RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 G3BP1Q13283 466 aaKnown RBP eCLIP16.21■□□□□ 0.19
TNFRSF11A-205ENST00000616710 TAF7Q15545 349 aaPredicted RBP16.21■□□□□ 0.19
TNFRSF11A-205ENST00000616710 CCDC30Q5VVM6 783 aa16.21■□□□□ 0.19
TNFRSF11A-205ENST00000616710 CTR9Q6PD62 1173 aa16.21■□□□□ 0.19
TNFRSF11A-205ENST00000616710 FOXR1Q6PIV2 292 aa16.21■□□□□ 0.19
TNFRSF11A-205ENST00000616710 GOLGA5Q8TBA6 731 aa16.21■□□□□ 0.19
TNFRSF11A-205ENST00000616710 PARD6BQ9BYG5 372 aa16.21■□□□□ 0.19
TNFRSF11A-205ENST00000616710 TCHHQ07283 1943 aa16.21■□□□□ 0.19
TNFRSF11A-205ENST00000616710 NCKAP5LQ9HCH0 1330 aa16.21■□□□□ 0.19
TNFRSF11A-205ENST00000616710 WDHD1O75717 1129 aaPredicted RBP16.21■□□□□ 0.19
TNFRSF11A-205ENST00000616710 GLRX3O76003 335 aaKnown RBP16.21■□□□□ 0.19
TNFRSF11A-205ENST00000616710 E4F1Q66K89 784 aaPredicted RBP16.21■□□□□ 0.19
TNFRSF11A-205ENST00000616710 TTC19Q6DKK2 380 aaPredicted RBP16.21■□□□□ 0.19
TNFRSF11A-205ENST00000616710 ANKRD20A12PQ8NF67 263 aa16.21■□□□□ 0.19
TNFRSF11A-205ENST00000616710 PDE6BP35913 854 aa16.21■□□□□ 0.18
TNFRSF11A-205ENST00000616710 ATP8B2P98198 1209 aa16.21■□□□□ 0.18
TNFRSF11A-205ENST00000616710 VPS53Q5VIR6 699 aa16.21■□□□□ 0.18
TNFRSF11A-205ENST00000616710 SRLQ86TD4 932 aa16.21■□□□□ 0.18
TNFRSF11A-205ENST00000616710 ZNF396Q96N95 335 aaPredicted RBP16.21■□□□□ 0.18
TNFRSF11A-205ENST00000616710 DPCR1Q3MIW9 517 aa16.2■□□□□ 0.18
TNFRSF11A-205ENST00000616710 SUGCTQ9HAC7 445 aa16.2■□□□□ 0.18
TNFRSF11A-205ENST00000616710 ATP1A3P13637 1013 aa16.2■□□□□ 0.18
TNFRSF11A-205ENST00000616710 TDO2P48775 406 aa16.2■□□□□ 0.18
TNFRSF11A-205ENST00000616710 ADKP55263 362 aaKnown RBP16.2■□□□□ 0.18
TNFRSF11A-205ENST00000616710 CCZ1BP86790 482 aa16.2■□□□□ 0.18
TNFRSF11A-205ENST00000616710 CCZ1P86791 482 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF11A-205ENST00000616710 EIF3CLB5ME19 914 aaKnown RBP16.2■□□□□ 0.18
TNFRSF11A-205ENST00000616710 ECM2O94769 699 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF11A-205ENST00000616710 LONRF2Q1L5Z9 754 aa16.2■□□□□ 0.18
TNFRSF11A-205ENST00000616710 GOLGA1Q92805 767 aa16.2■□□□□ 0.18
TNFRSF11A-205ENST00000616710 EDC3Q96F86 508 aaKnown RBP16.2■□□□□ 0.18
TNFRSF11A-205ENST00000616710 MRFAP1L1Q96HT8 127 aa16.2■□□□□ 0.18
TNFRSF11A-205ENST00000616710 EIF3CQ99613 913 aaKnown RBP16.2■□□□□ 0.18
TNFRSF11A-205ENST00000616710 ACBD3Q9H3P7 528 aa16.2■□□□□ 0.18
TNFRSF11A-205ENST00000616710 ANKRD1Q15327 319 aa16.19■□□□□ 0.18
TNFRSF11A-205ENST00000616710 LONRF3Q496Y0 759 aa16.19■□□□□ 0.18
TNFRSF11A-205ENST00000616710 CAGE1Q8TC20 777 aa16.19■□□□□ 0.18
TNFRSF11A-205ENST00000616710 C14orf93Q9H972 538 aaKnown RBP16.19■□□□□ 0.18
TNFRSF11A-205ENST00000616710 RAPGEF6Q8TEU7 1601 aa16.19■□□□□ 0.18
TNFRSF11A-205ENST00000616710 LRRFIP1Q32MZ4 808 aaKnown RBP16.19■□□□□ 0.18
TNFRSF11A-205ENST00000616710 TEX2Q8IWB9 1127 aa16.19■□□□□ 0.18
TNFRSF11A-205ENST00000616710 FBXO18Q8NFZ0 1043 aa16.19■□□□□ 0.18
TNFRSF11A-205ENST00000616710 BICC1Q9H694 974 aaKnown RBP16.19■□□□□ 0.18
TNFRSF11A-205ENST00000616710 EIF2AK4Q9P2K8 1649 aaKnown RBP16.19■□□□□ 0.18
TNFRSF11A-205ENST00000616710 MAP2K2P36507 400 aa16.19■□□□□ 0.18
TNFRSF11A-205ENST00000616710 NMIQ13287 307 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF11A-205ENST00000616710 CYB5RLQ6IPT4 315 aa16.19■□□□□ 0.18
TNFRSF11A-205ENST00000616710 SYCP2Q9BX26 1530 aa16.19■□□□□ 0.18
TNFRSF11A-205ENST00000616710 Q6ZUG5 572 aa16.18■□□□□ 0.18
TNFRSF11A-205ENST00000616710 PTPRCP08575 1304 aa16.18■□□□□ 0.18
TNFRSF11A-205ENST00000616710 SSBP05455 408 aaKnown RBP eCLIP16.18■□□□□ 0.18
TNFRSF11A-205ENST00000616710 USP28Q96RU2 1077 aa16.18■□□□□ 0.18
TNFRSF11A-205ENST00000616710 CTAGE5O15320 804 aa16.18■□□□□ 0.18
TNFRSF11A-205ENST00000616710 N4BP1O75113 896 aaKnown RBP16.18■□□□□ 0.18
TNFRSF11A-205ENST00000616710 ATP2C2O75185 946 aa16.18■□□□□ 0.18
TNFRSF11A-205ENST00000616710 RNF187Q5TA31 235 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF11A-205ENST00000616710 IRX2Q9BZI1 471 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF11A-205ENST00000616710 LSG1Q9H089 658 aaKnown RBP16.18■□□□□ 0.18
TNFRSF11A-205ENST00000616710 TULP2O00295 520 aa16.17■□□□□ 0.18
TNFRSF11A-205ENST00000616710 FANCCQ00597 558 aa16.17■□□□□ 0.18
TNFRSF11A-205ENST00000616710 CC2D1AQ6P1N0 951 aaPredicted RBP16.17■□□□□ 0.18
TNFRSF11A-205ENST00000616710 NYAP1Q6ZVC0 841 aa16.17■□□□□ 0.18
TNFRSF11A-205ENST00000616710 PPM1EQ8WY54 764 aa16.17■□□□□ 0.18
TNFRSF11A-205ENST00000616710 SEC62Q99442 399 aaKnown RBP16.17■□□□□ 0.18
TNFRSF11A-205ENST00000616710 PHAXQ9H814 394 aaKnown RBP16.17■□□□□ 0.18
TNFRSF11A-205ENST00000616710 FRMD3A2A2Y4 597 aa16.17■□□□□ 0.18
TNFRSF11A-205ENST00000616710 SASH3O75995 380 aa16.17■□□□□ 0.18
TNFRSF11A-205ENST00000616710 MTX1Q13505 466 aa16.17■□□□□ 0.18
TNFRSF11A-205ENST00000616710 CCDC91Q7Z6B0 441 aa16.17■□□□□ 0.18
TNFRSF11A-205ENST00000616710 CEP57Q86XR8 500 aa16.17■□□□□ 0.18
TNFRSF11A-205ENST00000616710 NEUROD6Q96NK8 337 aa16.16■□□□□ 0.18
TNFRSF11A-205ENST00000616710 CRACR2AQ9BSW2 395 aa16.16■□□□□ 0.18
TNFRSF11A-205ENST00000616710 CHMP4BP1P59074 171 aa16.16■□□□□ 0.18
TNFRSF11A-205ENST00000616710 HSP90AB2PQ58FF8 381 aa16.16■□□□□ 0.18
TNFRSF11A-205ENST00000616710 ZNF569Q5MCW4 686 aa16.16■□□□□ 0.18
TNFRSF11A-205ENST00000616710 CAVIN2O95810 425 aa16.16■□□□□ 0.18
TNFRSF11A-205ENST00000616710 CCDC129Q6ZRS4 1044 aa16.16■□□□□ 0.18
TNFRSF11A-205ENST00000616710 CNNM3Q8NE01 707 aa16.16■□□□□ 0.18
TNFRSF11A-205ENST00000616710 ECHDC1Q9NTX5 307 aa16.16■□□□□ 0.18
TNFRSF11A-205ENST00000616710 CFAP74Q9C0B2 1584 aa16.16■□□□□ 0.18
TNFRSF11A-205ENST00000616710 ZMYND10O75800 440 aa16.15■□□□□ 0.18
TNFRSF11A-205ENST00000616710 KIAA0754O94854 1291 aa16.15■□□□□ 0.18
TNFRSF11A-205ENST00000616710 ARMCX5Q6P1M9 558 aa16.15■□□□□ 0.18
TNFRSF11A-205ENST00000616710 MRPS27Q92552 414 aaKnown RBP16.15■□□□□ 0.18
TNFRSF11A-205ENST00000616710 DHX58Q96C10 678 aa16.15■□□□□ 0.18
TNFRSF11A-205ENST00000616710 EFCAB8A8MWE9 144 aa16.15■□□□□ 0.18
TNFRSF11A-205ENST00000616710 KIF5CO60282 957 aa16.15■□□□□ 0.18
TNFRSF11A-205ENST00000616710 H2AFXP16104 143 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF11A-205ENST00000616710 APOBRQ0VD83 1088 aa16.15■□□□□ 0.18
TNFRSF11A-205ENST00000616710 SF3A3Q12874 501 aaKnown RBP eCLIP16.15■□□□□ 0.18
TNFRSF11A-205ENST00000616710 RUFY1Q96T51 708 aa16.15■□□□□ 0.18
TNFRSF11A-205ENST00000616710 ATP2B2Q01814 1243 aa16.15■□□□□ 0.18
TNFRSF11A-205ENST00000616710 NBPF11Q86T75 865 aa16.15■□□□□ 0.18
TNFRSF11A-205ENST00000616710 CAPZA3Q96KX2 299 aa16.15■□□□□ 0.18
TNFRSF11A-205ENST00000616710 NBPF7P0C2Y1 421 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF11A-205ENST00000616710 MATR3P43243 847 aaKnown RBP eCLIP16.14■□□□□ 0.17
TNFRSF11A-205ENST00000616710 PACS2Q86VP3 889 aa16.14■□□□□ 0.17
TNFRSF11A-205ENST00000616710 COL9A3Q14050 684 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF11A-205ENST00000616710 SLFNL1Q499Z3 407 aa16.14■□□□□ 0.17
TNFRSF11A-205ENST00000616710 ERC1Q8IUD2 1116 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms