RNA–Protein interactions for RNA: ENST00000612123.3

PBX1-221, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 6,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-221ENST00000612123 CPS1P31327 1500 aa7.81□□□□□ -1.16
PBX1-221ENST00000612123 CTCFLQ8NI51 663 aaPredicted RBP7.81□□□□□ -1.16
PBX1-221ENST00000612123 MKNK2Q9HBH9 465 aa7.81□□□□□ -1.16
PBX1-221ENST00000612123 LUC7LQ9NQ29 371 aaKnown RBP7.81□□□□□ -1.16
PBX1-221ENST00000612123 MAGEC2Q9UBF1 373 aaPredicted RBP7.81□□□□□ -1.16
PBX1-221ENST00000612123 KRT18P05783 430 aaKnown RBP7.81□□□□□ -1.16
PBX1-221ENST00000612123 IL15P40933 162 aaPredicted RBP7.81□□□□□ -1.16
PBX1-221ENST00000612123 ZNF772Q68DY9 489 aaPredicted RBP7.81□□□□□ -1.16
PBX1-221ENST00000612123 UBE3BQ7Z3V4 1068 aa7.81□□□□□ -1.16
PBX1-221ENST00000612123 CRACR2BQ8N4Y2 399 aaPredicted RBP7.81□□□□□ -1.16
PBX1-221ENST00000612123 FRMPD1Q5SYB0 1578 aa7.81□□□□□ -1.16
PBX1-221ENST00000612123 RDXP35241 583 aaKnown RBP7.81□□□□□ -1.16
PBX1-221ENST00000612123 NBPF6Q5VWK0 638 aa7.81□□□□□ -1.16
PBX1-221ENST00000612123 NBPF5PQ86XG9 351 aaPredicted RBP7.81□□□□□ -1.16
PBX1-221ENST00000612123 NBPF4Q96M43 638 aa7.81□□□□□ -1.16
PBX1-221ENST00000612123 A0A1W2PP64 1363 aa7.81□□□□□ -1.16
PBX1-221ENST00000612123 FRMD3A2A2Y4 597 aa7.81□□□□□ -1.16
PBX1-221ENST00000612123 KIRREL3Q8IZU9 778 aa7.81□□□□□ -1.16
PBX1-221ENST00000612123 CCAR2Q8N163 923 aaKnown RBP7.81□□□□□ -1.16
PBX1-221ENST00000612123 NUP133Q8WUM0 1156 aa7.81□□□□□ -1.16
PBX1-221ENST00000612123 SMARCE1Q969G3 411 aa7.81□□□□□ -1.16
PBX1-221ENST00000612123 SETDB2Q96T68 719 aa7.81□□□□□ -1.16
PBX1-221ENST00000612123 F6X3S4 739 aa7.81□□□□□ -1.16
PBX1-221ENST00000612123 GTF2A1P52655 376 aaPredicted RBP7.81□□□□□ -1.16
PBX1-221ENST00000612123 ZNF444Q8N0Y2 327 aaPredicted RBP7.81□□□□□ -1.16
PBX1-221ENST00000612123 MAP3K19Q56UN5 1328 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 TPTE2Q6XPS3 522 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 NUTM1Q86Y26 1132 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 MTMR7Q9Y216 660 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 KIDINS220Q9ULH0 1771 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 GRM8O00222 908 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 ZNF213O14771 459 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 ATP2B1P20020 1258 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 HNRNPH2P55795 449 aaKnown RBP7.8□□□□□ -1.16
PBX1-221ENST00000612123 BOLA2Q9H3K6 86 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 CCDC192P0DO97 292 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 HOXC9P31274 260 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 TNIP1Q15025 636 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 RAB34Q9BZG1 259 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 EPC1Q9H2F5 836 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 SLC24A3Q9HC58 644 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 KIAA1210Q9ULL0 1709 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 MROH2AA6NES4 1674 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 C6orf229H3BNL8 230 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 CCDC173Q0VFZ6 552 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 HOMER1Q86YM7 354 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 ANKRD18AQ8IVF6 992 aa7.8□□□□□ -1.16
PBX1-221ENST00000612123 SEC63Q9UGP8 760 aaKnown RBP7.8□□□□□ -1.16
PBX1-221ENST00000612123 ME1P48163 572 aa7.79□□□□□ -1.16
PBX1-221ENST00000612123 CCDC12Q8WUD4 166 aaPredicted RBP7.79□□□□□ -1.16
PBX1-221ENST00000612123 CCDC85AQ96PX6 553 aaPredicted RBP7.79□□□□□ -1.16
PBX1-221ENST00000612123 EYA1Q99502 592 aa7.79□□□□□ -1.16
PBX1-221ENST00000612123 SCAND2PQ9GZW5 306 aaPredicted RBP7.79□□□□□ -1.16
PBX1-221ENST00000612123 NBPF14Q5TI25 921 aa7.79□□□□□ -1.16
PBX1-221ENST00000612123 ISM2Q6H9L7 571 aa7.79□□□□□ -1.16
PBX1-221ENST00000612123 COPS6Q7L5N1 327 aa7.79□□□□□ -1.16
PBX1-221ENST00000612123 ANKRD44Q8N8A2 993 aa7.79□□□□□ -1.16
PBX1-221ENST00000612123 SPHKAPQ2M3C7 1700 aa7.79□□□□□ -1.16
PBX1-221ENST00000612123 ADAMTSL3P82987 1691 aa7.79□□□□□ -1.16
PBX1-221ENST00000612123 XAGE3Q8WTP9 111 aa7.79□□□□□ -1.16
PBX1-221ENST00000612123 FIBPO43427 364 aa7.79□□□□□ -1.16
PBX1-221ENST00000612123 GPTP24298 496 aa7.79□□□□□ -1.16
PBX1-221ENST00000612123 KIF5BP33176 963 aa7.79□□□□□ -1.16
PBX1-221ENST00000612123 ATP6V1AP38606 617 aa7.79□□□□□ -1.16
PBX1-221ENST00000612123 PDE4BQ07343 736 aa7.79□□□□□ -1.16
PBX1-221ENST00000612123 TMTC2Q8N394 836 aa7.79□□□□□ -1.16
PBX1-221ENST00000612123 EHMT1Q9H9B1 1298 aa7.79□□□□□ -1.16
PBX1-221ENST00000612123 DDX21Q9NR30 783 aaKnown RBP eCLIP7.79□□□□□ -1.16
PBX1-221ENST00000612123 HLA-DOAP06340 250 aa7.79□□□□□ -1.16
PBX1-221ENST00000612123 PARP10Q53GL7 1025 aa7.79□□□□□ -1.16
PBX1-221ENST00000612123 ODF2Q5BJF6 829 aa7.79□□□□□ -1.16
PBX1-221ENST00000612123 SLAIN2Q9P270 581 aa7.79□□□□□ -1.16
PBX1-221ENST00000612123 RTCBQ9Y3I0 505 aaKnown RBP7.79□□□□□ -1.16
PBX1-221ENST00000612123 PER1O15534 1290 aaPredicted RBP7.78□□□□□ -1.16
PBX1-221ENST00000612123 CCDC39Q9UFE4 941 aa7.78□□□□□ -1.16
PBX1-221ENST00000612123 SEMA3FQ13275 785 aa7.78□□□□□ -1.16
PBX1-221ENST00000612123 MTHFSDQ2M296 383 aaKnown RBP7.78□□□□□ -1.16
PBX1-221ENST00000612123 ZSCAN23Q3MJ62 389 aa7.78□□□□□ -1.16
PBX1-221ENST00000612123 RHPN1Q8TCX5 695 aa7.78□□□□□ -1.16
PBX1-221ENST00000612123 ZNHIT6Q9NWK9 470 aaKnown RBP7.78□□□□□ -1.16
PBX1-221ENST00000612123 SETD1BQ9UPS6 1966 aaKnown RBP7.78□□□□□ -1.16
PBX1-221ENST00000612123 DYNC1I1O14576 645 aa7.78□□□□□ -1.16
PBX1-221ENST00000612123 ATP8B2P98198 1209 aa7.78□□□□□ -1.16
PBX1-221ENST00000612123 C8orf37Q96NL8 207 aa7.78□□□□□ -1.16
PBX1-221ENST00000612123 CASTP20810 708 aaKnown RBP7.78□□□□□ -1.16
PBX1-221ENST00000612123 PYM1Q9BRP8 204 aaKnown RBP7.78□□□□□ -1.16
PBX1-221ENST00000612123 UTP14AQ9BVJ6 771 aaKnown RBP7.78□□□□□ -1.16
PBX1-221ENST00000612123 TSPY26PQ9H489 355 aa7.78□□□□□ -1.16
PBX1-221ENST00000612123 FAM83GA6ND36 823 aa7.78□□□□□ -1.16
PBX1-221ENST00000612123 MYO1BO43795 1136 aa7.78□□□□□ -1.16
PBX1-221ENST00000612123 SMC2O95347 1197 aa7.78□□□□□ -1.16
PBX1-221ENST00000612123 CDR1P51861 262 aa7.78□□□□□ -1.16
PBX1-221ENST00000612123 TIGD1Q96MW7 591 aa7.78□□□□□ -1.16
PBX1-221ENST00000612123 LIMCH1Q9UPQ0 1083 aa7.78□□□□□ -1.16
PBX1-221ENST00000612123 CBFA2T2O43439 604 aa7.77□□□□□ -1.16
PBX1-221ENST00000612123 SMARCA5O60264 1052 aaPredicted RBP7.77□□□□□ -1.16
PBX1-221ENST00000612123 CALR3Q96L12 384 aaKnown RBP7.77□□□□□ -1.16
PBX1-221ENST00000612123 SPATA32Q96LK8 384 aa7.77□□□□□ -1.16
PBX1-221ENST00000612123 CRNKL1Q9BZJ0 848 aaKnown RBP7.77□□□□□ -1.16
PBX1-221ENST00000612123 CCDC8Q9H0W5 538 aaPredicted RBP7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms