RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 EPB41L2O43491 1005 aaKnown RBP16.19■□□□□ 0.18
CNOT3-210ENST00000618939 ZFYP08048 801 aaPredicted RBP16.19■□□□□ 0.18
CNOT3-210ENST00000618939 PDCL2Q8N4E4 241 aa16.19■□□□□ 0.18
CNOT3-210ENST00000618939 PAG1Q9NWQ8 432 aa16.19■□□□□ 0.18
CNOT3-210ENST00000618939 PPFIBP1Q86W92 1011 aa16.19■□□□□ 0.18
CNOT3-210ENST00000618939 GOLGA8AA7E2F4 631 aa16.19■□□□□ 0.18
CNOT3-210ENST00000618939 BRD1O95696 1058 aa16.19■□□□□ 0.18
CNOT3-210ENST00000618939 ANO6Q4KMQ2 910 aa16.19■□□□□ 0.18
CNOT3-210ENST00000618939 C16orf45Q96MC5 204 aaPredicted RBP16.19■□□□□ 0.18
CNOT3-210ENST00000618939 ORAI2Q96SN7 254 aa16.19■□□□□ 0.18
CNOT3-210ENST00000618939 PALD1Q9ULE6 856 aa16.19■□□□□ 0.18
CNOT3-210ENST00000618939 SLC12A7Q9Y666 1083 aa16.19■□□□□ 0.18
CNOT3-210ENST00000618939 SETBP1Q9Y6X0 1596 aa16.19■□□□□ 0.18
CNOT3-210ENST00000618939 CCDC196A0A1B0GTZ2 297 aa16.18■□□□□ 0.18
CNOT3-210ENST00000618939 MINDY4BA8MYZ0 360 aa16.18■□□□□ 0.18
CNOT3-210ENST00000618939 IFIT3O14879 490 aaKnown RBP16.18■□□□□ 0.18
CNOT3-210ENST00000618939 SLC5A1P13866 664 aa16.18■□□□□ 0.18
CNOT3-210ENST00000618939 FAM177A1Q8N128 213 aaPredicted RBP16.18■□□□□ 0.18
CNOT3-210ENST00000618939 CCDC82Q8N4S0 544 aa16.18■□□□□ 0.18
CNOT3-210ENST00000618939 TRIM34Q9BYJ4 488 aa16.18■□□□□ 0.18
CNOT3-210ENST00000618939 PDCL3Q9H2J4 239 aa16.18■□□□□ 0.18
CNOT3-210ENST00000618939 TTC12Q9H892 705 aaPredicted RBP16.18■□□□□ 0.18
CNOT3-210ENST00000618939 KLF18A0A0U1RQI7 1052 aa16.18■□□□□ 0.18
CNOT3-210ENST00000618939 PKP1Q13835 747 aa16.18■□□□□ 0.18
CNOT3-210ENST00000618939 TTF1Q15361 905 aaPredicted RBP16.18■□□□□ 0.18
CNOT3-210ENST00000618939 KLHDC4Q8TBB5 520 aa16.18■□□□□ 0.18
CNOT3-210ENST00000618939 IBTKQ9P2D0 1353 aaPredicted RBP16.18■□□□□ 0.18
CNOT3-210ENST00000618939 TNNT1P13805 278 aa16.18■□□□□ 0.18
CNOT3-210ENST00000618939 SUCLG2Q96I99 432 aa16.18■□□□□ 0.18
CNOT3-210ENST00000618939 FAM227BQ96M60 508 aa16.18■□□□□ 0.18
CNOT3-210ENST00000618939 IGSF1Q8N6C5 1336 aa16.18■□□□□ 0.18
CNOT3-210ENST00000618939 USP6P35125 1406 aa16.18■□□□□ 0.18
CNOT3-210ENST00000618939 TNNT3P45378 269 aaPredicted RBP16.17■□□□□ 0.18
CNOT3-210ENST00000618939 NOLC1Q14978 699 aaKnown RBP eCLIP16.17■□□□□ 0.18
CNOT3-210ENST00000618939 MICU3Q86XE3 530 aa16.17■□□□□ 0.18
CNOT3-210ENST00000618939 OSBPL3Q9H4L5 887 aa16.17■□□□□ 0.18
CNOT3-210ENST00000618939 KIF2AO00139 706 aaPredicted RBP16.17■□□□□ 0.18
CNOT3-210ENST00000618939 BIN1O00499 593 aa16.17■□□□□ 0.18
CNOT3-210ENST00000618939 CEP131Q9UPN4 1083 aa16.17■□□□□ 0.18
CNOT3-210ENST00000618939 NEMFO60524 1076 aa16.17■□□□□ 0.18
CNOT3-210ENST00000618939 OFD1O75665 1012 aa16.17■□□□□ 0.18
CNOT3-210ENST00000618939 SSH2Q76I76 1423 aa16.17■□□□□ 0.18
CNOT3-210ENST00000618939 KCNQ3O43525 872 aa16.17■□□□□ 0.18
CNOT3-210ENST00000618939 IARSP41252 1262 aaKnown RBP16.17■□□□□ 0.18
CNOT3-210ENST00000618939 METTL22Q9BUU2 404 aaPredicted RBP16.17■□□□□ 0.18
CNOT3-210ENST00000618939 QRICH2Q9H0J4 1663 aa16.16■□□□□ 0.18
CNOT3-210ENST00000618939 TYRO3Q06418 890 aa16.16■□□□□ 0.18
CNOT3-210ENST00000618939 ATP2B3Q16720 1220 aa16.16■□□□□ 0.18
CNOT3-210ENST00000618939 DYNC1I1O14576 645 aa16.16■□□□□ 0.18
CNOT3-210ENST00000618939 SLC27A2O14975 620 aa16.16■□□□□ 0.18
CNOT3-210ENST00000618939 PRIMPOLQ96LW4 560 aa16.16■□□□□ 0.18
CNOT3-210ENST00000618939 TMEM63CQ9P1W3 806 aa16.16■□□□□ 0.18
CNOT3-210ENST00000618939 METAP2P50579 478 aaKnown RBP eCLIP16.16■□□□□ 0.181e-6■□□□□ 10.5
CNOT3-210ENST00000618939 MAGEC2Q9UBF1 373 aaPredicted RBP16.15■□□□□ 0.18
CNOT3-210ENST00000618939 TMEM67Q5HYA8 995 aa16.15■□□□□ 0.18
CNOT3-210ENST00000618939 BICDL1Q6ZP65 573 aa16.15■□□□□ 0.18
CNOT3-210ENST00000618939 DHX32Q7L7V1 743 aaKnown RBP16.15■□□□□ 0.18
CNOT3-210ENST00000618939 KIF18AQ8NI77 898 aa16.15■□□□□ 0.18
CNOT3-210ENST00000618939 LMTK2Q8IWU2 1503 aa16.15■□□□□ 0.18
CNOT3-210ENST00000618939 NUTM2BA6NNL0 878 aaPredicted RBP16.15■□□□□ 0.18
CNOT3-210ENST00000618939 NUTM2EB1AL46 878 aaPredicted RBP16.15■□□□□ 0.18
CNOT3-210ENST00000618939 NUTM2AQ8IVF1 878 aaPredicted RBP16.15■□□□□ 0.18
CNOT3-210ENST00000618939 CCDC144CPQ8IYA2 1237 aa16.15■□□□□ 0.18
CNOT3-210ENST00000618939 DNAJC25Q9H1X3 360 aa16.15■□□□□ 0.18
CNOT3-210ENST00000618939 PLEKHG1Q9ULL1 1385 aa16.15■□□□□ 0.18
CNOT3-210ENST00000618939 RPS6KB1P23443 525 aa16.15■□□□□ 0.18
CNOT3-210ENST00000618939 SSRP1Q08945 709 aaKnown RBP16.15■□□□□ 0.18
CNOT3-210ENST00000618939 CCDC186Q7Z3E2 898 aa16.15■□□□□ 0.18
CNOT3-210ENST00000618939 GAS2L3Q86XJ1 694 aa16.15■□□□□ 0.18
CNOT3-210ENST00000618939 RNF41Q9H4P4 317 aaPredicted RBP16.15■□□□□ 0.18
CNOT3-210ENST00000618939 PNPLA6Q8IY17 1366 aa16.14■□□□□ 0.17
CNOT3-210ENST00000618939 FSD2A1L4K1 749 aa16.14■□□□□ 0.17
CNOT3-210ENST00000618939 TNNI3KQ59H18 835 aa16.14■□□□□ 0.17
CNOT3-210ENST00000618939 CNNM3Q8NE01 707 aa16.14■□□□□ 0.17
CNOT3-210ENST00000618939 STAP2Q9UGK3 403 aa16.14■□□□□ 0.17
CNOT3-210ENST00000618939 ZNF652Q9Y2D9 606 aa16.14■□□□□ 0.17
CNOT3-210ENST00000618939 FPGT-TNNI3KV9GXZ4 949 aa16.14■□□□□ 0.17
CNOT3-210ENST00000618939 ABCA9Q8IUA7 1624 aa16.14■□□□□ 0.17
CNOT3-210ENST00000618939 DBNDD2Q9BQY9 259 aa16.14■□□□□ 0.17
CNOT3-210ENST00000618939 TRMT1Q9NXH9 659 aaKnown RBP16.14■□□□□ 0.17
CNOT3-210ENST00000618939 GSDMDP57764 484 aa16.14■□□□□ 0.17
CNOT3-210ENST00000618939 APOBRQ0VD83 1088 aa16.14■□□□□ 0.17
CNOT3-210ENST00000618939 BEND3Q5T5X7 828 aa16.14■□□□□ 0.17
CNOT3-210ENST00000618939 PIBF1Q8WXW3 757 aa16.14■□□□□ 0.17
CNOT3-210ENST00000618939 RNF113AO15541 343 aaKnown RBP16.13■□□□□ 0.17
CNOT3-210ENST00000618939 GADD45BO75293 160 aaPredicted RBP16.13■□□□□ 0.17
CNOT3-210ENST00000618939 GIGYF1O75420 1035 aaPredicted RBP16.13■□□□□ 0.17
CNOT3-210ENST00000618939 HSP90B2PQ58FF3 399 aa16.13■□□□□ 0.17
CNOT3-210ENST00000618939 EXOC5O00471 708 aa16.13■□□□□ 0.17
CNOT3-210ENST00000618939 MRPS27Q92552 414 aaKnown RBP16.13■□□□□ 0.17
CNOT3-210ENST00000618939 TULP4Q9NRJ4 1543 aa16.13■□□□□ 0.17
CNOT3-210ENST00000618939 GCKRQ14397 625 aa16.13■□□□□ 0.17
CNOT3-210ENST00000618939 CAVIN4Q5BKX8 364 aa16.13■□□□□ 0.17
CNOT3-210ENST00000618939 CHST3Q7LGC8 479 aa16.13■□□□□ 0.17
CNOT3-210ENST00000618939 ACBD3Q9H3P7 528 aa16.13■□□□□ 0.17
CNOT3-210ENST00000618939 PTPDC1A2A3K4 754 aa16.13■□□□□ 0.17
CNOT3-210ENST00000618939 STIM1Q13586 685 aa16.13■□□□□ 0.17
CNOT3-210ENST00000618939 KCNG4Q8TDN1 519 aa16.13■□□□□ 0.17
CNOT3-210ENST00000618939 CPSF1Q10570 1443 aaKnown RBP16.12■□□□□ 0.17
CNOT3-210ENST00000618939 CEP152O94986 1710 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms