RNA–Protein interactions for RNA: ENST00000602710.5

UBE2E3-209, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-209ENST00000602710 ZBTB7AO95365 584 aa23.75■■□□□ 1.39
UBE2E3-209ENST00000602710 HSP90B1P14625 803 aaKnown RBP23.74■■□□□ 1.39
UBE2E3-209ENST00000602710 NRXN2Q9P2S2 1712 aa23.74■■□□□ 1.39
UBE2E3-209ENST00000602710 FAM161AQ3B820 660 aa23.74■■□□□ 1.39
UBE2E3-209ENST00000602710 RFX5P48382 616 aaPredicted RBP23.73■■□□□ 1.39
UBE2E3-209ENST00000602710 KLHDC4Q8TBB5 520 aa23.73■■□□□ 1.39
UBE2E3-209ENST00000602710 GREM2Q9H772 168 aa23.73■■□□□ 1.39
UBE2E3-209ENST00000602710 PA2G4Q9UQ80 394 aaKnown RBP23.73■■□□□ 1.39
UBE2E3-209ENST00000602710 ST5P78524 1137 aa23.72■■□□□ 1.39
UBE2E3-209ENST00000602710 CENPQQ7L2Z9 268 aaPredicted RBP23.72■■□□□ 1.39
UBE2E3-209ENST00000602710 DCTPP1Q9H773 170 aa23.72■■□□□ 1.39
UBE2E3-209ENST00000602710 TNRC6CQ9HCJ0 1690 aaKnown RBP23.72■■□□□ 1.39
UBE2E3-209ENST00000602710 NLRP3Q96P20 1036 aa23.71■■□□□ 1.39
UBE2E3-209ENST00000602710 ATF5Q9Y2D1 282 aaPredicted RBP23.71■■□□□ 1.39
UBE2E3-209ENST00000602710 EXOC6BQ9Y2D4 811 aa23.7■■□□□ 1.38
UBE2E3-209ENST00000602710 PTPN12Q05209 780 aaKnown RBP23.69■■□□□ 1.38
UBE2E3-209ENST00000602710 SF3B3Q15393 1217 aaKnown RBP23.69■■□□□ 1.38
UBE2E3-209ENST00000602710 CCDC57Q2TAC2 916 aa23.69■■□□□ 1.38
UBE2E3-209ENST00000602710 SMC5Q8IY18 1101 aa23.69■■□□□ 1.38
UBE2E3-209ENST00000602710 ZNF594Q96JF6 807 aaPredicted RBP23.69■■□□□ 1.38
UBE2E3-209ENST00000602710 MTFR1LQ9H019 292 aa23.69■■□□□ 1.38
UBE2E3-209ENST00000602710 SURF6O75683 361 aaKnown RBP23.69■■□□□ 1.38
UBE2E3-209ENST00000602710 ITGA6P23229 1130 aa23.69■■□□□ 1.38
UBE2E3-209ENST00000602710 IFIT5Q13325 482 aaKnown RBP23.69■■□□□ 1.38
UBE2E3-209ENST00000602710 CCDC152Q4G0S7 254 aa23.69■■□□□ 1.38
UBE2E3-209ENST00000602710 GCC1Q96CN9 775 aa23.68■■□□□ 1.38
UBE2E3-209ENST00000602710 SEC31BQ9NQW1 1179 aa23.68■■□□□ 1.38
UBE2E3-209ENST00000602710 ANKRD31Q8N7Z5 1873 aa23.68■■□□□ 1.38
UBE2E3-209ENST00000602710 APBB1O00213 710 aa23.67■■□□□ 1.38
UBE2E3-209ENST00000602710 RIC1Q4ADV7 1423 aa23.67■■□□□ 1.38
UBE2E3-209ENST00000602710 SIL1Q9H173 461 aa23.67■■□□□ 1.38
UBE2E3-209ENST00000602710 COPRSQ9NQ92 184 aa23.67■■□□□ 1.38
UBE2E3-209ENST00000602710 ANKRD18BA2A2Z9 1011 aa23.66■■□□□ 1.38
UBE2E3-209ENST00000602710 NOP58Q9Y2X3 529 aaKnown RBP23.66■■□□□ 1.38
UBE2E3-209ENST00000602710 TAF1P21675 1872 aa23.66■■□□□ 1.38
UBE2E3-209ENST00000602710 BRIP1Q9BX63 1249 aa23.65■■□□□ 1.38
UBE2E3-209ENST00000602710 RTL9Q8NET4 1388 aa23.65■■□□□ 1.38
UBE2E3-209ENST00000602710 COL4A1P02462 1669 aa23.64■■□□□ 1.38
UBE2E3-209ENST00000602710 TAF7LQ5H9L4 462 aa23.64■■□□□ 1.37
UBE2E3-209ENST00000602710 PUS3Q9BZE2 481 aaKnown RBP23.64■■□□□ 1.37
UBE2E3-209ENST00000602710 ANKRD45Q5TZF3 282 aa23.63■■□□□ 1.37
UBE2E3-209ENST00000602710 PDZRN3Q9UPQ7 1066 aa23.63■■□□□ 1.37
UBE2E3-209ENST00000602710 KLRG2A4D1S0 409 aaPredicted RBP23.62■■□□□ 1.37
UBE2E3-209ENST00000602710 G3BP1Q13283 466 aaKnown RBP eCLIP23.62■■□□□ 1.37
UBE2E3-209ENST00000602710 OS9Q13438 667 aaPredicted RBP23.62■■□□□ 1.37
UBE2E3-209ENST00000602710 CRY2Q49AN0 593 aa23.62■■□□□ 1.37
UBE2E3-209ENST00000602710 LRRC24Q50LG9 513 aa23.62■■□□□ 1.37
UBE2E3-209ENST00000602710 SKAP1Q86WV1 359 aa23.62■■□□□ 1.37
UBE2E3-209ENST00000602710 SMARCA5O60264 1052 aaPredicted RBP23.61■■□□□ 1.37
UBE2E3-209ENST00000602710 POLD1P28340 1107 aa23.61■■□□□ 1.37
UBE2E3-209ENST00000602710 NUCB1Q02818 461 aa23.61■■□□□ 1.37
UBE2E3-209ENST00000602710 ATG9AQ7Z3C6 839 aa23.61■■□□□ 1.37
UBE2E3-209ENST00000602710 SGIP1Q9BQI5 828 aa23.61■■□□□ 1.37
UBE2E3-209ENST00000602710 BCL11AQ9H165 835 aa23.61■■□□□ 1.37
UBE2E3-209ENST00000602710 SPEF2Q9C093 1822 aa23.6■■□□□ 1.37
UBE2E3-209ENST00000602710 EYA2O00167 538 aa23.6■■□□□ 1.37
UBE2E3-209ENST00000602710 RAB11FIP3O75154 756 aa23.6■■□□□ 1.37
UBE2E3-209ENST00000602710 SASH1O94885 1247 aa23.6■■□□□ 1.37
UBE2E3-209ENST00000602710 PDE6BP35913 854 aa23.6■■□□□ 1.37
UBE2E3-209ENST00000602710 HSP90AB4PQ58FF6 505 aa23.6■■□□□ 1.37
UBE2E3-209ENST00000602710 LDHAL6AQ6ZMR3 332 aa23.6■■□□□ 1.37
UBE2E3-209ENST00000602710 DDX46Q7L014 1031 aaKnown RBP23.6■■□□□ 1.37
UBE2E3-209ENST00000602710 RPGRQ92834 1020 aaKnown RBP23.6■■□□□ 1.37
UBE2E3-209ENST00000602710 CELF1Q92879 486 aaKnown RBP23.6■■□□□ 1.37
UBE2E3-209ENST00000602710 RHPN1Q8TCX5 695 aa23.59■■□□□ 1.37
UBE2E3-209ENST00000602710 CDC5LQ99459 802 aaKnown RBP23.59■■□□□ 1.37
UBE2E3-209ENST00000602710 LNPKQ9C0E8 428 aa23.59■■□□□ 1.37
UBE2E3-209ENST00000602710 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.59■■□□□ 1.37
UBE2E3-209ENST00000602710 PTGER2P43116 358 aa23.58■■□□□ 1.37
UBE2E3-209ENST00000602710 CHD1LQ86WJ1 897 aa23.58■■□□□ 1.37
UBE2E3-209ENST00000602710 LRRCC1Q9C099 1032 aa23.58■■□□□ 1.37
UBE2E3-209ENST00000602710 C10orf71Q711Q0 1435 aa23.58■■□□□ 1.36
UBE2E3-209ENST00000602710 COL11A2P13942 1736 aaPredicted RBP23.57■■□□□ 1.36
UBE2E3-209ENST00000602710 CIAO1O76071 339 aa23.57■■□□□ 1.36
UBE2E3-209ENST00000602710 SRGNP10124 158 aa23.57■■□□□ 1.36
UBE2E3-209ENST00000602710 ANKRD18AQ8IVF6 992 aa23.57■■□□□ 1.36
UBE2E3-209ENST00000602710 KIF1BPQ96EK5 621 aa23.57■■□□□ 1.36
UBE2E3-209ENST00000602710 IL1RAPL2Q9NP60 686 aa23.57■■□□□ 1.36
UBE2E3-209ENST00000602710 RIPOR2Q9Y4F9 1068 aa23.57■■□□□ 1.36
UBE2E3-209ENST00000602710 IGHMBP2P38935 993 aaKnown RBP23.57■■□□□ 1.36
UBE2E3-209ENST00000602710 RPS8P62241 208 aaKnown RBP23.57■■□□□ 1.36
UBE2E3-209ENST00000602710 RBM17Q96I25 401 aaKnown RBP23.57■■□□□ 1.36
UBE2E3-209ENST00000602710 MPHOSPH8Q99549 860 aa23.57■■□□□ 1.36
UBE2E3-209ENST00000602710 CNNM1Q9NRU3 951 aa23.57■■□□□ 1.36
UBE2E3-209ENST00000602710 LRP5O75197 1615 aa23.56■■□□□ 1.36
UBE2E3-209ENST00000602710 HOXA10P31260 410 aaPredicted RBP23.56■■□□□ 1.36
UBE2E3-209ENST00000602710 IL15P40933 162 aaPredicted RBP23.56■■□□□ 1.36
UBE2E3-209ENST00000602710 TFCP2Q12800 502 aa23.56■■□□□ 1.36
UBE2E3-209ENST00000602710 C2CD5Q86YS7 1000 aa23.56■■□□□ 1.36
UBE2E3-209ENST00000602710 ERC1Q8IUD2 1116 aa23.56■■□□□ 1.36
UBE2E3-209ENST00000602710 FBXO3Q9UK99 471 aa23.56■■□□□ 1.36
UBE2E3-209ENST00000602710 CHRNA5P30532 468 aa23.55■■□□□ 1.36
UBE2E3-209ENST00000602710 GRAPQ13588 217 aa23.55■■□□□ 1.36
UBE2E3-209ENST00000602710 C16orf71Q8IYS4 520 aaPredicted RBP23.55■■□□□ 1.36
UBE2E3-209ENST00000602710 GRAPLQ8TC17 118 aaPredicted RBP23.55■■□□□ 1.36
UBE2E3-209ENST00000602710 NPR1P16066 1061 aa23.54■■□□□ 1.36
UBE2E3-209ENST00000602710 H0YIN7 160 aa23.53■■□□□ 1.36
UBE2E3-209ENST00000602710 PDE4AP27815 886 aa23.53■■□□□ 1.36
UBE2E3-209ENST00000602710 CRAMP1Q96RY5 1269 aa23.53■■□□□ 1.36
UBE2E3-209ENST00000602710 BSDC1Q9NW68 430 aaPredicted RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms