RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 ERVV-1B6SEH8 477 aa5.79□□□□□ -1.48
SYCP1-210ENST00000618516 GRM8O00222 908 aa5.79□□□□□ -1.48
SYCP1-210ENST00000618516 UFL1O94874 794 aa5.79□□□□□ -1.48
SYCP1-210ENST00000618516 HTRA3P83110 453 aa5.79□□□□□ -1.48
SYCP1-210ENST00000618516 ZKSCAN2Q63HK3 967 aa5.79□□□□□ -1.48
SYCP1-210ENST00000618516 B4GALNT3Q6L9W6 998 aa5.79□□□□□ -1.48
SYCP1-210ENST00000618516 DPP8Q6V1X1 898 aaPredicted RBP5.79□□□□□ -1.48
SYCP1-210ENST00000618516 MASTLQ96GX5 879 aa5.79□□□□□ -1.48
SYCP1-210ENST00000618516 ZBTB12Q9Y330 459 aaPredicted RBP5.79□□□□□ -1.48
SYCP1-210ENST00000618516 CD2APQ9Y5K6 639 aa5.79□□□□□ -1.48
SYCP1-210ENST00000618516 IL16Q14005 1332 aa5.79□□□□□ -1.48
SYCP1-210ENST00000618516 PPEF1O14829 653 aaPredicted RBP5.79□□□□□ -1.48
SYCP1-210ENST00000618516 SRGAP3O43295 1099 aa5.79□□□□□ -1.48
SYCP1-210ENST00000618516 DDNO94850 711 aaPredicted RBP5.79□□□□□ -1.48
SYCP1-210ENST00000618516 KLRK1P26718 216 aa5.79□□□□□ -1.48
SYCP1-210ENST00000618516 CHAF1AQ13111 956 aaPredicted RBP5.79□□□□□ -1.48
SYCP1-210ENST00000618516 IFIT5Q13325 482 aaKnown RBP5.79□□□□□ -1.48
SYCP1-210ENST00000618516 PARP10Q53GL7 1025 aa5.79□□□□□ -1.48
SYCP1-210ENST00000618516 BEND3Q5T5X7 828 aa5.79□□□□□ -1.48
SYCP1-210ENST00000618516 ATF7IPQ6VMQ6 1270 aa5.79□□□□□ -1.48
SYCP1-210ENST00000618516 ZBTB38Q8NAP3 1195 aaPredicted RBP5.79□□□□□ -1.48
SYCP1-210ENST00000618516 LINS1Q8NG48 757 aa5.79□□□□□ -1.48
SYCP1-210ENST00000618516 NEUROD6Q96NK8 337 aa5.79□□□□□ -1.48
SYCP1-210ENST00000618516 NMRK2Q9NPI5 230 aa5.79□□□□□ -1.48
SYCP1-210ENST00000618516 CLEC11AQ9Y240 323 aa5.79□□□□□ -1.48
SYCP1-210ENST00000618516 ABCC4O15439 1325 aa5.78□□□□□ -1.48
SYCP1-210ENST00000618516 LRRC24Q50LG9 513 aa5.78□□□□□ -1.48
SYCP1-210ENST00000618516 DLK2Q6UY11 383 aa5.78□□□□□ -1.48
SYCP1-210ENST00000618516 ANKRD18AQ8IVF6 992 aa5.78□□□□□ -1.48
SYCP1-210ENST00000618516 DZIP1LQ8IYY4 767 aaKnown RBP5.78□□□□□ -1.48
SYCP1-210ENST00000618516 TAOK3Q9H2K8 898 aa5.78□□□□□ -1.48
SYCP1-210ENST00000618516 ZNF408Q9H9D4 720 aa5.78□□□□□ -1.48
SYCP1-210ENST00000618516 GPBP1L1Q9HC44 474 aaPredicted RBP5.78□□□□□ -1.48
SYCP1-210ENST00000618516 EXOC6BQ9Y2D4 811 aa5.78□□□□□ -1.48
SYCP1-210ENST00000618516 RNF123Q5XPI4 1314 aa5.78□□□□□ -1.48
SYCP1-210ENST00000618516 HOXB7P09629 217 aa5.78□□□□□ -1.48
SYCP1-210ENST00000618516 RPS8P62241 208 aaKnown RBP5.78□□□□□ -1.48
SYCP1-210ENST00000618516 CCDC152Q4G0S7 254 aa5.78□□□□□ -1.48
SYCP1-210ENST00000618516 VPS37DQ86XT2 251 aa5.78□□□□□ -1.48
SYCP1-210ENST00000618516 CCDC191Q8NCU4 936 aa5.78□□□□□ -1.48
SYCP1-210ENST00000618516 RBM17Q96I25 401 aaKnown RBP5.78□□□□□ -1.48
SYCP1-210ENST00000618516 IL1RAPL2Q9NP60 686 aa5.78□□□□□ -1.48
SYCP1-210ENST00000618516 NDUFB9Q9Y6M9 179 aa5.78□□□□□ -1.48
SYCP1-210ENST00000618516 IPO8O15397 1037 aaKnown RBP5.77□□□□□ -1.49
SYCP1-210ENST00000618516 NPR1P16066 1061 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 IGHMBP2P38935 993 aaKnown RBP5.77□□□□□ -1.49
SYCP1-210ENST00000618516 CTSWP56202 376 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 WASHC4Q2M389 1173 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 SKAP1Q86WV1 359 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 MPNDQ8N594 471 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 TTLL11Q8NHH1 800 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 JDP2Q8WYK2 163 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 CNKSR1Q969H4 720 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 ISCA1Q9BUE6 129 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 USP44Q9H0E7 712 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 BABAM1Q9NWV8 329 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 SHTN1A0MZ66 631 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 NFKBIEO00221 500 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 PDE8AO60658 829 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 SLC4A8Q2Y0W8 1093 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 METTL24Q5JXM2 366 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 TSHZ3Q63HK5 1081 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 TXNRD3Q86VQ6 643 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 LY75O60449 1722 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 UBR3Q6ZT12 1888 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 TAF1LQ8IZX4 1826 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 TUBGCP6Q96RT7 1819 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 TJP1Q07157 1748 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 ECM2O94769 699 aaPredicted RBP5.77□□□□□ -1.49
SYCP1-210ENST00000618516 TGFB2P61812 414 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 PRKG1Q13976 671 aa5.77□□□□□ -1.49
SYCP1-210ENST00000618516 API5Q9BZZ5 524 aaKnown RBP5.77□□□□□ -1.49
SYCP1-210ENST00000618516 PXDNLA1KZ92 1463 aa5.76□□□□□ -1.49
SYCP1-210ENST00000618516 TAF1P21675 1872 aa5.76□□□□□ -1.49
SYCP1-210ENST00000618516 PNMA6EA0A0J9YXQ4 647 aa5.76□□□□□ -1.49
SYCP1-210ENST00000618516 ANKRD18BA2A2Z9 1011 aa5.76□□□□□ -1.49
SYCP1-210ENST00000618516 SURF6O75683 361 aaKnown RBP5.76□□□□□ -1.49
SYCP1-210ENST00000618516 POTEIP0CG38 1075 aa5.76□□□□□ -1.49
SYCP1-210ENST00000618516 POTEJP0CG39 1038 aa5.76□□□□□ -1.49
SYCP1-210ENST00000618516 GYG1P46976 350 aa5.76□□□□□ -1.49
SYCP1-210ENST00000618516 PRELPP51888 382 aa5.76□□□□□ -1.49
SYCP1-210ENST00000618516 RBM5P52756 815 aaKnown RBP eCLIP5.76□□□□□ -1.49
SYCP1-210ENST00000618516 GPSM2P81274 684 aa5.76□□□□□ -1.49
SYCP1-210ENST00000618516 PAXIP1Q6ZW49 1069 aaPredicted RBP5.76□□□□□ -1.49
SYCP1-210ENST00000618516 ZNF784Q8NCA9 323 aaPredicted RBP5.76□□□□□ -1.49
SYCP1-210ENST00000618516 CRBNQ96SW2 442 aa5.76□□□□□ -1.49
SYCP1-210ENST00000618516 ZC3H12CQ9C0D7 883 aaKnown RBP5.76□□□□□ -1.49
SYCP1-210ENST00000618516 RRAGCQ9HB90 399 aa5.76□□□□□ -1.49
SYCP1-210ENST00000618516 SNRKQ9NRH2 765 aa5.76□□□□□ -1.49
SYCP1-210ENST00000618516 ERBB4Q15303 1308 aa5.76□□□□□ -1.49
SYCP1-210ENST00000618516 KIF16BQ96L93 1317 aa5.76□□□□□ -1.49
SYCP1-210ENST00000618516 GRIN3BO60391 1043 aa5.76□□□□□ -1.49
SYCP1-210ENST00000618516 PCCAP05165 728 aaPredicted RBP5.76□□□□□ -1.49
SYCP1-210ENST00000618516 HMGB2P26583 209 aaKnown RBP5.76□□□□□ -1.49
SYCP1-210ENST00000618516 ALDH1B1P30837 517 aa5.76□□□□□ -1.49
SYCP1-210ENST00000618516 TIMM10P62072 90 aa5.76□□□□□ -1.49
SYCP1-210ENST00000618516 FMR1Q06787 632 aaKnown RBP eCLIP5.76□□□□□ -1.49
SYCP1-210ENST00000618516 CCDC93Q567U6 631 aa5.76□□□□□ -1.49
SYCP1-210ENST00000618516 GORABQ5T7V8 394 aa5.76□□□□□ -1.49
SYCP1-210ENST00000618516 PRAMEF18Q5VWM3 479 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms