RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 DBNLQ9UJU6 430 aaKnown RBP3.89□□□□□ -1.79
U1.39-201ENST00000621562 LIMCH1Q9UPQ0 1083 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 ZKSCAN5Q9Y2L8 839 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 CACNA1SQ13698 1873 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 FOCADQ5VW36 1801 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 DISP2A7MBM2 1401 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 ZBTB7CA1YPR0 619 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 NBPF26B4DH59 902 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 HIP1O00291 1037 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 DTNBO60941 627 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 TAF5LO75529 589 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 ATP5JP18859 108 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 NCLP19338 710 aaKnown RBP3.88□□□□□ -1.79
U1.39-201ENST00000621562 RPS6KB1P23443 525 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 GJB2P29033 226 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 TERF1P54274 439 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 UBE2HP62256 183 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 UVSSAQ2YD98 709 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 TNNI3KQ59H18 835 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 NBPF14Q5TI25 921 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 NBPF10Q6P3W6 841 aaKnown RBP3.88□□□□□ -1.79
U1.39-201ENST00000621562 LARP1Q6PKG0 1096 aaKnown RBP3.88□□□□□ -1.79
U1.39-201ENST00000621562 RBM43Q6ZSC3 357 aaKnown RBP3.88□□□□□ -1.79
U1.39-201ENST00000621562 STOX1Q6ZVD7 989 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 CDC37L1Q7L3B6 337 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 ATG9AQ7Z3C6 839 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 TTC6Q86TZ1 520 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 CLASRPQ8N2M8 674 aaKnown RBP3.88□□□□□ -1.79
U1.39-201ENST00000621562 NBPF15Q8N660 670 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 RUFY2Q8WXA3 655 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 DDX17Q92841 729 aaKnown RBP3.88□□□□□ -1.79
U1.39-201ENST00000621562 EDC3Q96F86 508 aaKnown RBP3.88□□□□□ -1.79
U1.39-201ENST00000621562 ZSCAN31Q96LW9 406 aaPredicted RBP3.88□□□□□ -1.79
U1.39-201ENST00000621562 MYD88Q99836 296 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 LARP6Q9BRS8 491 aaKnown RBP3.88□□□□□ -1.79
U1.39-201ENST00000621562 CCDC8Q9H0W5 538 aaPredicted RBP3.88□□□□□ -1.79
U1.39-201ENST00000621562 PDRG1Q9NUG6 133 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 C9orf78Q9NZ63 289 aaPredicted RBP3.88□□□□□ -1.79
U1.39-201ENST00000621562 TPCN1Q9ULQ1 816 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 FPGT-TNNI3KV9GXZ4 949 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 ELP1O95163 1332 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 SPATA31A3Q5VYP0 1347 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 SH3TC1Q8TE82 1336 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 SALL1Q9NSC2 1324 aa3.88□□□□□ -1.79
U1.39-201ENST00000621562 ATRNO75882 1429 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 FOXP2O15409 715 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 DDX58O95786 925 aaKnown RBP3.87□□□□□ -1.79
U1.39-201ENST00000621562 CHGBP05060 677 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 TPM2P07951 284 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 IFIT2P09913 472 aaKnown RBP3.87□□□□□ -1.79
U1.39-201ENST00000621562 PRKCSHP14314 528 aaPredicted RBP3.87□□□□□ -1.79
U1.39-201ENST00000621562 TATP17735 454 aaPredicted RBP3.87□□□□□ -1.79
U1.39-201ENST00000621562 MCM5P33992 734 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 PIP4K2AP48426 406 aaPredicted RBP3.87□□□□□ -1.79
U1.39-201ENST00000621562 ZC3H6P61129 1189 aaKnown RBP3.87□□□□□ -1.79
U1.39-201ENST00000621562 FOXO4P98177 505 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 DNM1Q05193 864 aaKnown RBP3.87□□□□□ -1.79
U1.39-201ENST00000621562 TFCP2Q12800 502 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 RESTQ13127 1097 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 G3BP1Q13283 466 aaKnown RBP eCLIP3.87□□□□□ -1.79
U1.39-201ENST00000621562 OS9Q13438 667 aaPredicted RBP3.87□□□□□ -1.79
U1.39-201ENST00000621562 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.87□□□□□ -1.79
U1.39-201ENST00000621562 KIAA1211Q6ZU35 1233 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 COPS6Q7L5N1 327 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 PROSER2Q86WR7 435 aaPredicted RBP3.87□□□□□ -1.79
U1.39-201ENST00000621562 IFNL2Q8IZJ0 200 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 NECAB1Q8N987 351 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 FAM184AQ8NB25 1140 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 RNF214Q8ND24 703 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 DDX54Q8TDD1 881 aaKnown RBP3.87□□□□□ -1.79
U1.39-201ENST00000621562 GTF3C6Q969F1 213 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 SYAP1Q96A49 352 aaPredicted RBP3.87□□□□□ -1.79
U1.39-201ENST00000621562 TRIM44Q96DX7 344 aaPredicted RBP3.87□□□□□ -1.79
U1.39-201ENST00000621562 GPATCH3Q96I76 525 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 NAP1L5Q96NT1 182 aaPredicted RBP3.87□□□□□ -1.79
U1.39-201ENST00000621562 DBNDD2Q9BQY9 259 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 AGXT2Q9BYV1 514 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 SIL1Q9H173 461 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 C19orf44Q9H6X5 657 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 HMG20BQ9P0W2 317 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 CCDC39Q9UFE4 941 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 SMC3Q9UQE7 1217 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.87□□□□□ -1.79
U1.39-201ENST00000621562 USP16Q9Y5T5 823 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 CYP46A1Q9Y6A2 500 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.87□□□□□ -1.79
U1.39-201ENST00000621562 NAV1Q8NEY1 1877 aa3.87□□□□□ -1.79
U1.39-201ENST00000621562 AHDC1Q5TGY3 1603 aaPredicted RBP3.87□□□□□ -1.79
U1.39-201ENST00000621562 DDX60LQ5H9U9 1706 aaKnown RBP3.87□□□□□ -1.79
U1.39-201ENST00000621562 MYH10P35580 1976 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 H7C1W4 665 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 FIBPO43427 364 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 JAK2O60674 1132 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 SNRPA1P09661 255 aaKnown RBP3.86□□□□□ -1.79
U1.39-201ENST00000621562 HCLS1P14317 486 aaPredicted RBP3.86□□□□□ -1.79
U1.39-201ENST00000621562 MYL6BP14649 208 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 LIG1P18858 919 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 AIMP1Q12904 312 aaKnown RBP3.86□□□□□ -1.79
U1.39-201ENST00000621562 NKX1-1Q15270 411 aaPredicted RBP3.86□□□□□ -1.79
U1.39-201ENST00000621562 FOXD4L6Q3SYB3 417 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms