RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 LSG1Q9H089 658 aaKnown RBP8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 ANO10Q9NW15 660 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 HMG20BQ9P0W2 317 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 TPCN1Q9ULQ1 816 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 TMEM2Q9UHN6 1383 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 NEO1Q92859 1461 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 TSPOAP1O95153 1857 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 A0A0D9SFI3 127 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 GOLGA8BA8MQT2 603 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 PDIA4P13667 645 aaKnown RBP8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 IMMTQ16891 758 aaKnown RBP8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 ORAI2Q96SN7 254 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 DBNDD2Q9BQY9 259 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 NCOA5Q9HCD5 579 aaKnown RBP8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 TBX22Q9Y458 520 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 NPHP3Q7Z494 1330 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 ARHGEF10O15013 1369 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 TBC1D2BQ9UPU7 963 aa8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 MTMR7Q9Y216 660 aa8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 USP16Q9Y5T5 823 aa8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 CEP152O94986 1710 aa8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 CDK12Q9NYV4 1490 aaPredicted RBP8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 AOX1Q06278 1338 aa8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 CFAP100Q494V2 611 aa8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 MCMDC2Q4G0Z9 681 aa8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 HSP90AA4PQ58FG1 418 aa8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 TTC6Q86TZ1 520 aa8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 PIBF1Q8WXW3 757 aa8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 DDX21Q9NR30 783 aaKnown RBP eCLIP8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 TLR7Q9NYK1 1049 aaKnown RBP8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 ORC3Q9UBD5 711 aaPredicted RBP8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 MED14O60244 1454 aa8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 IGSF1Q8N6C5 1336 aa8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 ERICH2A1L162 156 aa8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 SNRPA1P09661 255 aaKnown RBP8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 RPS6KB1P23443 525 aa8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 GPTP24298 496 aa8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 NUP133Q8WUM0 1156 aa8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 SEC62Q99442 399 aaKnown RBP8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 CTNNA3Q9UI47 895 aa8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 SETBP1Q9Y6X0 1596 aa8.03□□□□□ -1.12
SYNPO2-206ENST00000610556 CYP2E1P05181 493 aaPredicted RBP8.02□□□□□ -1.12
SYNPO2-206ENST00000610556 SFPQP23246 707 aaKnown RBP eCLIP8.02□□□□□ -1.12
SYNPO2-206ENST00000610556 METTL24Q5JXM2 366 aa8.02□□□□□ -1.12
SYNPO2-206ENST00000610556 IL25Q9H293 177 aa8.02□□□□□ -1.12
SYNPO2-206ENST00000610556 ADGRB1O14514 1584 aa8.02□□□□□ -1.13
SYNPO2-206ENST00000610556 RGS12O14924 1447 aa8.02□□□□□ -1.13
SYNPO2-206ENST00000610556 HECW2Q9P2P5 1572 aa8.02□□□□□ -1.13
SYNPO2-206ENST00000610556 SKILP12757 684 aa8.02□□□□□ -1.13
SYNPO2-206ENST00000610556 OTUD7BQ6GQQ9 843 aa8.02□□□□□ -1.13
SYNPO2-206ENST00000610556 IFNL2Q8IZJ0 200 aa8.02□□□□□ -1.13
SYNPO2-206ENST00000610556 TMX1Q9H3N1 280 aa8.02□□□□□ -1.13
SYNPO2-206ENST00000610556 CBX8Q9HC52 389 aa8.02□□□□□ -1.13
SYNPO2-206ENST00000610556 PTPDC1A2A3K4 754 aa8.02□□□□□ -1.13
SYNPO2-206ENST00000610556 GIGYF1O75420 1035 aaPredicted RBP8.02□□□□□ -1.13
SYNPO2-206ENST00000610556 HMGB1P09429 215 aaKnown RBP8.02□□□□□ -1.13
SYNPO2-206ENST00000610556 LRMPQ12912 555 aa8.02□□□□□ -1.13
SYNPO2-206ENST00000610556 STX1AQ16623 288 aa8.02□□□□□ -1.13
SYNPO2-206ENST00000610556 KIF6Q6ZMV9 814 aa8.02□□□□□ -1.13
SYNPO2-206ENST00000610556 TMC6Q7Z403 805 aa8.02□□□□□ -1.13
SYNPO2-206ENST00000610556 AOPEPQ8N6M6 819 aa8.02□□□□□ -1.13
SYNPO2-206ENST00000610556 PI4K2BQ8TCG2 481 aa8.02□□□□□ -1.13
SYNPO2-206ENST00000610556 LEO1Q8WVC0 666 aaPredicted RBP8.02□□□□□ -1.13
SYNPO2-206ENST00000610556 HOOK1Q9UJC3 728 aaKnown RBP8.02□□□□□ -1.13
SYNPO2-206ENST00000610556 RIOK3O14730 519 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 CLEC17AQ6ZS10 378 aa8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 VPS37DQ86XT2 251 aa8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 SIRT1Q96EB6 747 aa8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 ZSCAN16Q9H4T2 348 aaPredicted RBP8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 USP6P35125 1406 aa8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 PTPRMP28827 1452 aa8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 PIK3C2BO00750 1634 aa8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 KLF18A0A0U1RQI7 1052 aa8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 SLC3A2P08195 630 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 MARCKSP29966 332 aaPredicted RBP8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 ZNF790Q6PG37 636 aa8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 MICU3Q86XE3 530 aa8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 JMYQ8N9B5 988 aa8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 KIF18AQ8NI77 898 aa8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 NRXN1Q9ULB1 1477 aa8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 A0A087WWV3 80 aa8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 ZNF213O14771 459 aa8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 CEP135Q66GS9 1140 aa8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 ZSWIM6Q9HCJ5 1215 aa8.01□□□□□ -1.13
SYNPO2-206ENST00000610556 ARHGAP31Q2M1Z3 1444 aa8□□□□□ -1.13
SYNPO2-206ENST00000610556 CTAGE5O15320 804 aa8□□□□□ -1.13
SYNPO2-206ENST00000610556 RXRAP19793 462 aa8□□□□□ -1.13
SYNPO2-206ENST00000610556 ZNF496Q96IT1 587 aaPredicted RBP8□□□□□ -1.13
SYNPO2-206ENST00000610556 PAG1Q9NWQ8 432 aa8□□□□□ -1.13
SYNPO2-206ENST00000610556 CWC25Q9NXE8 425 aaPredicted RBP8□□□□□ -1.13
SYNPO2-206ENST00000610556 PYCARDQ9ULZ3 195 aa8□□□□□ -1.13
SYNPO2-206ENST00000610556 ARHGEF40Q8TER5 1519 aa8□□□□□ -1.13
SYNPO2-206ENST00000610556 CPSF1Q10570 1443 aaKnown RBP8□□□□□ -1.13
SYNPO2-206ENST00000610556 ATP10DQ9P241 1426 aa8□□□□□ -1.13
SYNPO2-206ENST00000610556 A0A1B0GVL5 298 aa8□□□□□ -1.13
SYNPO2-206ENST00000610556 ERICH4A6NGS2 130 aa8□□□□□ -1.13
SYNPO2-206ENST00000610556 NR1I2O75469 434 aa8□□□□□ -1.13
SYNPO2-206ENST00000610556 TNNI3KQ59H18 835 aa8□□□□□ -1.13
SYNPO2-206ENST00000610556 MYRIPQ8NFW9 859 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms