RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 ECE1P42892 770 aa22.81■■□□□ 1.24
MUC1-224ENST00000611577 PDIA6Q15084 440 aa22.8■■□□□ 1.24
MUC1-224ENST00000611577 CYP4F22Q6NT55 531 aa22.8■■□□□ 1.24
MUC1-224ENST00000611577 LRP10Q7Z4F1 713 aa22.8■■□□□ 1.24
MUC1-224ENST00000611577 ADARB2Q9NS39 739 aaKnown RBP22.8■■□□□ 1.24
MUC1-224ENST00000611577 GPRC5DQ9NZD1 345 aa22.8■■□□□ 1.24
MUC1-224ENST00000611577 ANXA1P04083 346 aa22.79■■□□□ 1.24
MUC1-224ENST00000611577 PROSER3Q2NL68 480 aa22.79■■□□□ 1.24
MUC1-224ENST00000611577 SLC10A5Q5PT55 438 aa22.79■■□□□ 1.24
MUC1-224ENST00000611577 CST9Q5W186 159 aa22.79■■□□□ 1.24
MUC1-224ENST00000611577 WDR63Q8IWG1 891 aa22.79■■□□□ 1.24
MUC1-224ENST00000611577 SUPT20HQ8NEM7 779 aa22.79■■□□□ 1.24
MUC1-224ENST00000611577 ABHD8Q96I13 439 aa22.79■■□□□ 1.24
MUC1-224ENST00000611577 BEGAINQ9BUH8 593 aa22.79■■□□□ 1.24
MUC1-224ENST00000611577 VPS33BQ9H267 617 aa22.79■■□□□ 1.24
MUC1-224ENST00000611577 IL16Q14005 1332 aa22.79■■□□□ 1.24
MUC1-224ENST00000611577 ZNF853P0CG23 659 aa22.78■■□□□ 1.24
MUC1-224ENST00000611577 GPR101Q96P66 508 aaPredicted RBP22.78■■□□□ 1.24
MUC1-224ENST00000611577 ZNRF3Q9ULT6 936 aa22.78■■□□□ 1.24
MUC1-224ENST00000611577 TLL2Q9Y6L7 1015 aa22.78■■□□□ 1.24
MUC1-224ENST00000611577 TRPM7Q96QT4 1865 aa22.77■■□□□ 1.24
MUC1-224ENST00000611577 GMPSP49915 693 aaPredicted RBP22.77■■□□□ 1.24
MUC1-224ENST00000611577 CXCL9Q07325 125 aa22.77■■□□□ 1.24
MUC1-224ENST00000611577 DPP8Q6V1X1 898 aaPredicted RBP22.77■■□□□ 1.24
MUC1-224ENST00000611577 RTFDC1Q9BY42 306 aaPredicted RBP22.77■■□□□ 1.24
MUC1-224ENST00000611577 TSR2Q969E8 191 aaKnown RBP22.76■■□□□ 1.23
MUC1-224ENST00000611577 HCLS1P14317 486 aaPredicted RBP22.75■■□□□ 1.23
MUC1-224ENST00000611577 KRT24Q2M2I5 525 aa22.75■■□□□ 1.23
MUC1-224ENST00000611577 HSP90AB3PQ58FF7 597 aa22.75■■□□□ 1.23
MUC1-224ENST00000611577 ANKRD36CQ5JPF3 1778 aa22.74■■□□□ 1.23
MUC1-224ENST00000611577 BBOX1O75936 387 aa22.74■■□□□ 1.23
MUC1-224ENST00000611577 AIMP1Q12904 312 aaKnown RBP22.74■■□□□ 1.23
MUC1-224ENST00000611577 CIAPIN1Q6FI81 312 aa22.74■■□□□ 1.23
MUC1-224ENST00000611577 NLRP10Q86W26 655 aa22.74■■□□□ 1.23
MUC1-224ENST00000611577 SP8Q8IXZ3 490 aa22.74■■□□□ 1.23
MUC1-224ENST00000611577 MPNDQ8N594 471 aa22.74■■□□□ 1.23
MUC1-224ENST00000611577 NECTIN2Q92692 538 aa22.74■■□□□ 1.23
MUC1-224ENST00000611577 LAMB2P55268 1798 aa22.73■■□□□ 1.23
MUC1-224ENST00000611577 AOC2O75106 756 aa22.73■■□□□ 1.23
MUC1-224ENST00000611577 CELF2O95319 508 aaKnown RBP22.73■■□□□ 1.23
MUC1-224ENST00000611577 KIAA2012Q0VF49 1180 aa22.73■■□□□ 1.23
MUC1-224ENST00000611577 DUSP27Q5VZP5 1158 aa22.73■■□□□ 1.23
MUC1-224ENST00000611577 DDX46Q7L014 1031 aaKnown RBP22.73■■□□□ 1.23
MUC1-224ENST00000611577 COPS6Q7L5N1 327 aa22.73■■□□□ 1.23
MUC1-224ENST00000611577 XAGE3Q8WTP9 111 aa22.73■■□□□ 1.23
MUC1-224ENST00000611577 BCL2L13Q9BXK5 485 aa22.73■■□□□ 1.23
MUC1-224ENST00000611577 GLIS2Q9BZE0 524 aaPredicted RBP22.73■■□□□ 1.23
MUC1-224ENST00000611577 MYH16Q9H6N6 1097 aa22.73■■□□□ 1.23
MUC1-224ENST00000611577 ELL2O00472 640 aaPredicted RBP22.72■■□□□ 1.23
MUC1-224ENST00000611577 RAD17O75943 681 aa22.72■■□□□ 1.23
MUC1-224ENST00000611577 TRMT112Q9UI30 125 aaKnown RBP22.72■■□□□ 1.23
MUC1-224ENST00000611577 CDHR2Q9BYE9 1310 aa22.72■■□□□ 1.23
MUC1-224ENST00000611577 HOXB7P09629 217 aa22.71■■□□□ 1.23
MUC1-224ENST00000611577 GOLGA2Q08379 1002 aa22.71■■□□□ 1.23
MUC1-224ENST00000611577 GRAPQ13588 217 aa22.71■■□□□ 1.23
MUC1-224ENST00000611577 TNIP1Q15025 636 aa22.71■■□□□ 1.23
MUC1-224ENST00000611577 HDGFL1Q5TGJ6 251 aa22.71■■□□□ 1.23
MUC1-224ENST00000611577 SAPCD2Q86UD0 394 aa22.71■■□□□ 1.23
MUC1-224ENST00000611577 GRAPLQ8TC17 118 aaPredicted RBP22.71■■□□□ 1.23
MUC1-224ENST00000611577 TSKSQ9UJT2 592 aa22.71■■□□□ 1.23
MUC1-224ENST00000611577 SH3TC1Q8TE82 1336 aa22.71■■□□□ 1.23
MUC1-224ENST00000611577 MAP2K2P36507 400 aa22.7■■□□□ 1.22
MUC1-224ENST00000611577 HNRNPUQ00839 825 aaKnown RBP eCLIP22.7■■□□□ 1.22
MUC1-224ENST00000611577 ZNF408Q9H9D4 720 aa22.7■■□□□ 1.22
MUC1-224ENST00000611577 FANCIQ9NVI1 1328 aa22.7■■□□□ 1.22
MUC1-224ENST00000611577 TCIRG1Q13488 830 aa22.69■■□□□ 1.22
MUC1-224ENST00000611577 TRPM4Q8TD43 1214 aa22.69■■□□□ 1.22
MUC1-224ENST00000611577 CHMP4AQ9BY43 222 aa22.69■■□□□ 1.22
MUC1-224ENST00000611577 FAM161AQ3B820 660 aa22.68■■□□□ 1.22
MUC1-224ENST00000611577 ZC3H15Q8WU90 426 aaKnown RBP22.68■■□□□ 1.22
MUC1-224ENST00000611577 ZNF428Q96B54 188 aa22.68■■□□□ 1.22
MUC1-224ENST00000611577 PGAP2Q9UHJ9 254 aa22.68■■□□□ 1.22
MUC1-224ENST00000611577 DUOX1Q9NRD9 1551 aa22.67■■□□□ 1.22
MUC1-224ENST00000611577 CCDC85CA6NKD9 419 aa22.67■■□□□ 1.22
MUC1-224ENST00000611577 YDJCA8MPS7 323 aa22.67■■□□□ 1.22
MUC1-224ENST00000611577 HIRAP54198 1017 aaPredicted RBP22.67■■□□□ 1.22
MUC1-224ENST00000611577 C8orf58Q8NAV2 365 aa22.67■■□□□ 1.22
MUC1-224ENST00000611577 ZNF521Q96K83 1311 aa22.66■■□□□ 1.22
MUC1-224ENST00000611577 SHTN1A0MZ66 631 aa22.66■■□□□ 1.22
MUC1-224ENST00000611577 TMC4Q7Z404 712 aa22.66■■□□□ 1.22
MUC1-224ENST00000611577 HHIPL1Q96JK4 782 aa22.66■■□□□ 1.22
MUC1-224ENST00000611577 CNOT7Q9UIV1 285 aaKnown RBP22.66■■□□□ 1.22
MUC1-224ENST00000611577 E9PSI1 815 aa22.65■■□□□ 1.22
MUC1-224ENST00000611577 H7C1D1 291 aa22.65■■□□□ 1.22
MUC1-224ENST00000611577 CA12O43570 354 aa22.65■■□□□ 1.22
MUC1-224ENST00000611577 TWISTNBQ3B726 338 aaPredicted RBP22.65■■□□□ 1.22
MUC1-224ENST00000611577 CDC37L1Q7L3B6 337 aa22.65■■□□□ 1.22
MUC1-224ENST00000611577 MICALL2Q8IY33 904 aa22.65■■□□□ 1.22
MUC1-224ENST00000611577 LRRC37AA6NMS7 1700 aa22.65■■□□□ 1.22
MUC1-224ENST00000611577 BRPF1P55201 1214 aaPredicted RBP22.64■■□□□ 1.21
MUC1-224ENST00000611577 SPINK5Q9NQ38 1064 aaPredicted RBP22.64■■□□□ 1.21
MUC1-224ENST00000611577 CHPF2Q9P2E5 772 aa22.64■■□□□ 1.21
MUC1-224ENST00000611577 DBF4Q9UBU7 674 aaPredicted RBP22.64■■□□□ 1.21
MUC1-224ENST00000611577 TAF1P21675 1872 aa22.64■■□□□ 1.21
MUC1-224ENST00000611577 EXOSC9Q06265 439 aaKnown RBP22.63■■□□□ 1.21
MUC1-224ENST00000611577 CCDC30Q5VVM6 783 aa22.63■■□□□ 1.21
MUC1-224ENST00000611577 TSPYL6Q8N831 410 aa22.63■■□□□ 1.21
MUC1-224ENST00000611577 ZBTB12Q9Y330 459 aaPredicted RBP22.63■■□□□ 1.21
MUC1-224ENST00000611577 USP48Q86UV5 1035 aa22.62■■□□□ 1.21
MUC1-224ENST00000611577 STK31Q9BXU1 1019 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms