□ -1.08
RNU6-538P-201ENST00000622329 IDH3AP50213 366 aa8.31□□□□□ -1.08
RNU6-538P-201ENST00000622329 MLLT1Q03111 559 aaPredicted RBP8.31□□□□□ -1.08
RNU6-538P-201ENST00000622329 CRTC2Q53ET0 693 aaPredicted RBP8.31□□□□□ -1.08
RNU6-538P-201ENST00000622329 IGF2-ASQ6U949 168 aa8.31□□□□□ -1.08
RNU6-538P-201ENST00000622329 KRT25Q7Z3Z0 450 aa8.31□□□□□ -1.08
RNU6-538P-201ENST00000622329 FOXD4L4Q8WXT5 416 aaPredicted RBP8.31□□□□□ -1.08
RNU6-538P-201ENST00000622329 QTRT2Q9H974 415 aaKnown RBP8.31□□□□□ -1.08
RNU6-538P-201ENST00000622329 MAFBQ9Y5Q3 323 aaPredicted RBP8.31□□□□□ -1.08
RNU6-538P-201ENST00000622329 KRTAP4-8A0A0G2JLE6 195 aa8.3□□□□□ -1.08
RNU6-538P-201ENST00000622329 E9PSI1 815 aa8.3□□□□□ -1.08
RNU6-538P-201ENST00000622329 RASA1P20936 1047 aa8.3□□□□□ -1.08
RNU6-538P-201ENST00000622329 GPLD1P80108 840 aa8.3□□□□□ -1.08
RNU6-538P-201ENST00000622329 PTK7Q13308 1070 aa8.3□□□□□ -1.08
RNU6-538P-201ENST00000622329 IGFBP4P22692 258 aa8.29□□□□□ -1.08
RNU6-538P-201ENST00000622329 KANK4Q5T7N3 995 aaPredicted RBP8.29□□□□□ -1.08
RNU6-538P-201ENST00000622329 WWC1Q8IX03 1113 aa8.29□□□□□ -1.08
RNU6-538P-201ENST00000622329 GZF1Q9H116 711 aaPredicted RBP8.29□□□□□ -1.08
RNU6-538P-201ENST00000622329 TFIP11Q9UBB9 837 aaKnown RBP8.29□□□□□ -1.08
RNU6-538P-201ENST00000622329 OPLAHO14841 1288 aa8.28□□□□□ -1.08
RNU6-538P-201ENST00000622329 SASH3O75995 380 aa8.28□□□□□ -1.08
RNU6-538P-201ENST00000622329 ALX3O95076 343 aa8.28□□□□□ -1.08
RNU6-538P-201ENST00000622329 WFDC8Q8IUA0 241 aa8.28□□□□□ -1.08
RNU6-538P-201ENST00000622329 ZNF428Q96B54 188 aa8.28□□□□□ -1.08
RNU6-538P-201ENST00000622329 GOLGA2P5Q9HBQ8 144 aa8.28□□□□□ -1.08
RNU6-538P-201ENST00000622329 MCTP1Q6DN14 999 aa8.27□□□□□ -1.09
RNU6-538P-201ENST00000622329 ELMSAN1Q6PJG2 1045 aa8.27□□□□□ -1.09
RNU6-538P-201ENST00000622329 HFE2Q6ZVN8 426 aa8.27□□□□□ -1.09
RNU6-538P-201ENST00000622329 FNBP4Q8N3X1 1017 aaPredicted RBP8.27□□□□□ -1.09
RNU6-538P-201ENST00000622329 CHMP4AQ9BY43 222 aa8.27□□□□□ -1.09
RNU6-538P-201ENST00000622329 SMG9Q9H0W8 520 aaKnown RBP8.27□□□□□ -1.09
RNU6-538P-201ENST00000622329 USP20Q9Y2K6 914 aa8.27□□□□□ -1.09
RNU6-538P-201ENST00000622329 DPYDQ12882 1025 aa8.26□□□□□ -1.09
RNU6-538P-201ENST00000622329 DGKZQ13574 1117 aa8.26□□□□□ -1.09
RNU6-538P-201ENST00000622329 PCSK7Q16549 785 aa8.26□□□□□ -1.09
RNU6-538P-201ENST00000622329 Q6ZS46 218 aa8.26□□□□□ -1.09
RNU6-538P-201ENST00000622329 CLUAP1Q96AJ1 413 aa8.26□□□□□ -1.09
RNU6-538P-201ENST00000622329 C11orf16Q9NQ32 467 aa8.26□□□□□ -1.09
RNU6-538P-201ENST00000622329 SERPINA10Q9UK55 444 aa8.26□□□□□ -1.09
RNU6-538P-201ENST00000622329 MICAL2O94851 1124 aa8.25□□□□□ -1.09
RNU6-538P-201ENST00000622329 MED26O95402 600 aa8.25□□□□□ -1.09
RNU6-538P-201ENST00000622329 RARAP10276 462 aa8.25□□□□□ -1.09
RNU6-538P-201ENST00000622329 ARSDP51689 593 aa8.25□□□□□ -1.09
RNU6-538P-201ENST00000622329 GLMNQ92990 594 aa8.25□□□□□ -1.09
RNU6-538P-201ENST00000622329 CCDC97Q96F63 343 aaPredicted RBP8.25□□□□□ -1.09
RNU6-538P-201ENST00000622329 LRFN2Q9ULH4 789 aa8.25□□□□□ -1.09
RNU6-538P-201ENST00000622329 F8W735 103 aaPredicted RBP8.24□□□□□ -1.09
RNU6-538P-201ENST00000622329 EGFRP00533 1210 aa8.24□□□□□ -1.09
RNU6-538P-201ENST00000622329 EPB42P16452 691 aa8.24□□□□□ -1.09
RNU6-538P-201ENST00000622329 FSTP19883 344 aa8.24□□□□□ -1.09
RNU6-538P-201ENST00000622329 WEE1P30291 646 aa8.24□□□□□ -1.09
RNU6-538P-201ENST00000622329 CD97P48960 835 aa8.24□□□□□ -1.09
RNU6-538P-201ENST00000622329 NRLP54845 237 aa8.24□□□□□ -1.09
RNU6-538P-201ENST00000622329 TMEM130Q8N3G9 435 aa8.24□□□□□ -1.09
RNU6-538P-201ENST00000622329 HINFPQ9BQA5 517 aa8.24□□□□□ -1.09
RNU6-538P-201ENST00000622329 TM4SF5O14894 197 aa8.23□□□□□ -1.09
RNU6-538P-201ENST00000622329 MYO19Q96H55 970 aa8.23□□□□□ -1.09
RNU6-538P-201ENST00000622329 AKTIPQ9H8T0 292 aa8.23□□□□□ -1.09
RNU6-538P-201ENST00000622329 TLR7Q9NYK1 1049 aaKnown RBP8.23□□□□□ -1.09
RNU6-538P-201ENST00000622329 COL17A1Q9UMD9 1497 aaPredicted RBP8.23□□□□□ -1.09
RNU6-538P-201ENST00000622329 USP17L15C9J2P7 530 aa8.22□□□□□ -1.09
RNU6-538P-201ENST00000622329 USP17L10C9JJH3 530 aa8.22□□□□□ -1.09
RNU6-538P-201ENST00000622329 USP17L13C9JLJ4 530 aa8.22□□□□□ -1.09
RNU6-538P-201ENST00000622329 USP17L12C9JPN9 530 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms