RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 A2ML1A8K2U0 1454 aa14.71□□□□□ -0.05
MSH6-213ENST00000614496 RNMTO43148 476 aaKnown RBP14.71□□□□□ -0.05
MSH6-213ENST00000614496 TFCP2Q12800 502 aa14.71□□□□□ -0.05
MSH6-213ENST00000614496 ERCC4Q92889 916 aaPredicted RBP14.71□□□□□ -0.05
MSH6-213ENST00000614496 CCDC94Q9BW85 323 aaPredicted RBP14.71□□□□□ -0.05
MSH6-213ENST00000614496 IFIT1P09914 478 aaKnown RBP14.71□□□□□ -0.05
MSH6-213ENST00000614496 PDIA4P13667 645 aaKnown RBP14.71□□□□□ -0.05
MSH6-213ENST00000614496 APOBRQ0VD83 1088 aa14.71□□□□□ -0.05
MSH6-213ENST00000614496 TTC39AQ5SRH9 613 aa14.71□□□□□ -0.05
MSH6-213ENST00000614496 MNS1Q8NEH6 495 aa14.71□□□□□ -0.05
MSH6-213ENST00000614496 TLR7Q9NYK1 1049 aaKnown RBP14.71□□□□□ -0.05
MSH6-213ENST00000614496 ARHGEF28Q8N1W1 1705 aaKnown RBP14.71□□□□□ -0.05
MSH6-213ENST00000614496 RPS6KB1P23443 525 aa14.71□□□□□ -0.06
MSH6-213ENST00000614496 IP6K1Q92551 441 aa14.71□□□□□ -0.06
MSH6-213ENST00000614496 VIRMAQ69YN4 1812 aaKnown RBP14.71□□□□□ -0.06
MSH6-213ENST00000614496 HMG20BQ9P0W2 317 aa14.7□□□□□ -0.06
MSH6-213ENST00000614496 SERPINC1P01008 464 aa14.7□□□□□ -0.06
MSH6-213ENST00000614496 NFATC2IPQ8NCF5 419 aa14.7□□□□□ -0.06
MSH6-213ENST00000614496 LEO1Q8WVC0 666 aaPredicted RBP14.7□□□□□ -0.06
MSH6-213ENST00000614496 ANO10Q9NW15 660 aa14.7□□□□□ -0.06
MSH6-213ENST00000614496 CEP126Q9P2H0 1117 aa14.7□□□□□ -0.06
MSH6-213ENST00000614496 LMBR1LQ6UX01 489 aa14.7□□□□□ -0.06
MSH6-213ENST00000614496 SIRT1Q96EB6 747 aa14.7□□□□□ -0.06
MSH6-213ENST00000614496 ZBTB3Q9H5J0 574 aa14.7□□□□□ -0.06
MSH6-213ENST00000614496 ZSWIM6Q9HCJ5 1215 aa14.7□□□□□ -0.06
MSH6-213ENST00000614496 MAP2P11137 1827 aaKnown RBP14.7□□□□□ -0.06
MSH6-213ENST00000614496 ANKLE2Q86XL3 938 aa14.69□□□□□ -0.06
MSH6-213ENST00000614496 SEC62Q99442 399 aaKnown RBP14.69□□□□□ -0.06
MSH6-213ENST00000614496 CCDC158Q5M9N0 1113 aa14.69□□□□□ -0.06
MSH6-213ENST00000614496 BCL2L12Q9HB09 334 aa14.69□□□□□ -0.06
MSH6-213ENST00000614496 NCOA5Q9HCD5 579 aaKnown RBP14.69□□□□□ -0.06
MSH6-213ENST00000614496 SKILP12757 684 aa14.69□□□□□ -0.06
MSH6-213ENST00000614496 DBNDD2Q9BQY9 259 aa14.69□□□□□ -0.06
MSH6-213ENST00000614496 U2AF2P26368 475 aaKnown RBP eCLIP14.68□□□□□ -0.062e-9■■■■■ 28.4
MSH6-213ENST00000614496 STX1AQ16623 288 aa14.68□□□□□ -0.06
MSH6-213ENST00000614496 RRP12Q5JTH9 1297 aaKnown RBP14.68□□□□□ -0.06
MSH6-213ENST00000614496 CEP135Q66GS9 1140 aa14.68□□□□□ -0.06
MSH6-213ENST00000614496 C8orf76Q96K31 380 aa14.68□□□□□ -0.06
MSH6-213ENST00000614496 NRBP1Q9UHY1 535 aa14.68□□□□□ -0.06
MSH6-213ENST00000614496 NEURL4Q96JN8 1562 aa14.68□□□□□ -0.06
MSH6-213ENST00000614496 CRB1P82279 1406 aa14.68□□□□□ -0.06
MSH6-213ENST00000614496 A0A087WWV3 80 aa14.68□□□□□ -0.06
MSH6-213ENST00000614496 NR1I2O75469 434 aa14.68□□□□□ -0.06
MSH6-213ENST00000614496 AOPEPQ8N6M6 819 aa14.68□□□□□ -0.06
MSH6-213ENST00000614496 MCMDC2Q4G0Z9 681 aa14.68□□□□□ -0.06
MSH6-213ENST00000614496 HSP90AB3PQ58FF7 597 aa14.68□□□□□ -0.06
MSH6-213ENST00000614496 DHX16O60231 1041 aaKnown RBP14.67□□□□□ -0.06
MSH6-213ENST00000614496 CHRNA2Q15822 529 aa14.67□□□□□ -0.06
MSH6-213ENST00000614496 CCDC57Q2TAC2 916 aa14.67□□□□□ -0.06
MSH6-213ENST00000614496 GCP02774 474 aa14.67□□□□□ -0.06
MSH6-213ENST00000614496 TMC6Q7Z403 805 aa14.67□□□□□ -0.06
MSH6-213ENST00000614496 TBX22Q9Y458 520 aa14.67□□□□□ -0.06
MSH6-213ENST00000614496 USP32Q8NFA0 1604 aa14.67□□□□□ -0.06
MSH6-213ENST00000614496 TIMM10P62072 90 aa14.67□□□□□ -0.06
MSH6-213ENST00000614496 OLFM4Q6UX06 510 aa14.67□□□□□ -0.06
MSH6-213ENST00000614496 TM6SF1Q9BZW5 370 aa14.67□□□□□ -0.06
MSH6-213ENST00000614496 ZSCAN16Q9H4T2 348 aaPredicted RBP14.67□□□□□ -0.06
MSH6-213ENST00000614496 DDX21Q9NR30 783 aaKnown RBP eCLIP14.67□□□□□ -0.06
MSH6-213ENST00000614496 SETD1BQ9UPS6 1966 aaKnown RBP14.67□□□□□ -0.06
MSH6-213ENST00000614496 FRMPD1Q5SYB0 1578 aa14.67□□□□□ -0.06
MSH6-213ENST00000614496 PTPDC1A2A3K4 754 aa14.66□□□□□ -0.06
MSH6-213ENST00000614496 PES1O00541 588 aaKnown RBP14.66□□□□□ -0.06
MSH6-213ENST00000614496 POLA2Q14181 598 aa14.66□□□□□ -0.06
MSH6-213ENST00000614496 SYTL4Q96C24 671 aaPredicted RBP14.66□□□□□ -0.06
MSH6-213ENST00000614496 BABAM1Q9NWV8 329 aa14.66□□□□□ -0.06
MSH6-213ENST00000614496 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.66□□□□□ -0.06
MSH6-213ENST00000614496 USP16Q9Y5T5 823 aa14.66□□□□□ -0.06
MSH6-213ENST00000614496 OTUD7BQ6GQQ9 843 aa14.66□□□□□ -0.06
MSH6-213ENST00000614496 GOLGA8BA8MQT2 603 aa14.66□□□□□ -0.06
MSH6-213ENST00000614496 GIGYF1O75420 1035 aaPredicted RBP14.66□□□□□ -0.06
MSH6-213ENST00000614496 SFPQP23246 707 aaKnown RBP eCLIP14.66□□□□□ -0.06
MSH6-213ENST00000614496 ATF3P18847 181 aa14.66□□□□□ -0.06
MSH6-213ENST00000614496 ZNF589Q86UQ0 364 aaPredicted RBP14.66□□□□□ -0.06
MSH6-213ENST00000614496 CCDC144CPQ8IYA2 1237 aa14.66□□□□□ -0.06
MSH6-213ENST00000614496 KIF18AQ8NI77 898 aa14.66□□□□□ -0.06
MSH6-213ENST00000614496 TTC14Q96N46 770 aa14.66□□□□□ -0.06
MSH6-213ENST00000614496 TMX1Q9H3N1 280 aa14.66□□□□□ -0.06
MSH6-213ENST00000614496 ERICH4A6NGS2 130 aa14.65□□□□□ -0.06
MSH6-213ENST00000614496 EPB41L2O43491 1005 aaKnown RBP14.65□□□□□ -0.06
MSH6-213ENST00000614496 ZNF75DP51815 510 aa14.65□□□□□ -0.06
MSH6-213ENST00000614496 CFAP100Q494V2 611 aa14.65□□□□□ -0.06
MSH6-213ENST00000614496 HSP90AA4PQ58FG1 418 aa14.65□□□□□ -0.06
MSH6-213ENST00000614496 CCDC82Q8N4S0 544 aa14.65□□□□□ -0.06
MSH6-213ENST00000614496 CLSTN2Q9H4D0 955 aa14.65□□□□□ -0.06
MSH6-213ENST00000614496 A0A0U1RQG5 324 aaPredicted RBP14.65□□□□□ -0.06
MSH6-213ENST00000614496 CTAGE5O15320 804 aa14.65□□□□□ -0.06
MSH6-213ENST00000614496 IMMTQ16891 758 aaKnown RBP14.65□□□□□ -0.06
MSH6-213ENST00000614496 ORC3Q9UBD5 711 aaPredicted RBP14.65□□□□□ -0.06
MSH6-213ENST00000614496 IDH1O75874 414 aaKnown RBP14.65□□□□□ -0.06
MSH6-213ENST00000614496 HMGB1P09429 215 aaKnown RBP14.65□□□□□ -0.06
MSH6-213ENST00000614496 EVA1CP58658 441 aa14.65□□□□□ -0.06
MSH6-213ENST00000614496 TTLL5Q6EMB2 1281 aa14.65□□□□□ -0.06
MSH6-213ENST00000614496 A0A1B0GVL5 298 aa14.64□□□□□ -0.07
MSH6-213ENST00000614496 DIP2CQ9Y2E4 1556 aa14.64□□□□□ -0.07
MSH6-213ENST00000614496 CCDC69A6NI79 296 aa14.64□□□□□ -0.07
MSH6-213ENST00000614496 HOXB7P09629 217 aa14.64□□□□□ -0.07
MSH6-213ENST00000614496 KRT28Q7Z3Y7 464 aa14.64□□□□□ -0.07
MSH6-213ENST00000614496 MAP4K1Q92918 833 aa14.64□□□□□ -0.07
MSH6-213ENST00000614496 MRVI1Q9Y6F6 885 aa14.64□□□□□ -0.07
MSH6-213ENST00000614496 SLC3A2P08195 630 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms