RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 RBM33Q96EV2 1170 aaKnown RBP20.72■□□□□ 0.91
DDX1-207ENST00000617198 TAF5LO75529 589 aa20.71■□□□□ 0.91
DDX1-207ENST00000617198 NEXNQ0ZGT2 675 aa20.71■□□□□ 0.91
DDX1-207ENST00000617198 KRT32Q14532 448 aa20.71■□□□□ 0.91
DDX1-207ENST00000617198 USPL1Q5W0Q7 1092 aa20.71■□□□□ 0.91
DDX1-207ENST00000617198 LEO1Q8WVC0 666 aaPredicted RBP20.71■□□□□ 0.91
DDX1-207ENST00000617198 JARID2Q92833 1246 aaPredicted RBP20.71■□□□□ 0.91
DDX1-207ENST00000617198 TFIP11Q9UBB9 837 aaKnown RBP20.71■□□□□ 0.91
DDX1-207ENST00000617198 KIF3AQ9Y496 699 aa20.71■□□□□ 0.91
DDX1-207ENST00000617198 NEURL1BA8MQ27 555 aa20.71■□□□□ 0.91
DDX1-207ENST00000617198 STK3Q13188 491 aa20.71■□□□□ 0.91
DDX1-207ENST00000617198 CAMTA1Q9Y6Y1 1673 aa20.7■□□□□ 0.9
DDX1-207ENST00000617198 LUZP1Q86V48 1076 aa20.7■□□□□ 0.9
DDX1-207ENST00000617198 CKAP2LQ8IYA6 745 aa20.7■□□□□ 0.9
DDX1-207ENST00000617198 SLIT3O75094 1523 aa20.7■□□□□ 0.9
DDX1-207ENST00000617198 LMTK3Q96Q04 1460 aa20.7■□□□□ 0.9
DDX1-207ENST00000617198 ADAMTS7Q9UKP4 1686 aa20.7■□□□□ 0.9
DDX1-207ENST00000617198 RBM43Q6ZSC3 357 aaKnown RBP20.7■□□□□ 0.9
DDX1-207ENST00000617198 ZNF710Q8N1W2 664 aa20.7■□□□□ 0.9
DDX1-207ENST00000617198 TSC1Q92574 1164 aa20.7■□□□□ 0.9
DDX1-207ENST00000617198 GCKRQ14397 625 aa20.69■□□□□ 0.9
DDX1-207ENST00000617198 ANO6Q4KMQ2 910 aa20.69■□□□□ 0.9
DDX1-207ENST00000617198 ARID3AQ99856 593 aa20.69■□□□□ 0.9
DDX1-207ENST00000617198 CCDC94Q9BW85 323 aaPredicted RBP20.69■□□□□ 0.9
DDX1-207ENST00000617198 CLSTN2Q9H4D0 955 aa20.69■□□□□ 0.9
DDX1-207ENST00000617198 GTF3C6Q969F1 213 aa20.69■□□□□ 0.9
DDX1-207ENST00000617198 EDC3Q96F86 508 aaKnown RBP20.69■□□□□ 0.9
DDX1-207ENST00000617198 CBX8Q9HC52 389 aa20.69■□□□□ 0.9
DDX1-207ENST00000617198 ATP5JP18859 108 aa20.68■□□□□ 0.9
DDX1-207ENST00000617198 CHAF1AQ13111 956 aaPredicted RBP20.68■□□□□ 0.9
DDX1-207ENST00000617198 EPHA10Q5JZY3 1008 aa20.68■□□□□ 0.9
DDX1-207ENST00000617198 NEK1Q96PY6 1258 aa20.67■□□□□ 0.9
DDX1-207ENST00000617198 METTL22Q9BUU2 404 aaPredicted RBP20.67■□□□□ 0.9
DDX1-207ENST00000617198 COPRSQ9NQ92 184 aa20.67■□□□□ 0.9
DDX1-207ENST00000617198 MYL6BP14649 208 aa20.67■□□□□ 0.9
DDX1-207ENST00000617198 PTGS1P23219 599 aa20.67■□□□□ 0.9
DDX1-207ENST00000617198 ZNF790Q6PG37 636 aa20.67■□□□□ 0.9
DDX1-207ENST00000617198 JAK2O60674 1132 aa20.66■□□□□ 0.9
DDX1-207ENST00000617198 XAGE3Q8WTP9 111 aa20.66■□□□□ 0.9
DDX1-207ENST00000617198 MYD88Q99836 296 aa20.66■□□□□ 0.9
DDX1-207ENST00000617198 DBNLQ9UJU6 430 aaKnown RBP20.66■□□□□ 0.9
DDX1-207ENST00000617198 COL15A1P39059 1388 aa20.66■□□□□ 0.9
DDX1-207ENST00000617198 C5P01031 1676 aa20.66■□□□□ 0.9
DDX1-207ENST00000617198 NR1I2O75469 434 aa20.66■□□□□ 0.9
DDX1-207ENST00000617198 BICD2Q8TD16 824 aa20.66■□□□□ 0.9
DDX1-207ENST00000617198 PGBD1Q96JS3 809 aa20.66■□□□□ 0.9
DDX1-207ENST00000617198 RFX7Q2KHR2 1363 aa20.66■□□□□ 0.9
DDX1-207ENST00000617198 RESTQ13127 1097 aa20.65■□□□□ 0.9
DDX1-207ENST00000617198 SLC39A6Q13433 755 aa20.65■□□□□ 0.9
DDX1-207ENST00000617198 TNNI3KQ59H18 835 aa20.65■□□□□ 0.9
DDX1-207ENST00000617198 COPS6Q7L5N1 327 aa20.65■□□□□ 0.9
DDX1-207ENST00000617198 AXIN2Q9Y2T1 843 aa20.65■□□□□ 0.9
DDX1-207ENST00000617198 U3KPZ7 1027 aaPredicted RBP20.65■□□□□ 0.9
DDX1-207ENST00000617198 FPGT-TNNI3KV9GXZ4 949 aa20.65■□□□□ 0.9
DDX1-207ENST00000617198 TDRD7Q8NHU6 1098 aaKnown RBP20.65■□□□□ 0.9
DDX1-207ENST00000617198 BRF1Q92994 677 aa20.65■□□□□ 0.9
DDX1-207ENST00000617198 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.64■□□□□ 0.89
DDX1-207ENST00000617198 PLA2G4DQ86XP0 818 aa20.64■□□□□ 0.89
DDX1-207ENST00000617198 ZSCAN16Q9H4T2 348 aaPredicted RBP20.64■□□□□ 0.89
DDX1-207ENST00000617198 BCL2L12Q9HB09 334 aa20.64■□□□□ 0.89
DDX1-207ENST00000617198 RFX5P48382 616 aaPredicted RBP20.64■□□□□ 0.89
DDX1-207ENST00000617198 Q6ZUG5 572 aa20.64■□□□□ 0.89
DDX1-207ENST00000617198 CCDC186Q7Z3E2 898 aa20.64■□□□□ 0.89
DDX1-207ENST00000617198 ANKLE2Q86XL3 938 aa20.64■□□□□ 0.89
DDX1-207ENST00000617198 SMAP1Q8IYB5 467 aaPredicted RBP20.64■□□□□ 0.89
DDX1-207ENST00000617198 H3BQV1 296 aa20.63■□□□□ 0.89
DDX1-207ENST00000617198 RIOK3O14730 519 aaKnown RBP20.63■□□□□ 0.89
DDX1-207ENST00000617198 HSP90B1P14625 803 aaKnown RBP20.63■□□□□ 0.89
DDX1-207ENST00000617198 ZNF75DP51815 510 aa20.63■□□□□ 0.89
DDX1-207ENST00000617198 PTPN12Q05209 780 aaKnown RBP20.63■□□□□ 0.89
DDX1-207ENST00000617198 TFCP2Q12800 502 aa20.63■□□□□ 0.89
DDX1-207ENST00000617198 IFFO2Q5TF58 517 aa20.63■□□□□ 0.89
DDX1-207ENST00000617198 DRC7Q8IY82 874 aa20.63■□□□□ 0.89
DDX1-207ENST00000617198 TRIM5Q9C035 493 aa20.63■□□□□ 0.89
DDX1-207ENST00000617198 SLC52A2Q9HAB3 445 aa20.63■□□□□ 0.89
DDX1-207ENST00000617198 ZNF609O15014 1411 aa20.63■□□□□ 0.89
DDX1-207ENST00000617198 ZNF165P49910 485 aa20.62■□□□□ 0.89
DDX1-207ENST00000617198 LMOD2Q6P5Q4 547 aa20.62■□□□□ 0.89
DDX1-207ENST00000617198 ORAI2Q96SN7 254 aa20.62■□□□□ 0.89
DDX1-207ENST00000617198 CFAP45Q9UL16 551 aa20.62■□□□□ 0.89
DDX1-207ENST00000617198 FAM177BA6PVY3 158 aa20.62■□□□□ 0.89
DDX1-207ENST00000617198 CAVIN2O95810 425 aa20.62■□□□□ 0.89
DDX1-207ENST00000617198 MCMDC2Q4G0Z9 681 aa20.62■□□□□ 0.89
DDX1-207ENST00000617198 ANKRD13DQ6ZTN6 518 aa20.62■□□□□ 0.89
DDX1-207ENST00000617198 CYP21A2P08686 494 aa20.61■□□□□ 0.89
DDX1-207ENST00000617198 CCDC129Q6ZRS4 1044 aa20.61■□□□□ 0.89
DDX1-207ENST00000617198 DNAJC2Q99543 621 aaKnown RBP20.61■□□□□ 0.89
DDX1-207ENST00000617198 DNAJC25Q9H1X3 360 aa20.61■□□□□ 0.89
DDX1-207ENST00000617198 NDUFB9Q9Y6M9 179 aa20.61■□□□□ 0.89
DDX1-207ENST00000617198 SCN11AQ9UI33 1791 aa20.6■□□□□ 0.89
DDX1-207ENST00000617198 RABL6Q3YEC7 729 aaPredicted RBP20.6■□□□□ 0.89
DDX1-207ENST00000617198 DDX11Q96FC9 970 aa20.6■□□□□ 0.89
DDX1-207ENST00000617198 SEC62Q99442 399 aaKnown RBP20.6■□□□□ 0.89
DDX1-207ENST00000617198 HAUS7Q99871 368 aa20.6■□□□□ 0.89
DDX1-207ENST00000617198 LLPHQ9BRT6 129 aaKnown RBP20.6■□□□□ 0.89
DDX1-207ENST00000617198 SCRN1Q12765 414 aa20.6■□□□□ 0.89
DDX1-207ENST00000617198 SMARCC2Q8TAQ2 1214 aa20.6■□□□□ 0.89
DDX1-207ENST00000617198 ERBB3P21860 1342 aa20.6■□□□□ 0.89
DDX1-207ENST00000617198 KDM6AO15550 1401 aaPredicted RBP20.59■□□□□ 0.89
DDX1-207ENST00000617198 LRP10Q7Z4F1 713 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms