RNA–Protein interactions for RNA: ENST00000619987.4

MESD-207, Transcript of mesoderm development LRP chaperone, humanhuman

TSL 1 (best)

Gene MESD, Length 3,978 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MESD-207ENST00000619987 HOXB7P09629 217 aa12.96□□□□□ -0.33
MESD-207ENST00000619987 USP5P45974 858 aa12.96□□□□□ -0.33
MESD-207ENST00000619987 BRF1Q92994 677 aa12.96□□□□□ -0.33
MESD-207ENST00000619987 SLIT1O75093 1534 aa12.96□□□□□ -0.34
MESD-207ENST00000619987 KIAA2012Q0VF49 1180 aa12.96□□□□□ -0.34
MESD-207ENST00000619987 SMIM5Q71RC9 77 aa12.96□□□□□ -0.34
MESD-207ENST00000619987 NRDCO43847 1150 aa12.95□□□□□ -0.34
MESD-207ENST00000619987 ME1P48163 572 aa12.95□□□□□ -0.34
MESD-207ENST00000619987 TNPO1Q92973 898 aaKnown RBP12.95□□□□□ -0.34
MESD-207ENST00000619987 CARD10Q9BWT7 1032 aa12.95□□□□□ -0.34
MESD-207ENST00000619987 ANO8Q9HCE9 1232 aaPredicted RBP12.95□□□□□ -0.34
MESD-207ENST00000619987 ZGPATQ8N5A5 531 aaKnown RBP12.95□□□□□ -0.34
MESD-207ENST00000619987 TMX3Q96JJ7 454 aa12.95□□□□□ -0.34
MESD-207ENST00000619987 NRXN3Q9Y4C0 1643 aa12.95□□□□□ -0.34
MESD-207ENST00000619987 MICU3Q86XE3 530 aa12.95□□□□□ -0.34
MESD-207ENST00000619987 CPS1P31327 1500 aa12.94□□□□□ -0.34
MESD-207ENST00000619987 GSPT1P15170 499 aaKnown RBP12.94□□□□□ -0.34
MESD-207ENST00000619987 STK38Q15208 465 aa12.94□□□□□ -0.34
MESD-207ENST00000619987 PAG1Q9NWQ8 432 aa12.94□□□□□ -0.34
MESD-207ENST00000619987 SH3TC1Q8TE82 1336 aa12.94□□□□□ -0.34
MESD-207ENST00000619987 WDR33Q9C0J8 1336 aaKnown RBP12.94□□□□□ -0.34
MESD-207ENST00000619987 KRT32Q14532 448 aa12.94□□□□□ -0.34
MESD-207ENST00000619987 ANKRD1Q15327 319 aa12.94□□□□□ -0.34
MESD-207ENST00000619987 PIGBQ92521 554 aa12.94□□□□□ -0.34
MESD-207ENST00000619987 EAF2Q96CJ1 260 aaPredicted RBP12.94□□□□□ -0.34
MESD-207ENST00000619987 LIMCH1Q9UPQ0 1083 aa12.94□□□□□ -0.34
MESD-207ENST00000619987 TPTE2Q6XPS3 522 aa12.94□□□□□ -0.34
MESD-207ENST00000619987 BABAM1Q9NWV8 329 aa12.94□□□□□ -0.34
MESD-207ENST00000619987 ERVV-2B6SEH9 535 aa12.93□□□□□ -0.34
MESD-207ENST00000619987 CCDC34Q96HJ3 373 aa12.93□□□□□ -0.34
MESD-207ENST00000619987 CWC22Q9HCG8 908 aaKnown RBP12.93□□□□□ -0.34
MESD-207ENST00000619987 CCDC87Q9NVE4 849 aa12.93□□□□□ -0.34
MESD-207ENST00000619987 CDK12Q9NYV4 1490 aaPredicted RBP12.93□□□□□ -0.34
MESD-207ENST00000619987 EYA2O00167 538 aa12.93□□□□□ -0.34
MESD-207ENST00000619987 POLR3DP05423 398 aaPredicted RBP12.93□□□□□ -0.34
MESD-207ENST00000619987 RIMBP2O15034 1052 aa12.93□□□□□ -0.34
MESD-207ENST00000619987 LRRC24Q50LG9 513 aa12.93□□□□□ -0.34
MESD-207ENST00000619987 CCDC191Q8NCU4 936 aa12.93□□□□□ -0.34
MESD-207ENST00000619987 LOC102724428A0A0B4J2F2 783 aa12.92□□□□□ -0.34
MESD-207ENST00000619987 IFIT3O14879 490 aaKnown RBP12.92□□□□□ -0.34
MESD-207ENST00000619987 SLC3A2P08195 630 aaKnown RBP12.92□□□□□ -0.34
MESD-207ENST00000619987 CYP7A1P22680 504 aa12.92□□□□□ -0.34
MESD-207ENST00000619987 SIK1P57059 783 aa12.92□□□□□ -0.34
MESD-207ENST00000619987 TNNI3KQ59H18 835 aa12.92□□□□□ -0.34
MESD-207ENST00000619987 NEK1Q96PY6 1258 aa12.92□□□□□ -0.34
MESD-207ENST00000619987 PUS3Q9BZE2 481 aaKnown RBP12.92□□□□□ -0.34
MESD-207ENST00000619987 MKNK2Q9HBH9 465 aa12.92□□□□□ -0.34
MESD-207ENST00000619987 FPGT-TNNI3KV9GXZ4 949 aa12.92□□□□□ -0.34
MESD-207ENST00000619987 TPD52L1Q16890 204 aaPredicted RBP12.92□□□□□ -0.34
MESD-207ENST00000619987 UNC5CLQ8IV45 518 aa12.92□□□□□ -0.34
MESD-207ENST00000619987 SYNE4Q8N205 404 aa12.92□□□□□ -0.34
MESD-207ENST00000619987 CPSF1Q10570 1443 aaKnown RBP12.92□□□□□ -0.34
MESD-207ENST00000619987 GOLGA8BA8MQT2 603 aa12.92□□□□□ -0.34
MESD-207ENST00000619987 SASS6Q6UVJ0 657 aa12.92□□□□□ -0.34
MESD-207ENST00000619987 MPHOSPH10O00566 681 aaKnown RBP12.91□□□□□ -0.34
MESD-207ENST00000619987 RXRAP19793 462 aa12.91□□□□□ -0.34
MESD-207ENST00000619987 CAMK4Q16566 473 aa12.91□□□□□ -0.34
MESD-207ENST00000619987 TRAPPC3LQ5T215 181 aa12.91□□□□□ -0.34
MESD-207ENST00000619987 TRIM22Q8IYM9 498 aa12.91□□□□□ -0.34
MESD-207ENST00000619987 CTDP1Q9Y5B0 961 aaPredicted RBP12.91□□□□□ -0.34
MESD-207ENST00000619987 KRT85P78386 507 aa12.91□□□□□ -0.34
MESD-207ENST00000619987 TCIRG1Q13488 830 aa12.91□□□□□ -0.34
MESD-207ENST00000619987 USP26Q9BXU7 913 aa12.91□□□□□ -0.34
MESD-207ENST00000619987 TLR7Q9NYK1 1049 aaKnown RBP12.91□□□□□ -0.34
MESD-207ENST00000619987 TECPR2O15040 1411 aa12.91□□□□□ -0.34
MESD-207ENST00000619987 NASPP49321 788 aaPredicted RBP12.9□□□□□ -0.34
MESD-207ENST00000619987 MSL1Q68DK7 614 aa12.9□□□□□ -0.34
MESD-207ENST00000619987 SEC62Q99442 399 aaKnown RBP12.9□□□□□ -0.34
MESD-207ENST00000619987 MED14O60244 1454 aa12.9□□□□□ -0.34
MESD-207ENST00000619987 GJB2P29033 226 aa12.9□□□□□ -0.34
MESD-207ENST00000619987 MCMDC2Q4G0Z9 681 aa12.9□□□□□ -0.34
MESD-207ENST00000619987 SNAP23O00161 211 aa12.9□□□□□ -0.34
MESD-207ENST00000619987 SSH3Q8TE77 659 aa12.9□□□□□ -0.34
MESD-207ENST00000619987 SPATA32Q96LK8 384 aa12.9□□□□□ -0.34
MESD-207ENST00000619987 DLC1Q96QB1 1528 aa12.9□□□□□ -0.34
MESD-207ENST00000619987 ZSCAN31Q96LW9 406 aaPredicted RBP12.89□□□□□ -0.35
MESD-207ENST00000619987 PNPLA6Q8IY17 1366 aa12.89□□□□□ -0.35
MESD-207ENST00000619987 SYCE3A1L190 88 aa12.89□□□□□ -0.35
MESD-207ENST00000619987 KCNQ2O43526 872 aa12.89□□□□□ -0.35
MESD-207ENST00000619987 KINO60870 393 aaKnown RBP12.89□□□□□ -0.35
MESD-207ENST00000619987 MAGEB6Q8N7X4 407 aa12.89□□□□□ -0.35
MESD-207ENST00000619987 XAGE2Q96GT9 111 aa12.89□□□□□ -0.35
MESD-207ENST00000619987 TRIM37O94972 964 aa12.89□□□□□ -0.35
MESD-207ENST00000619987 XBP1P17861 261 aa12.89□□□□□ -0.35
MESD-207ENST00000619987 TPM4P67936 248 aa12.89□□□□□ -0.35
MESD-207ENST00000619987 QTRT2Q9H974 415 aaKnown RBP12.89□□□□□ -0.35
MESD-207ENST00000619987 STX8Q9UNK0 236 aa12.88□□□□□ -0.35
MESD-207ENST00000619987 SLC4A4Q9Y6R1 1079 aa12.88□□□□□ -0.35
MESD-207ENST00000619987 CRKLP46109 303 aaKnown RBP12.88□□□□□ -0.35
MESD-207ENST00000619987 AK2P54819 239 aa12.88□□□□□ -0.35
MESD-207ENST00000619987 ZKSCAN3Q9BRR0 538 aa12.88□□□□□ -0.35
MESD-207ENST00000619987 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.88□□□□□ -0.351e-7■□□□□ 9.8
MESD-207ENST00000619987 C1orf167Q5SNV9 1468 aa12.88□□□□□ -0.35
MESD-207ENST00000619987 CNBD1Q8NA66 436 aa12.88□□□□□ -0.35
MESD-207ENST00000619987 VAT1LQ9HCJ6 419 aa12.88□□□□□ -0.35
MESD-207ENST00000619987 APBA3O96018 575 aa12.87□□□□□ -0.35
MESD-207ENST00000619987 TMEM67Q5HYA8 995 aa12.87□□□□□ -0.35
MESD-207ENST00000619987 CREB3L3Q68CJ9 461 aa12.87□□□□□ -0.35
MESD-207ENST00000619987 CDCA7Q9BWT1 371 aaPredicted RBP12.87□□□□□ -0.35
MESD-207ENST00000619987 GREM2Q9H772 168 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms