RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 FAM200AQ8TCP9 573 aa17.37■□□□□ 0.37
CTCFL-219ENST00000608720 PRDM10Q9NQV6 1147 aa17.37■□□□□ 0.37
CTCFL-219ENST00000608720 STRCQ7RTU9 1775 aa17.37■□□□□ 0.37
CTCFL-219ENST00000608720 TAF5LO75529 589 aa17.36■□□□□ 0.37
CTCFL-219ENST00000608720 FERMT3Q86UX7 667 aa17.36■□□□□ 0.37
CTCFL-219ENST00000608720 METTL22Q9BUU2 404 aaPredicted RBP17.36■□□□□ 0.37
CTCFL-219ENST00000608720 SLIT3O75094 1523 aa17.36■□□□□ 0.37
CTCFL-219ENST00000608720 GOLGA6L4A6NEF3 574 aa17.36■□□□□ 0.37
CTCFL-219ENST00000608720 AP5Z1O43299 807 aa17.36■□□□□ 0.37
CTCFL-219ENST00000608720 ATP5JP18859 108 aa17.36■□□□□ 0.37
CTCFL-219ENST00000608720 COPRSQ9NQ92 184 aa17.36■□□□□ 0.37
CTCFL-219ENST00000608720 RGPD2P0DJD1 1756 aa17.35■□□□□ 0.37
CTCFL-219ENST00000608720 MRC1P22897 1456 aa17.35■□□□□ 0.37
CTCFL-219ENST00000608720 ZNF589Q86UQ0 364 aaPredicted RBP17.35■□□□□ 0.37
CTCFL-219ENST00000608720 ZNF710Q8N1W2 664 aa17.35■□□□□ 0.37
CTCFL-219ENST00000608720 AXIN2Q9Y2T1 843 aa17.35■□□□□ 0.37
CTCFL-219ENST00000608720 CHD2O14647 1828 aaKnown RBP17.35■□□□□ 0.37
CTCFL-219ENST00000608720 LIG1P18858 919 aa17.35■□□□□ 0.37
CTCFL-219ENST00000608720 KLHDC4Q8TBB5 520 aa17.35■□□□□ 0.37
CTCFL-219ENST00000608720 XAGE3Q8WTP9 111 aa17.35■□□□□ 0.37
CTCFL-219ENST00000608720 SPATA32Q96LK8 384 aa17.35■□□□□ 0.37
CTCFL-219ENST00000608720 DDX19AQ9NUU7 478 aaKnown RBP17.35■□□□□ 0.37
CTCFL-219ENST00000608720 NPHP3Q7Z494 1330 aa17.34■□□□□ 0.37
CTCFL-219ENST00000608720 TYRO3Q06418 890 aa17.34■□□□□ 0.37
CTCFL-219ENST00000608720 COL9A3Q14050 684 aaPredicted RBP17.34■□□□□ 0.37
CTCFL-219ENST00000608720 LMOD2Q6P5Q4 547 aa17.34■□□□□ 0.37
CTCFL-219ENST00000608720 COPS6Q7L5N1 327 aa17.34■□□□□ 0.37
CTCFL-219ENST00000608720 TCEANC2Q96MN5 208 aa17.34■□□□□ 0.37
CTCFL-219ENST00000608720 ORAI2Q96SN7 254 aa17.34■□□□□ 0.37
CTCFL-219ENST00000608720 MYD88Q99836 296 aa17.34■□□□□ 0.37
CTCFL-219ENST00000608720 SLC52A2Q9HAB3 445 aa17.34■□□□□ 0.37
CTCFL-219ENST00000608720 MYL6BP14649 208 aa17.33■□□□□ 0.37
CTCFL-219ENST00000608720 EPHA10Q5JZY3 1008 aa17.33■□□□□ 0.37
CTCFL-219ENST00000608720 PPP4R3BQ5MIZ7 849 aa17.33■□□□□ 0.37
CTCFL-219ENST00000608720 KIAA1524Q8TCG1 905 aa17.33■□□□□ 0.37
CTCFL-219ENST00000608720 NEK1Q96PY6 1258 aa17.33■□□□□ 0.37
CTCFL-219ENST00000608720 TNMDQ9H2S6 317 aa17.33■□□□□ 0.37
CTCFL-219ENST00000608720 MRVI1Q9Y6F6 885 aa17.33■□□□□ 0.37
CTCFL-219ENST00000608720 TAF6LQ9Y6J9 622 aa17.33■□□□□ 0.37
CTCFL-219ENST00000608720 RFX7Q2KHR2 1363 aa17.33■□□□□ 0.37
CTCFL-219ENST00000608720 FAM173BQ6P4H8 233 aa17.33■□□□□ 0.36
CTCFL-219ENST00000608720 LEO1Q8WVC0 666 aaPredicted RBP17.33■□□□□ 0.36
CTCFL-219ENST00000608720 U3KPZ7 1027 aaPredicted RBP17.33■□□□□ 0.36
CTCFL-219ENST00000608720 SLC39A6Q13433 755 aa17.32■□□□□ 0.36
CTCFL-219ENST00000608720 CAMK4Q16566 473 aa17.32■□□□□ 0.36
CTCFL-219ENST00000608720 TNNI3KQ59H18 835 aa17.32■□□□□ 0.36
CTCFL-219ENST00000608720 ANKRD13DQ6ZTN6 518 aa17.32■□□□□ 0.36
CTCFL-219ENST00000608720 DACT1Q9NYF0 836 aa17.32■□□□□ 0.36
CTCFL-219ENST00000608720 CHMP3Q9Y3E7 222 aa17.32■□□□□ 0.36
CTCFL-219ENST00000608720 FPGT-TNNI3KV9GXZ4 949 aa17.32■□□□□ 0.36
CTCFL-219ENST00000608720 RFX5P48382 616 aaPredicted RBP17.32■□□□□ 0.36
CTCFL-219ENST00000608720 STK3Q13188 491 aa17.32■□□□□ 0.36
CTCFL-219ENST00000608720 RBM43Q6ZSC3 357 aaKnown RBP17.32■□□□□ 0.36
CTCFL-219ENST00000608720 RAPGEF4Q8WZA2 1011 aa17.32■□□□□ 0.36
CTCFL-219ENST00000608720 GTF3C6Q969F1 213 aa17.32■□□□□ 0.36
CTCFL-219ENST00000608720 TFIP11Q9UBB9 837 aaKnown RBP17.32■□□□□ 0.36
CTCFL-219ENST00000608720 DBNLQ9UJU6 430 aaKnown RBP17.32■□□□□ 0.36
CTCFL-219ENST00000608720 KIF3AQ9Y496 699 aa17.32■□□□□ 0.36
CTCFL-219ENST00000608720 C17orf53Q8N3J3 647 aaPredicted RBP17.31■□□□□ 0.36
CTCFL-219ENST00000608720 CLSTN2Q9H4D0 955 aa17.31■□□□□ 0.36
CTCFL-219ENST00000608720 PTPN12Q05209 780 aaKnown RBP17.31■□□□□ 0.36
CTCFL-219ENST00000608720 TFCP2Q12800 502 aa17.31■□□□□ 0.36
CTCFL-219ENST00000608720 EDC3Q96F86 508 aaKnown RBP17.31■□□□□ 0.36
CTCFL-219ENST00000608720 KCNF1Q9H3M0 494 aa17.31■□□□□ 0.36
CTCFL-219ENST00000608720 CAMTA1Q9Y6Y1 1673 aa17.3■□□□□ 0.36
CTCFL-219ENST00000608720 ERBB3P21860 1342 aa17.3■□□□□ 0.36
CTCFL-219ENST00000608720 ZNF335Q9H4Z2 1342 aaPredicted RBP17.3■□□□□ 0.36
CTCFL-219ENST00000608720 COL15A1P39059 1388 aa17.3■□□□□ 0.36
CTCFL-219ENST00000608720 RABL6Q3YEC7 729 aaPredicted RBP17.3■□□□□ 0.36
CTCFL-219ENST00000608720 KRT28Q7Z3Y7 464 aa17.3■□□□□ 0.36
CTCFL-219ENST00000608720 SPC24Q8NBT2 197 aa17.3■□□□□ 0.36
CTCFL-219ENST00000608720 ZSCAN16Q9H4T2 348 aaPredicted RBP17.3■□□□□ 0.36
CTCFL-219ENST00000608720 ADAMTS7Q9UKP4 1686 aa17.3■□□□□ 0.36
CTCFL-219ENST00000608720 SNRPA1P09661 255 aaKnown RBP17.29■□□□□ 0.36
CTCFL-219ENST00000608720 MCMDC2Q4G0Z9 681 aa17.29■□□□□ 0.36
CTCFL-219ENST00000608720 NFATC2IPQ8NCF5 419 aa17.29■□□□□ 0.36
CTCFL-219ENST00000608720 SIPA1L3O60292 1781 aaPredicted RBP17.29■□□□□ 0.36
CTCFL-219ENST00000608720 PHKG2P15735 406 aa17.29■□□□□ 0.36
CTCFL-219ENST00000608720 RESTQ13127 1097 aa17.29■□□□□ 0.36
CTCFL-219ENST00000608720 Q6ZUG5 572 aa17.29■□□□□ 0.36
CTCFL-219ENST00000608720 CKAP2LQ8IYA6 745 aa17.29■□□□□ 0.36
CTCFL-219ENST00000608720 HAUS7Q99871 368 aa17.29■□□□□ 0.36
CTCFL-219ENST00000608720 CBX8Q9HC52 389 aa17.29■□□□□ 0.36
CTCFL-219ENST00000608720 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.29■□□□□ 0.36
CTCFL-219ENST00000608720 TATP17735 454 aaPredicted RBP17.28■□□□□ 0.36
CTCFL-219ENST00000608720 ANO6Q4KMQ2 910 aa17.28■□□□□ 0.36
CTCFL-219ENST00000608720 LRP10Q7Z4F1 713 aa17.28■□□□□ 0.36
CTCFL-219ENST00000608720 LUZP1Q86V48 1076 aa17.28■□□□□ 0.36
CTCFL-219ENST00000608720 CFAP45Q9UL16 551 aa17.28■□□□□ 0.36
CTCFL-219ENST00000608720 PYCARDQ9ULZ3 195 aa17.28■□□□□ 0.36
CTCFL-219ENST00000608720 H3BQV1 296 aa17.28■□□□□ 0.36
CTCFL-219ENST00000608720 JAK2O60674 1132 aa17.28■□□□□ 0.36
CTCFL-219ENST00000608720 CAVIN2O95810 425 aa17.28■□□□□ 0.36
CTCFL-219ENST00000608720 HMGB1P09429 215 aaKnown RBP17.28■□□□□ 0.36
CTCFL-219ENST00000608720 CHAF1AQ13111 956 aaPredicted RBP17.28■□□□□ 0.36
CTCFL-219ENST00000608720 IFFO2Q5TF58 517 aa17.28■□□□□ 0.36
CTCFL-219ENST00000608720 BICD2Q8TD16 824 aa17.28■□□□□ 0.36
CTCFL-219ENST00000608720 BRF1Q92994 677 aa17.28■□□□□ 0.36
CTCFL-219ENST00000608720 ZNF496Q96IT1 587 aaPredicted RBP17.28■□□□□ 0.36
CTCFL-219ENST00000608720 LLPHQ9BRT6 129 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 670.1 ms