RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 CTNNBL1Q8WYA6 563 aaPredicted RBP5.23□□□□□ -1.57
CHD9-221ENST00000615216 MBIPQ9NS73 344 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 FSD2A1L4K1 749 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 TBCAO75347 108 aaKnown RBP5.23□□□□□ -1.57
CHD9-221ENST00000615216 IVLP07476 585 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 C6orf163Q5TEZ5 329 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 BICDL1Q6ZP65 573 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 FMNL3Q8IVF7 1028 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 MPNDQ8N594 471 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 TSNARE1Q96NA8 513 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 SELENOOQ9BVL4 669 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 C14orf93Q9H972 538 aaKnown RBP5.23□□□□□ -1.57
CHD9-221ENST00000615216 USP16Q9Y5T5 823 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 TTC41PQ6P2S7 1318 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 SYKP43405 635 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 CCDC152Q4G0S7 254 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 CCDC184Q52MB2 194 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 SPATA24Q86W54 205 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 CKAP2LQ8IYA6 745 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 PARD3Q8TEW0 1356 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 ANKRD24Q8TF21 1146 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 RBM25P49756 843 aaKnown RBP5.23□□□□□ -1.57
CHD9-221ENST00000615216 HS1BP3Q53T59 392 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 C20orf194Q5TEA3 1177 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 THUMPD2Q9BTF0 503 aaKnown RBP5.23□□□□□ -1.57
CHD9-221ENST00000615216 USP25Q9UHP3 1055 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 GNAT2P19087 354 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 ZNF165P49910 485 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 GNAQP50148 359 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 ST5P78524 1137 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 CEP63Q96MT8 703 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 TSGA10Q9BZW7 698 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 A2MP01023 1474 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 CYLC1P35663 651 aaPredicted RBP5.22□□□□□ -1.57
CHD9-221ENST00000615216 CCDC155Q8N6L0 562 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 POLR3AO14802 1390 aaPredicted RBP5.22□□□□□ -1.57
CHD9-221ENST00000615216 SNRPA1P09661 255 aaKnown RBP5.22□□□□□ -1.57
CHD9-221ENST00000615216 IFNL2Q8IZJ0 200 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 SYCP3Q8IZU3 236 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 TNRQ92752 1358 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 WDR7Q9Y4E6 1490 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 UBA7P41226 1012 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 PIP4K2BP78356 416 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 CCT2P78371 535 aaKnown RBP5.22□□□□□ -1.57
CHD9-221ENST00000615216 ORC3Q9UBD5 711 aaPredicted RBP5.22□□□□□ -1.57
CHD9-221ENST00000615216 ALDH1L1O75891 902 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 STAT6P42226 847 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 HLTFQ14527 1009 aaKnown RBP eCLIP5.22□□□□□ -1.573e-7■■□□□ 11.9
CHD9-221ENST00000615216 WTAPQ15007 396 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 RNF187Q5TA31 235 aaPredicted RBP5.22□□□□□ -1.57
CHD9-221ENST00000615216 IKBKGQ9Y6K9 419 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 WAPLQ7Z5K2 1190 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 CCDC85AQ96PX6 553 aaPredicted RBP5.22□□□□□ -1.57
CHD9-221ENST00000615216 CCDC8Q9H0W5 538 aaPredicted RBP5.22□□□□□ -1.57
CHD9-221ENST00000615216 PPP1R1BQ9UD71 204 aaPredicted RBP5.22□□□□□ -1.57
CHD9-221ENST00000615216 CTAGE9A4FU28 777 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 CALM1P0DP23 149 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 CALM2P0DP24 149 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 CALM3P0DP25 149 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 XPCQ01831 940 aaPredicted RBP5.22□□□□□ -1.57
CHD9-221ENST00000615216 ATL3Q6DD88 541 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 MAATS1Q7Z4T9 603 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 MPRIPQ6WCQ1 1025 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 JADE2Q9NQC1 790 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 BCCIPQ9P287 314 aaKnown RBP eCLIP5.22□□□□□ -1.57
CHD9-221ENST00000615216 BICDL2A1A5D9 508 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 NBPF7P0C2Y1 421 aaPredicted RBP5.22□□□□□ -1.57
CHD9-221ENST00000615216 FERP16591 822 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 KRT222Q8N1A0 295 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 ANKS4BQ8N8V4 417 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 LMBR1Q8WVP7 490 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 TRIM47Q96LD4 638 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 SLC26A6Q9BXS9 759 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.22□□□□□ -1.574e-10■■■■□ 20.7
CHD9-221ENST00000615216 UHRF1BP1LA0JNW5 1464 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 OPA1O60313 960 aa5.22□□□□□ -1.57
CHD9-221ENST00000615216 ZC3H6P61129 1189 aaKnown RBP5.22□□□□□ -1.57
CHD9-221ENST00000615216 DDX46Q7L014 1031 aaKnown RBP5.22□□□□□ -1.57
CHD9-221ENST00000615216 RTN1Q16799 776 aa5.21□□□□□ -1.57
CHD9-221ENST00000615216 FAM200AQ8TCP9 573 aa5.21□□□□□ -1.57
CHD9-221ENST00000615216 ESR2Q92731 530 aa5.21□□□□□ -1.57
CHD9-221ENST00000615216 MRPS27Q92552 414 aaKnown RBP5.21□□□□□ -1.57
CHD9-221ENST00000615216 PUS7Q96PZ0 661 aaKnown RBP5.21□□□□□ -1.57
CHD9-221ENST00000615216 EMILIN1Q9Y6C2 1016 aa5.21□□□□□ -1.57
CHD9-221ENST00000615216 PLCH2O75038 1416 aa5.21□□□□□ -1.57
CHD9-221ENST00000615216 RTL1A6NKG5 1358 aa5.21□□□□□ -1.58
CHD9-221ENST00000615216 TSPY2A6NKD2 308 aa5.21□□□□□ -1.58
CHD9-221ENST00000615216 F6X3S4 739 aa5.21□□□□□ -1.58
CHD9-221ENST00000615216 UBASH3AP57075 661 aa5.21□□□□□ -1.58
CHD9-221ENST00000615216 CCDC174Q6PII3 467 aa5.21□□□□□ -1.58
CHD9-221ENST00000615216 ABCC10Q5T3U5 1492 aa5.21□□□□□ -1.58
CHD9-221ENST00000615216 ADGRF5Q8IZF2 1346 aa5.21□□□□□ -1.58
CHD9-221ENST00000615216 ZBTB43O43298 467 aa5.21□□□□□ -1.58
CHD9-221ENST00000615216 MCMDC2Q4G0Z9 681 aa5.21□□□□□ -1.58
CHD9-221ENST00000615216 IFIT1BQ5T764 474 aaKnown RBP5.21□□□□□ -1.58
CHD9-221ENST00000615216 MICU3Q86XE3 530 aa5.21□□□□□ -1.58
CHD9-221ENST00000615216 RIMS2Q9UQ26 1411 aa5.21□□□□□ -1.58
CHD9-221ENST00000615216 COL17A1Q9UMD9 1497 aaPredicted RBP5.21□□□□□ -1.58
CHD9-221ENST00000615216 CALML3P27482 149 aa5.21□□□□□ -1.58
CHD9-221ENST00000615216 GUCY1B3Q02153 619 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms