RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 ZNF594Q96JF6 807 aaPredicted RBP14.86□□□□□ -0.03
VPS45-212ENST00000611412 CSF1RP07333 972 aa14.86□□□□□ -0.03
VPS45-212ENST00000611412 MTX1Q13505 466 aa14.86□□□□□ -0.03
VPS45-212ENST00000611412 POLA2Q14181 598 aa14.86□□□□□ -0.03
VPS45-212ENST00000611412 SLC10A5Q5PT55 438 aa14.86□□□□□ -0.03
VPS45-212ENST00000611412 SSH3Q8TE77 659 aa14.86□□□□□ -0.03
VPS45-212ENST00000611412 EXOC6BQ9Y2D4 811 aa14.86□□□□□ -0.03
VPS45-212ENST00000611412 LAMB2P55268 1798 aa14.85□□□□□ -0.03
VPS45-212ENST00000611412 HMMRO75330 724 aa14.85□□□□□ -0.03
VPS45-212ENST00000611412 NLRP3Q96P20 1036 aa14.85□□□□□ -0.03
VPS45-212ENST00000611412 SIL1Q9H173 461 aa14.85□□□□□ -0.03
VPS45-212ENST00000611412 SEC31BQ9NQW1 1179 aa14.85□□□□□ -0.03
VPS45-212ENST00000611412 MYH3P11055 1940 aa14.85□□□□□ -0.03
VPS45-212ENST00000611412 MTFR1LQ9H019 292 aa14.85□□□□□ -0.03
VPS45-212ENST00000611412 KDM2BQ8NHM5 1336 aa14.84□□□□□ -0.03
VPS45-212ENST00000611412 ITGA6P23229 1130 aa14.84□□□□□ -0.03
VPS45-212ENST00000611412 RFX5P48382 616 aaPredicted RBP14.84□□□□□ -0.03
VPS45-212ENST00000611412 CCDC57Q2TAC2 916 aa14.84□□□□□ -0.03
VPS45-212ENST00000611412 SURF6O75683 361 aaKnown RBP14.83□□□□□ -0.03
VPS45-212ENST00000611412 CCDC152Q4G0S7 254 aa14.83□□□□□ -0.03
VPS45-212ENST00000611412 SKAP1Q86WV1 359 aa14.83□□□□□ -0.03
VPS45-212ENST00000611412 NRXN2Q9P2S2 1712 aa14.83□□□□□ -0.03
VPS45-212ENST00000611412 HSP90B1P14625 803 aaKnown RBP14.83□□□□□ -0.04
VPS45-212ENST00000611412 PTPN12Q05209 780 aaKnown RBP14.83□□□□□ -0.04
VPS45-212ENST00000611412 IFIT5Q13325 482 aaKnown RBP14.83□□□□□ -0.04
VPS45-212ENST00000611412 COL4A1P02462 1669 aa14.82□□□□□ -0.04
VPS45-212ENST00000611412 TAF7LQ5H9L4 462 aa14.82□□□□□ -0.04
VPS45-212ENST00000611412 CENPQQ7L2Z9 268 aaPredicted RBP14.82□□□□□ -0.04
VPS45-212ENST00000611412 DCTPP1Q9H773 170 aa14.82□□□□□ -0.04
VPS45-212ENST00000611412 ANKRD18BA2A2Z9 1011 aa14.81□□□□□ -0.04
VPS45-212ENST00000611412 SF3B3Q15393 1217 aaKnown RBP14.81□□□□□ -0.04
VPS45-212ENST00000611412 PUS3Q9BZE2 481 aaKnown RBP14.81□□□□□ -0.04
VPS45-212ENST00000611412 TAF1P21675 1872 aa14.81□□□□□ -0.04
VPS45-212ENST00000611412 ANKRD31Q8N7Z5 1873 aa14.81□□□□□ -0.04
VPS45-212ENST00000611412 SMARCA5O60264 1052 aaPredicted RBP14.81□□□□□ -0.04
VPS45-212ENST00000611412 POLD1P28340 1107 aa14.81□□□□□ -0.04
VPS45-212ENST00000611412 OS9Q13438 667 aaPredicted RBP14.81□□□□□ -0.04
VPS45-212ENST00000611412 SOCS7O14512 581 aa14.8□□□□□ -0.04
VPS45-212ENST00000611412 LRRC24Q50LG9 513 aa14.8□□□□□ -0.04
VPS45-212ENST00000611412 BRIP1Q9BX63 1249 aa14.8□□□□□ -0.04
VPS45-212ENST00000611412 ANKRD45Q5TZF3 282 aa14.8□□□□□ -0.04
VPS45-212ENST00000611412 SMC5Q8IY18 1101 aa14.8□□□□□ -0.04
VPS45-212ENST00000611412 KLHL34Q8N239 644 aa14.8□□□□□ -0.04
VPS45-212ENST00000611412 CELF1Q92879 486 aaKnown RBP14.8□□□□□ -0.04
VPS45-212ENST00000611412 COPRSQ9NQ92 184 aa14.8□□□□□ -0.04
VPS45-212ENST00000611412 G3BP1Q13283 466 aaKnown RBP eCLIP14.79□□□□□ -0.04
VPS45-212ENST00000611412 SLC51AQ86UW1 340 aa14.79□□□□□ -0.04
VPS45-212ENST00000611412 RPGRQ92834 1020 aaKnown RBP14.79□□□□□ -0.04
VPS45-212ENST00000611412 GCC1Q96CN9 775 aa14.79□□□□□ -0.04
VPS45-212ENST00000611412 PPP1R1BQ9UD71 204 aaPredicted RBP14.79□□□□□ -0.04
VPS45-212ENST00000611412 CHRNA5P30532 468 aa14.78□□□□□ -0.04
VPS45-212ENST00000611412 PTGER2P43116 358 aa14.78□□□□□ -0.04
VPS45-212ENST00000611412 DDX46Q7L014 1031 aaKnown RBP14.78□□□□□ -0.04
VPS45-212ENST00000611412 PDZRN3Q9UPQ7 1066 aa14.78□□□□□ -0.04
VPS45-212ENST00000611412 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.78□□□□□ -0.04
VPS45-212ENST00000611412 RIC1Q4ADV7 1423 aa14.78□□□□□ -0.04
VPS45-212ENST00000611412 SPEF2Q9C093 1822 aa14.78□□□□□ -0.04
VPS45-212ENST00000611412 PDE6BP35913 854 aa14.78□□□□□ -0.04
VPS45-212ENST00000611412 LDHAL6AQ6ZMR3 332 aa14.78□□□□□ -0.04
VPS45-212ENST00000611412 SGIP1Q9BQI5 828 aa14.78□□□□□ -0.04
VPS45-212ENST00000611412 IL1RAPL2Q9NP60 686 aa14.78□□□□□ -0.04
VPS45-212ENST00000611412 NOP58Q9Y2X3 529 aaKnown RBP14.78□□□□□ -0.04
VPS45-212ENST00000611412 CRY2Q49AN0 593 aa14.77□□□□□ -0.04
VPS45-212ENST00000611412 C2CD5Q86YS7 1000 aa14.77□□□□□ -0.04
VPS45-212ENST00000611412 LNPKQ9C0E8 428 aa14.77□□□□□ -0.04
VPS45-212ENST00000611412 CNNM1Q9NRU3 951 aa14.77□□□□□ -0.04
VPS45-212ENST00000611412 RTL9Q8NET4 1388 aa14.77□□□□□ -0.05
VPS45-212ENST00000611412 EYA2O00167 538 aa14.77□□□□□ -0.05
VPS45-212ENST00000611412 SASH1O94885 1247 aa14.77□□□□□ -0.05
VPS45-212ENST00000611412 IGHMBP2P38935 993 aaKnown RBP14.77□□□□□ -0.05
VPS45-212ENST00000611412 ATG9AQ7Z3C6 839 aa14.77□□□□□ -0.05
VPS45-212ENST00000611412 ANKRD18AQ8IVF6 992 aa14.77□□□□□ -0.05
VPS45-212ENST00000611412 MPHOSPH8Q99549 860 aa14.77□□□□□ -0.05
VPS45-212ENST00000611412 COL11A2P13942 1736 aaPredicted RBP14.76□□□□□ -0.05
VPS45-212ENST00000611412 C10orf71Q711Q0 1435 aa14.76□□□□□ -0.05
VPS45-212ENST00000611412 KLRG2A4D1S0 409 aaPredicted RBP14.76□□□□□ -0.05
VPS45-212ENST00000611412 RHPN1Q8TCX5 695 aa14.76□□□□□ -0.05
VPS45-212ENST00000611412 ZNF622Q969S3 477 aaKnown RBP eCLIP14.76□□□□□ -0.051e-6■■■■□ 20.9
VPS45-212ENST00000611412 CDC5LQ99459 802 aaKnown RBP14.76□□□□□ -0.05
VPS45-212ENST00000611412 SRGNP10124 158 aa14.75□□□□□ -0.05
VPS45-212ENST00000611412 TFCP2Q12800 502 aa14.75□□□□□ -0.05
VPS45-212ENST00000611412 C16orf71Q8IYS4 520 aaPredicted RBP14.75□□□□□ -0.05
VPS45-212ENST00000611412 HELBQ8NG08 1087 aaPredicted RBP14.75□□□□□ -0.05
VPS45-212ENST00000611412 RBM17Q96I25 401 aaKnown RBP14.75□□□□□ -0.05
VPS45-212ENST00000611412 LRRCC1Q9C099 1032 aa14.75□□□□□ -0.05
VPS45-212ENST00000611412 SPON1Q9HCB6 807 aa14.75□□□□□ -0.05
VPS45-212ENST00000611412 WWC3Q9ULE0 1092 aa14.75□□□□□ -0.05
VPS45-212ENST00000611412 H0YIN7 160 aa14.75□□□□□ -0.05
VPS45-212ENST00000611412 RPS8P62241 208 aaKnown RBP14.75□□□□□ -0.05
VPS45-212ENST00000611412 NUCB1Q02818 461 aa14.75□□□□□ -0.05
VPS45-212ENST00000611412 GRAPQ13588 217 aa14.75□□□□□ -0.05
VPS45-212ENST00000611412 GRAPLQ8TC17 118 aaPredicted RBP14.75□□□□□ -0.05
VPS45-212ENST00000611412 A0A0G2JLW4 131 aa14.74□□□□□ -0.05
VPS45-212ENST00000611412 RAB11FIP3O75154 756 aa14.74□□□□□ -0.05
VPS45-212ENST00000611412 HSP90AB4PQ58FF6 505 aa14.74□□□□□ -0.05
VPS45-212ENST00000611412 CHD1LQ86WJ1 897 aa14.74□□□□□ -0.05
VPS45-212ENST00000611412 RIPOR2Q9Y4F9 1068 aa14.74□□□□□ -0.05
VPS45-212ENST00000611412 NPR1P16066 1061 aa14.73□□□□□ -0.05
VPS45-212ENST00000611412 IL15P40933 162 aaPredicted RBP14.73□□□□□ -0.05
VPS45-212ENST00000611412 METTL24Q5JXM2 366 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms