RNA–Protein interactions for RNA: ENST00000622143.1

SRSF4-207, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-207ENST00000622143 PHRF1Q9P1Y6 1649 aaKnown RBP7.3□□□□□ -1.24
SRSF4-207ENST00000622143 RPGRIP1LQ68CZ1 1315 aa7.3□□□□□ -1.24
SRSF4-207ENST00000622143 SSH2Q76I76 1423 aa7.3□□□□□ -1.24
SRSF4-207ENST00000622143 POM121CA8CG34 1229 aa7.3□□□□□ -1.24
SRSF4-207ENST00000622143 WDR4P57081 412 aaKnown RBP7.3□□□□□ -1.24
SRSF4-207ENST00000622143 PTK2Q05397 1052 aa7.3□□□□□ -1.24
SRSF4-207ENST00000622143 GPSM3Q9Y4H4 160 aa7.3□□□□□ -1.24
SRSF4-207ENST00000622143 DLC1Q96QB1 1528 aa7.3□□□□□ -1.24
SRSF4-207ENST00000622143 GPRASP1Q5JY77 1395 aa7.3□□□□□ -1.24
SRSF4-207ENST00000622143 PRR36Q9H6K5 1346 aa7.29□□□□□ -1.24
SRSF4-207ENST00000622143 ACIN1Q9UKV3 1341 aaKnown RBP7.29□□□□□ -1.24
SRSF4-207ENST00000622143 ZBBXA8MT70 800 aa7.29□□□□□ -1.24
SRSF4-207ENST00000622143 FSHRP23945 695 aa7.29□□□□□ -1.24
SRSF4-207ENST00000622143 NGDNQ8NEJ9 315 aaKnown RBP7.29□□□□□ -1.24
SRSF4-207ENST00000622143 ZNF526Q8TF50 670 aaPredicted RBP7.29□□□□□ -1.24
SRSF4-207ENST00000622143 ITPKCQ96DU7 683 aa7.29□□□□□ -1.24
SRSF4-207ENST00000622143 SLC10A4Q96EP9 437 aa7.29□□□□□ -1.24
SRSF4-207ENST00000622143 ZFAND3Q9H8U3 227 aa7.29□□□□□ -1.24
SRSF4-207ENST00000622143 SENP2Q9HC62 589 aa7.29□□□□□ -1.24
SRSF4-207ENST00000622143 STK32BQ9NY57 414 aa7.29□□□□□ -1.24
SRSF4-207ENST00000622143 POGKQ9P215 609 aa7.29□□□□□ -1.24
SRSF4-207ENST00000622143 SHANK3Q9BYB0 1731 aa7.29□□□□□ -1.24
SRSF4-207ENST00000622143 CEP350Q5VT06 3117 aa7.29□□□□□ -1.24
SRSF4-207ENST00000622143 NR1H3Q13133 447 aa7.28□□□□□ -1.24
SRSF4-207ENST00000622143 WASHC4Q2M389 1173 aa7.28□□□□□ -1.24
SRSF4-207ENST00000622143 VASH1Q7L8A9 365 aaPredicted RBP7.28□□□□□ -1.24
SRSF4-207ENST00000622143 TCP11L2Q8N4U5 519 aa7.28□□□□□ -1.24
SRSF4-207ENST00000622143 KIFC2Q96AC6 838 aa7.28□□□□□ -1.24
SRSF4-207ENST00000622143 KRTAP9-2Q9BYQ4 174 aa7.28□□□□□ -1.24
SRSF4-207ENST00000622143 KRTAP9-6A0A140TA67 174 aa7.27□□□□□ -1.25
SRSF4-207ENST00000622143 CFAP70Q5T0N1 1121 aa7.27□□□□□ -1.25
SRSF4-207ENST00000622143 ADAM32Q8TC27 787 aa7.27□□□□□ -1.25
SRSF4-207ENST00000622143 PEAK1Q9H792 1746 aa7.27□□□□□ -1.25
SRSF4-207ENST00000622143 LRRC37A3O60309 1634 aa7.27□□□□□ -1.25
SRSF4-207ENST00000622143 OVOS2A0A0G2JMS6 1433 aa7.27□□□□□ -1.25
SRSF4-207ENST00000622143 OVOS2A0A0J9YW53 1432 aa7.27□□□□□ -1.25
SRSF4-207ENST00000622143 PIK3C2GO75747 1445 aa7.27□□□□□ -1.25
SRSF4-207ENST00000622143 OVOS2Q6IE36 1432 aa7.27□□□□□ -1.25
SRSF4-207ENST00000622143 ZIC2O95409 532 aaPredicted RBP7.26□□□□□ -1.25
SRSF4-207ENST00000622143 MRPL14Q6P1L8 145 aaKnown RBP7.26□□□□□ -1.25
SRSF4-207ENST00000622143 DZIP3Q86Y13 1208 aaKnown RBP7.26□□□□□ -1.25
SRSF4-207ENST00000622143 MTFR1LQ9H019 292 aa7.26□□□□□ -1.25
SRSF4-207ENST00000622143 TRAK1Q9UPV9 953 aa7.26□□□□□ -1.25
SRSF4-207ENST00000622143 ANKARQ7Z5J8 1434 aa7.26□□□□□ -1.25
SRSF4-207ENST00000622143 SBF2Q86WG5 1849 aa7.25□□□□□ -1.25
SRSF4-207ENST00000622143 PARP4Q9UKK3 1724 aaKnown RBP7.25□□□□□ -1.25
SRSF4-207ENST00000622143 RAB15P59190 212 aa7.25□□□□□ -1.25
SRSF4-207ENST00000622143 SLC15A2Q16348 729 aa7.25□□□□□ -1.25
SRSF4-207ENST00000622143 TXNRD1Q16881 649 aa7.25□□□□□ -1.25
SRSF4-207ENST00000622143 XP32Q5T750 250 aa7.25□□□□□ -1.25
SRSF4-207ENST00000622143 NLGN2Q8NFZ4 835 aa7.25□□□□□ -1.25
SRSF4-207ENST00000622143 ZFP42Q96MM3 310 aa7.25□□□□□ -1.25
SRSF4-207ENST00000622143 C1orf115Q9H7X2 142 aa7.25□□□□□ -1.25
SRSF4-207ENST00000622143 PCDHB9Q9Y5E1 797 aa7.25□□□□□ -1.25
SRSF4-207ENST00000622143 ATP10DQ9P241 1426 aa7.25□□□□□ -1.25
SRSF4-207ENST00000622143 DHX57Q6P158 1386 aaKnown RBP7.24□□□□□ -1.25
SRSF4-207ENST00000622143 RGPD3A6NKT7 1758 aaPredicted RBP7.24□□□□□ -1.25
SRSF4-207ENST00000622143 RGPD4Q7Z3J3 1758 aa7.24□□□□□ -1.25
SRSF4-207ENST00000622143 TULP4Q9NRJ4 1543 aa7.24□□□□□ -1.25
SRSF4-207ENST00000622143 PLSCR1O15162 318 aa7.24□□□□□ -1.25
SRSF4-207ENST00000622143 LORP23490 312 aaPredicted RBP7.24□□□□□ -1.25
SRSF4-207ENST00000622143 CCDC116Q8IYX3 515 aa7.24□□□□□ -1.25
SRSF4-207ENST00000622143 MEIOBQ8N635 442 aa7.24□□□□□ -1.25
SRSF4-207ENST00000622143 ADAMTS19Q8TE59 1207 aa7.24□□□□□ -1.25
SRSF4-207ENST00000622143 GLMNQ92990 594 aa7.24□□□□□ -1.25
SRSF4-207ENST00000622143 KCTD15Q96SI1 283 aaPredicted RBP7.24□□□□□ -1.25
SRSF4-207ENST00000622143 WWC3Q9ULE0 1092 aa7.24□□□□□ -1.25
SRSF4-207ENST00000622143 ANKRD30BQ9BXX2 1392 aa7.23□□□□□ -1.25
SRSF4-207ENST00000622143 LMO7Q8WWI1 1683 aa7.23□□□□□ -1.25
SRSF4-207ENST00000622143 YBX3P16989 372 aaKnown RBP eCLIP7.23□□□□□ -1.25
SRSF4-207ENST00000622143 EIF4G2P78344 907 aaKnown RBP eCLIP7.23□□□□□ -1.25
SRSF4-207ENST00000622143 DDB1Q16531 1140 aa7.23□□□□□ -1.25
SRSF4-207ENST00000622143 ZNF827Q17R98 1081 aa7.23□□□□□ -1.25
SRSF4-207ENST00000622143 INTS6LQ5JSJ4 861 aaKnown RBP7.23□□□□□ -1.25
SRSF4-207ENST00000622143 MARCH10Q8NA82 808 aaPredicted RBP7.23□□□□□ -1.25
SRSF4-207ENST00000622143 ACSBG1Q96GR2 724 aa7.23□□□□□ -1.25
SRSF4-207ENST00000622143 CDV3Q9UKY7 258 aaKnown RBP7.23□□□□□ -1.25
SRSF4-207ENST00000622143 SPATA31E1Q6ZUB1 1445 aa7.23□□□□□ -1.25
SRSF4-207ENST00000622143 COL5A2P05997 1499 aaPredicted RBP7.23□□□□□ -1.25
SRSF4-207ENST00000622143 ATP7BP35670 1465 aa7.23□□□□□ -1.25
SRSF4-207ENST00000622143 HSPA6P17066 643 aa7.22□□□□□ -1.25
SRSF4-207ENST00000622143 PPP1R26Q5T8A7 1209 aaPredicted RBP7.22□□□□□ -1.25
SRSF4-207ENST00000622143 PURBQ96QR8 312 aaKnown RBP7.22□□□□□ -1.25
SRSF4-207ENST00000622143 C14orf93Q9H972 538 aaKnown RBP7.22□□□□□ -1.25
SRSF4-207ENST00000622143 EMILIN1Q9Y6C2 1016 aa7.22□□□□□ -1.25
SRSF4-207ENST00000622143 TOPAZ1Q8N9V7 1692 aa7.22□□□□□ -1.25
SRSF4-207ENST00000622143 AKAP12Q02952 1782 aa7.21□□□□□ -1.25
SRSF4-207ENST00000622143 ESPNB1AK53 854 aa7.21□□□□□ -1.26
SRSF4-207ENST00000622143 WASLO00401 505 aaPredicted RBP7.21□□□□□ -1.26
SRSF4-207ENST00000622143 SOX11P35716 441 aa7.21□□□□□ -1.26
SRSF4-207ENST00000622143 SEMA3FQ13275 785 aa7.21□□□□□ -1.26
SRSF4-207ENST00000622143 NBPF20Q3BBV1 942 aa7.21□□□□□ -1.26
SRSF4-207ENST00000622143 HDGFL1Q5TGJ6 251 aa7.21□□□□□ -1.26
SRSF4-207ENST00000622143 TOM1L2Q6ZVM7 507 aa7.21□□□□□ -1.26
SRSF4-207ENST00000622143 SIRT1Q96EB6 747 aa7.21□□□□□ -1.26
SRSF4-207ENST00000622143 CALR3Q96L12 384 aaKnown RBP7.21□□□□□ -1.26
SRSF4-207ENST00000622143 CRB1P82279 1406 aa7.2□□□□□ -1.26
SRSF4-207ENST00000622143 TERTO14746 1132 aaKnown RBP7.2□□□□□ -1.26
SRSF4-207ENST00000622143 Q6ZVU0 165 aa7.2□□□□□ -1.26
SRSF4-207ENST00000622143 KRTAP1-3Q8IUG1 177 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms