RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 TRMT112Q9UI30 125 aaKnown RBP26.37■■□□□ 1.81
GRAMD1A-214ENST00000603907 SH3TC1Q8TE82 1336 aa26.37■■□□□ 1.81
GRAMD1A-214ENST00000603907 FAM177BA6PVY3 158 aa26.36■■□□□ 1.81
GRAMD1A-214ENST00000603907 STYK1Q6J9G0 422 aa26.36■■□□□ 1.81
GRAMD1A-214ENST00000603907 SLC4A10Q6U841 1118 aa26.36■■□□□ 1.81
GRAMD1A-214ENST00000603907 ZBTB38Q8NAP3 1195 aaPredicted RBP26.36■■□□□ 1.81
GRAMD1A-214ENST00000603907 FRAT1Q92837 279 aaPredicted RBP26.36■■□□□ 1.81
GRAMD1A-214ENST00000603907 SRCIN1Q9C0H9 1055 aa26.36■■□□□ 1.81
GRAMD1A-214ENST00000603907 SLX4Q8IY92 1834 aa26.36■■□□□ 1.81
GRAMD1A-214ENST00000603907 RIC1Q4ADV7 1423 aa26.36■■□□□ 1.81
GRAMD1A-214ENST00000603907 HSP90B1P14625 803 aaKnown RBP26.35■■□□□ 1.81
GRAMD1A-214ENST00000603907 PCCAP05165 728 aaPredicted RBP26.34■■□□□ 1.81
GRAMD1A-214ENST00000603907 CCT4P50991 539 aaKnown RBP26.34■■□□□ 1.81
GRAMD1A-214ENST00000603907 GCKRQ14397 625 aa26.34■■□□□ 1.81
GRAMD1A-214ENST00000603907 CWF19L2Q2TBE0 894 aaKnown RBP26.34■■□□□ 1.81
GRAMD1A-214ENST00000603907 SLC10A5Q5PT55 438 aa26.34■■□□□ 1.81
GRAMD1A-214ENST00000603907 PRPF40BQ6NWY9 871 aaKnown RBP26.34■■□□□ 1.81
GRAMD1A-214ENST00000603907 MASTLQ96GX5 879 aa26.34■■□□□ 1.81
GRAMD1A-214ENST00000603907 DDNO94850 711 aaPredicted RBP26.33■■□□□ 1.81
GRAMD1A-214ENST00000603907 TRIM27P14373 513 aa26.33■■□□□ 1.81
GRAMD1A-214ENST00000603907 NUTM1Q86Y26 1132 aa26.33■■□□□ 1.81
GRAMD1A-214ENST00000603907 ABCC4O15439 1325 aa26.33■■□□□ 1.81
GRAMD1A-214ENST00000603907 IQCA1LA6NCM1 817 aa26.32■■□□□ 1.8
GRAMD1A-214ENST00000603907 SRGNP10124 158 aa26.32■■□□□ 1.8
GRAMD1A-214ENST00000603907 MS4A1P11836 297 aa26.32■■□□□ 1.8
GRAMD1A-214ENST00000603907 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.32■■□□□ 1.8
GRAMD1A-214ENST00000603907 MKRN1Q9UHC7 482 aaKnown RBP26.32■■□□□ 1.8
GRAMD1A-214ENST00000603907 SCN4AP35499 1836 aa26.31■■□□□ 1.8
GRAMD1A-214ENST00000603907 KLRG2A4D1S0 409 aaPredicted RBP26.3■■□□□ 1.8
GRAMD1A-214ENST00000603907 FAM89AQ96GI7 184 aa26.3■■□□□ 1.8
GRAMD1A-214ENST00000603907 CDHR2Q9BYE9 1310 aa26.3■■□□□ 1.8
GRAMD1A-214ENST00000603907 ABCC12Q96J65 1359 aa26.3■■□□□ 1.8
GRAMD1A-214ENST00000603907 H7C1W4 665 aa26.29■■□□□ 1.8
GRAMD1A-214ENST00000603907 POTEIP0CG38 1075 aa26.29■■□□□ 1.8
GRAMD1A-214ENST00000603907 POTEJP0CG39 1038 aa26.29■■□□□ 1.8
GRAMD1A-214ENST00000603907 INTS3Q68E01 1043 aaKnown RBP26.29■■□□□ 1.8
GRAMD1A-214ENST00000603907 LDHDQ86WU2 507 aa26.28■■□□□ 1.8
GRAMD1A-214ENST00000603907 NLRP3Q96P20 1036 aa26.28■■□□□ 1.8
GRAMD1A-214ENST00000603907 GRM8O00222 908 aa26.27■■□□□ 1.8
GRAMD1A-214ENST00000603907 IRS4O14654 1257 aaPredicted RBP26.27■■□□□ 1.8
GRAMD1A-214ENST00000603907 CCDC93Q567U6 631 aa26.27■■□□□ 1.8
GRAMD1A-214ENST00000603907 FTSJ3Q8IY81 847 aaKnown RBP26.27■■□□□ 1.8
GRAMD1A-214ENST00000603907 DZIP1LQ8IYY4 767 aaKnown RBP26.27■■□□□ 1.8
GRAMD1A-214ENST00000603907 C9orf78Q9NZ63 289 aaPredicted RBP26.27■■□□□ 1.8
GRAMD1A-214ENST00000603907 CNTNAP1P78357 1384 aa26.26■■□□□ 1.79
GRAMD1A-214ENST00000603907 L3MBTL3Q96JM7 780 aaPredicted RBP26.26■■□□□ 1.79
GRAMD1A-214ENST00000603907 UTYO14607 1347 aa26.25■■□□□ 1.79
GRAMD1A-214ENST00000603907 CRY2Q49AN0 593 aa26.25■■□□□ 1.79
GRAMD1A-214ENST00000603907 NPR1P16066 1061 aa26.24■■□□□ 1.79
GRAMD1A-214ENST00000603907 CASP7P55210 303 aa26.24■■□□□ 1.79
GRAMD1A-214ENST00000603907 UBE3BQ7Z3V4 1068 aa26.24■■□□□ 1.79
GRAMD1A-214ENST00000603907 SYNE4Q8N205 404 aa26.24■■□□□ 1.79
GRAMD1A-214ENST00000603907 PLA2G12BQ9BX93 195 aa26.24■■□□□ 1.79
GRAMD1A-214ENST00000603907 TAF1DQ9H5J8 278 aaPredicted RBP26.24■■□□□ 1.79
GRAMD1A-214ENST00000603907 PASKQ96RG2 1323 aa26.23■■□□□ 1.79
GRAMD1A-214ENST00000603907 PDE8AO60658 829 aa26.23■■□□□ 1.79
GRAMD1A-214ENST00000603907 HCLS1P14317 486 aaPredicted RBP26.23■■□□□ 1.79
GRAMD1A-214ENST00000603907 RTL5Q5HYW3 569 aaPredicted RBP26.23■■□□□ 1.79
GRAMD1A-214ENST00000603907 CLUAP1Q96AJ1 413 aa26.23■■□□□ 1.79
GRAMD1A-214ENST00000603907 LAMB2P55268 1798 aa26.23■■□□□ 1.79
GRAMD1A-214ENST00000603907 FKBP4Q02790 459 aaKnown RBP eCLIP26.22■■□□□ 1.79
GRAMD1A-214ENST00000603907 C7orf43Q8WVR3 580 aa26.22■■□□□ 1.79
GRAMD1A-214ENST00000603907 AIDAQ96BJ3 306 aa26.22■■□□□ 1.79
GRAMD1A-214ENST00000603907 HDAC5Q9UQL6 1122 aa26.22■■□□□ 1.79
GRAMD1A-214ENST00000603907 PDE3AQ14432 1141 aa26.21■■□□□ 1.79
GRAMD1A-214ENST00000603907 SF3B3Q15393 1217 aaKnown RBP26.21■■□□□ 1.79
GRAMD1A-214ENST00000603907 USP44Q9H0E7 712 aa26.21■■□□□ 1.79
GRAMD1A-214ENST00000603907 TNNQ9UQP3 1299 aa26.21■■□□□ 1.79
GRAMD1A-214ENST00000603907 DDX60Q8IY21 1712 aaKnown RBP26.2■■□□□ 1.79
GRAMD1A-214ENST00000603907 TMEM88BA6NKF7 163 aa26.2■■□□□ 1.78
GRAMD1A-214ENST00000603907 FOXN1O15353 648 aa26.2■■□□□ 1.78
GRAMD1A-214ENST00000603907 EAPPQ56P03 285 aaPredicted RBP26.2■■□□□ 1.78
GRAMD1A-214ENST00000603907 TMEM57Q8N5G2 664 aa26.2■■□□□ 1.78
GRAMD1A-214ENST00000603907 HOXA10P31260 410 aaPredicted RBP26.19■■□□□ 1.78
GRAMD1A-214ENST00000603907 RTKN2Q8IZC4 609 aa26.19■■□□□ 1.78
GRAMD1A-214ENST00000603907 JARID2Q92833 1246 aaPredicted RBP26.19■■□□□ 1.78
GRAMD1A-214ENST00000603907 RPGRQ92834 1020 aaKnown RBP26.19■■□□□ 1.78
GRAMD1A-214ENST00000603907 PRDM10Q9NQV6 1147 aa26.19■■□□□ 1.78
GRAMD1A-214ENST00000603907 HACL1Q9UJ83 578 aa26.19■■□□□ 1.78
GRAMD1A-214ENST00000603907 ZNF277Q9NRM2 450 aaPredicted RBP26.18■■□□□ 1.78
GRAMD1A-214ENST00000603907 CLEC11AQ9Y240 323 aa26.18■■□□□ 1.78
GRAMD1A-214ENST00000603907 PLIN1O60240 522 aa26.17■■□□□ 1.78
GRAMD1A-214ENST00000603907 GNAI3P08754 354 aa26.17■■□□□ 1.78
GRAMD1A-214ENST00000603907 NBPF7P0C2Y1 421 aaPredicted RBP26.17■■□□□ 1.78
GRAMD1A-214ENST00000603907 RLBP1P12271 317 aa26.17■■□□□ 1.78
GRAMD1A-214ENST00000603907 ALDH1B1P30837 517 aa26.17■■□□□ 1.78
GRAMD1A-214ENST00000603907 CTCFP49711 727 aaPredicted RBP26.17■■□□□ 1.78
GRAMD1A-214ENST00000603907 RRP1P56182 461 aaKnown RBP26.17■■□□□ 1.78
GRAMD1A-214ENST00000603907 CTSWP56202 376 aa26.17■■□□□ 1.78
GRAMD1A-214ENST00000603907 RBM17Q96I25 401 aaKnown RBP26.17■■□□□ 1.78
GRAMD1A-214ENST00000603907 ZNF541Q9H0D2 1346 aa26.16■■□□□ 1.78
GRAMD1A-214ENST00000603907 CCDC152Q4G0S7 254 aa26.16■■□□□ 1.78
GRAMD1A-214ENST00000603907 C3orf67Q6ZVT6 689 aa26.16■■□□□ 1.78
GRAMD1A-214ENST00000603907 CRAMP1Q96RY5 1269 aa26.16■■□□□ 1.78
GRAMD1A-214ENST00000603907 ITGBL1O95965 494 aaPredicted RBP26.15■■□□□ 1.78
GRAMD1A-214ENST00000603907 UBTFL1P0CB47 393 aaPredicted RBP26.15■■□□□ 1.78
GRAMD1A-214ENST00000603907 EPHX2P34913 555 aa26.15■■□□□ 1.78
GRAMD1A-214ENST00000603907 VEGFBP49765 207 aa26.15■■□□□ 1.78
GRAMD1A-214ENST00000603907 PNMA8AQ86V59 439 aaPredicted RBP26.15■■□□□ 1.78
GRAMD1A-214ENST00000603907 DDX46Q7L014 1031 aaKnown RBP26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms