RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 SLCO4C1Q6ZQN7 724 aa6.57□□□□□ -1.36
CKS1BP3-201ENST00000600888 KRT25Q7Z3Z0 450 aa6.57□□□□□ -1.36
CKS1BP3-201ENST00000600888 FCHSD1Q86WN1 690 aa6.57□□□□□ -1.36
CKS1BP3-201ENST00000600888 SVOPQ8N4V2 548 aa6.57□□□□□ -1.36
CKS1BP3-201ENST00000600888 GALNT6Q8NCL4 622 aa6.57□□□□□ -1.36
CKS1BP3-201ENST00000600888 EDEM1Q92611 657 aa6.57□□□□□ -1.36
CKS1BP3-201ENST00000600888 NUDT16Q96DE0 195 aaKnown RBP6.57□□□□□ -1.36
CKS1BP3-201ENST00000600888 FNDC3AQ9Y2H6 1198 aaKnown RBP6.57□□□□□ -1.36
CKS1BP3-201ENST00000600888 CC2D2AQ9P2K1 1620 aa6.57□□□□□ -1.36
CKS1BP3-201ENST00000600888 FZD6O60353 706 aa6.56□□□□□ -1.36
CKS1BP3-201ENST00000600888 ARHGEF15O94989 841 aa6.56□□□□□ -1.36
CKS1BP3-201ENST00000600888 PDGFAP04085 211 aa6.56□□□□□ -1.36
CKS1BP3-201ENST00000600888 EPXP11678 715 aa6.56□□□□□ -1.36
CKS1BP3-201ENST00000600888 NFKB1P19838 968 aa6.56□□□□□ -1.36
CKS1BP3-201ENST00000600888 ARHGAP4P98171 946 aa6.56□□□□□ -1.36
CKS1BP3-201ENST00000600888 MAP3K10Q02779 954 aa6.56□□□□□ -1.36
CKS1BP3-201ENST00000600888 EDARADDQ8WWZ3 215 aa6.56□□□□□ -1.36
CKS1BP3-201ENST00000600888 CCDC87Q9NVE4 849 aa6.56□□□□□ -1.36
CKS1BP3-201ENST00000600888 ZFATQ9P243 1243 aa6.56□□□□□ -1.36
CKS1BP3-201ENST00000600888 POLIQ9UNA4 740 aa6.56□□□□□ -1.36
CKS1BP3-201ENST00000600888 MAP3K6O95382 1288 aa6.55□□□□□ -1.36
CKS1BP3-201ENST00000600888 RPLP1P05386 114 aaKnown RBP6.55□□□□□ -1.36
CKS1BP3-201ENST00000600888 PCSK2P16519 638 aa6.55□□□□□ -1.36
CKS1BP3-201ENST00000600888 TNFRSF25Q93038 417 aa6.55□□□□□ -1.36
CKS1BP3-201ENST00000600888 MDFIQ99750 246 aa6.55□□□□□ -1.36
CKS1BP3-201ENST00000600888 GGNBP2Q9H3C7 697 aa6.55□□□□□ -1.36
CKS1BP3-201ENST00000600888 ELOA3CA0A087WX78 387 aaPredicted RBP6.54□□□□□ -1.36
CKS1BP3-201ENST00000600888 ELOA3DA6NLF2 546 aaPredicted RBP6.54□□□□□ -1.36
CKS1BP3-201ENST00000600888 ADARB2-AS1A8MUL3 147 aa6.54□□□□□ -1.36
CKS1BP3-201ENST00000600888 RARAP10276 462 aa6.54□□□□□ -1.36
CKS1BP3-201ENST00000600888 ELOA3BQ3SY89 546 aa6.54□□□□□ -1.36
CKS1BP3-201ENST00000600888 C8orf34Q49A92 452 aa6.54□□□□□ -1.36
CKS1BP3-201ENST00000600888 NLRP13Q86W25 1043 aa6.54□□□□□ -1.36
CKS1BP3-201ENST00000600888 ELOA3Q8NG57 546 aa6.54□□□□□ -1.36
CKS1BP3-201ENST00000600888 ENAMQ9NRM1 1142 aa6.54□□□□□ -1.36
CKS1BP3-201ENST00000600888 SHISA8B8ZZ34 492 aa6.53□□□□□ -1.36
CKS1BP3-201ENST00000600888 MMP20O60882 483 aa6.53□□□□□ -1.36
CKS1BP3-201ENST00000600888 USP5P45974 858 aa6.53□□□□□ -1.36
CKS1BP3-201ENST00000600888 TTC16Q8NEE8 873 aa6.53□□□□□ -1.36
CKS1BP3-201ENST00000600888 BTBD6Q96KE9 485 aa6.53□□□□□ -1.36
CKS1BP3-201ENST00000600888 IGFLR1Q9H665 355 aa6.53□□□□□ -1.36
CKS1BP3-201ENST00000600888 TLR7Q9NYK1 1049 aaKnown RBP6.53□□□□□ -1.36
CKS1BP3-201ENST00000600888 BIN2Q9UBW5 565 aaPredicted RBP6.53□□□□□ -1.36
CKS1BP3-201ENST00000600888 BRPF3Q9ULD4 1205 aa6.53□□□□□ -1.36
CKS1BP3-201ENST00000600888 A6NHS1 94 aa6.52□□□□□ -1.37
CKS1BP3-201ENST00000600888 ALAS2P22557 587 aa6.52□□□□□ -1.37
CKS1BP3-201ENST00000600888 TBC1D8BQ0IIM8 1120 aa6.52□□□□□ -1.37
CKS1BP3-201ENST00000600888 PDE12Q6L8Q7 609 aaKnown RBP6.52□□□□□ -1.37
CKS1BP3-201ENST00000600888 XKR5Q6UX68 686 aa6.52□□□□□ -1.37
CKS1BP3-201ENST00000600888 DHX32Q7L7V1 743 aaKnown RBP6.52□□□□□ -1.37
CKS1BP3-201ENST00000600888 NEDD1Q8NHV4 660 aa6.52□□□□□ -1.37
CKS1BP3-201ENST00000600888 UBE2OQ9C0C9 1292 aaKnown RBP6.52□□□□□ -1.37
CKS1BP3-201ENST00000600888 ELP3Q9H9T3 547 aa6.52□□□□□ -1.37
CKS1BP3-201ENST00000600888 DNAJB12Q9NXW2 375 aaKnown RBP6.52□□□□□ -1.37
CKS1BP3-201ENST00000600888 ZBTB42B2RXF5 422 aa6.51□□□□□ -1.37
CKS1BP3-201ENST00000600888 NDUFB5O43674 189 aa6.51□□□□□ -1.37
CKS1BP3-201ENST00000600888 ADH7P40394 386 aa6.51□□□□□ -1.37
CKS1BP3-201ENST00000600888 TTC39BQ5VTQ0 682 aaPredicted RBP6.51□□□□□ -1.37
CKS1BP3-201ENST00000600888 ZNF438Q7Z4V0 828 aa6.51□□□□□ -1.37
CKS1BP3-201ENST00000600888 GJD3Q8N144 294 aa6.51□□□□□ -1.37
CKS1BP3-201ENST00000600888 TMEM63CQ9P1W3 806 aa6.51□□□□□ -1.37
CKS1BP3-201ENST00000600888 ADAMTS8Q9UP79 889 aa6.51□□□□□ -1.37
CKS1BP3-201ENST00000600888 CECR2Q9BXF3 1484 aa6.51□□□□□ -1.37
CKS1BP3-201ENST00000600888 FAM181BA6NEQ2 426 aa6.5□□□□□ -1.37
CKS1BP3-201ENST00000600888 PSAPP07602 524 aa6.5□□□□□ -1.37
CKS1BP3-201ENST00000600888 AMPD1P23109 780 aa6.5□□□□□ -1.37
CKS1BP3-201ENST00000600888 EHHADHQ08426 723 aa6.5□□□□□ -1.37
CKS1BP3-201ENST00000600888 PCSK7Q16549 785 aa6.5□□□□□ -1.37
CKS1BP3-201ENST00000600888 TRPM4Q8TD43 1214 aa6.5□□□□□ -1.37
CKS1BP3-201ENST00000600888 CITED4Q96RK1 184 aa6.5□□□□□ -1.37
CKS1BP3-201ENST00000600888 ABI2Q9NYB9 513 aaPredicted RBP6.5□□□□□ -1.37
CKS1BP3-201ENST00000600888 STK17AQ9UEE5 414 aa6.5□□□□□ -1.37
CKS1BP3-201ENST00000600888 SLC6A14Q9UN76 642 aa6.5□□□□□ -1.37
CKS1BP3-201ENST00000600888 SOX18P35713 384 aa6.49□□□□□ -1.37
CKS1BP3-201ENST00000600888 NRLP54845 237 aa6.49□□□□□ -1.37
CKS1BP3-201ENST00000600888 GPLD1P80108 840 aa6.49□□□□□ -1.37
CKS1BP3-201ENST00000600888 PLAURQ03405 335 aa6.49□□□□□ -1.37
CKS1BP3-201ENST00000600888 CHSY3Q70JA7 882 aa6.49□□□□□ -1.37
CKS1BP3-201ENST00000600888 OR13H1Q8NG92 308 aa6.49□□□□□ -1.37
CKS1BP3-201ENST00000600888 CNTN3Q9P232 1028 aa6.49□□□□□ -1.37
CKS1BP3-201ENST00000600888 LOC102724428A0A0B4J2F2 783 aa6.48□□□□□ -1.37
CKS1BP3-201ENST00000600888 HOXD8P13378 290 aaPredicted RBP6.48□□□□□ -1.37
CKS1BP3-201ENST00000600888 HOXB4P17483 251 aaPredicted RBP6.48□□□□□ -1.37
CKS1BP3-201ENST00000600888 SIK1P57059 783 aa6.48□□□□□ -1.37
CKS1BP3-201ENST00000600888 MLLT1Q03111 559 aaPredicted RBP6.48□□□□□ -1.37
CKS1BP3-201ENST00000600888 PDE3BQ13370 1112 aa6.48□□□□□ -1.37
CKS1BP3-201ENST00000600888 FAM129BQ96TA1 746 aa6.48□□□□□ -1.37
CKS1BP3-201ENST00000600888 RBCK1Q9BYM8 510 aa6.48□□□□□ -1.37
CKS1BP3-201ENST00000600888 DCTN4Q9UJW0 460 aa6.48□□□□□ -1.37
CKS1BP3-201ENST00000600888 STARD13Q9Y3M8 1113 aa6.48□□□□□ -1.37
CKS1BP3-201ENST00000600888 TNFRSF21O75509 655 aa6.47□□□□□ -1.37
CKS1BP3-201ENST00000600888 CYP2E1P05181 493 aaPredicted RBP6.47□□□□□ -1.37
CKS1BP3-201ENST00000600888 CPB1P15086 417 aa6.47□□□□□ -1.37
CKS1BP3-201ENST00000600888 MARSP56192 900 aaKnown RBP6.47□□□□□ -1.37
CKS1BP3-201ENST00000600888 SNRPNP63162 240 aaKnown RBP6.47□□□□□ -1.37
CKS1BP3-201ENST00000600888 KANK3Q6NY19 840 aa6.47□□□□□ -1.37
CKS1BP3-201ENST00000600888 HFE2Q6ZVN8 426 aa6.47□□□□□ -1.37
CKS1BP3-201ENST00000600888 FAM35AQ86V20 835 aa6.47□□□□□ -1.37
CKS1BP3-201ENST00000600888 C1orf127Q8N9H9 656 aa6.47□□□□□ -1.37
CKS1BP3-201ENST00000600888 TMC1Q8TDI8 760 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms