RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 PDZRN3Q9UPQ7 1066 aa23.84■■□□□ 1.41
CCDC9-205ENST00000600117 RNF123Q5XPI4 1314 aa23.84■■□□□ 1.41
CCDC9-205ENST00000600117 FOXN1O15353 648 aa23.83■■□□□ 1.41
CCDC9-205ENST00000600117 CCT4P50991 539 aaKnown RBP23.83■■□□□ 1.41
CCDC9-205ENST00000600117 INTS3Q68E01 1043 aaKnown RBP23.83■■□□□ 1.41
CCDC9-205ENST00000600117 SYNE4Q8N205 404 aa23.83■■□□□ 1.41
CCDC9-205ENST00000600117 CCDC24Q8N4L8 307 aa23.83■■□□□ 1.41
CCDC9-205ENST00000600117 CNTNAP1P78357 1384 aa23.82■■□□□ 1.4
CCDC9-205ENST00000600117 PCCAP05165 728 aaPredicted RBP23.82■■□□□ 1.4
CCDC9-205ENST00000600117 RRP1P56182 461 aaKnown RBP23.82■■□□□ 1.4
CCDC9-205ENST00000600117 DZIP1LQ8IYY4 767 aaKnown RBP23.82■■□□□ 1.4
CCDC9-205ENST00000600117 ZBTB38Q8NAP3 1195 aaPredicted RBP23.82■■□□□ 1.4
CCDC9-205ENST00000600117 LTBP3Q9NS15 1303 aa23.82■■□□□ 1.4
CCDC9-205ENST00000600117 H7C1W4 665 aa23.81■■□□□ 1.4
CCDC9-205ENST00000600117 TMEM57Q8N5G2 664 aa23.81■■□□□ 1.4
CCDC9-205ENST00000600117 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.81■■□□□ 1.4
CCDC9-205ENST00000600117 ZNF622Q969S3 477 aaKnown RBP eCLIP23.81■■□□□ 1.4
CCDC9-205ENST00000600117 FAM89AQ96GI7 184 aa23.81■■□□□ 1.4
CCDC9-205ENST00000600117 RIC1Q4ADV7 1423 aa23.81■■□□□ 1.4
CCDC9-205ENST00000600117 SH3TC1Q8TE82 1336 aa23.81■■□□□ 1.4
CCDC9-205ENST00000600117 C21orf2O43822 256 aa23.8■■□□□ 1.4
CCDC9-205ENST00000600117 COL11A2P13942 1736 aaPredicted RBP23.8■■□□□ 1.4
CCDC9-205ENST00000600117 PDE6BP35913 854 aa23.8■■□□□ 1.4
CCDC9-205ENST00000600117 CASP7P55210 303 aa23.8■■□□□ 1.4
CCDC9-205ENST00000600117 JARID2Q92833 1246 aaPredicted RBP23.8■■□□□ 1.4
CCDC9-205ENST00000600117 BRIP1Q9BX63 1249 aa23.8■■□□□ 1.4
CCDC9-205ENST00000600117 DDX60Q8IY21 1712 aaKnown RBP23.79■■□□□ 1.4
CCDC9-205ENST00000600117 LAMB2P55268 1798 aa23.79■■□□□ 1.4
CCDC9-205ENST00000600117 POTEIP0CG38 1075 aa23.79■■□□□ 1.4
CCDC9-205ENST00000600117 POTEJP0CG39 1038 aa23.79■■□□□ 1.4
CCDC9-205ENST00000600117 ST5P78524 1137 aa23.79■■□□□ 1.4
CCDC9-205ENST00000600117 SLC10A5Q5PT55 438 aa23.79■■□□□ 1.4
CCDC9-205ENST00000600117 FTSJ3Q8IY81 847 aaKnown RBP23.79■■□□□ 1.4
CCDC9-205ENST00000600117 PANK1Q8TE04 598 aa23.79■■□□□ 1.4
CCDC9-205ENST00000600117 GRM8O00222 908 aa23.78■■□□□ 1.4
CCDC9-205ENST00000600117 GTF2E1P29083 439 aaPredicted RBP23.78■■□□□ 1.4
CCDC9-205ENST00000600117 RTL5Q5HYW3 569 aaPredicted RBP23.78■■□□□ 1.4
CCDC9-205ENST00000600117 C20orf194Q5TEA3 1177 aa23.78■■□□□ 1.4
CCDC9-205ENST00000600117 UBE3BQ7Z3V4 1068 aa23.78■■□□□ 1.4
CCDC9-205ENST00000600117 TAOK3Q9H2K8 898 aa23.78■■□□□ 1.4
CCDC9-205ENST00000600117 ZNF219Q9P2Y4 722 aaPredicted RBP23.78■■□□□ 1.4
CCDC9-205ENST00000600117 UTYO14607 1347 aa23.78■■□□□ 1.4
CCDC9-205ENST00000600117 CDHR2Q9BYE9 1310 aa23.78■■□□□ 1.4
CCDC9-205ENST00000600117 NPHP1O15259 732 aa23.77■■□□□ 1.4
CCDC9-205ENST00000600117 DDNO94850 711 aaPredicted RBP23.77■■□□□ 1.4
CCDC9-205ENST00000600117 MS4A1P11836 297 aa23.77■■□□□ 1.4
CCDC9-205ENST00000600117 CTCFP49711 727 aaPredicted RBP23.77■■□□□ 1.4
CCDC9-205ENST00000600117 PDE3AQ14432 1141 aa23.77■■□□□ 1.4
CCDC9-205ENST00000600117 USP44Q9H0E7 712 aa23.77■■□□□ 1.4
CCDC9-205ENST00000600117 PASKQ96RG2 1323 aa23.77■■□□□ 1.4
CCDC9-205ENST00000600117 SCN4AP35499 1836 aa23.77■■□□□ 1.4
CCDC9-205ENST00000600117 HCLS1P14317 486 aaPredicted RBP23.76■■□□□ 1.39
CCDC9-205ENST00000600117 AIDAQ96BJ3 306 aa23.76■■□□□ 1.39
CCDC9-205ENST00000600117 IQCA1LA6NCM1 817 aa23.75■■□□□ 1.39
CCDC9-205ENST00000600117 IRS4O14654 1257 aaPredicted RBP23.75■■□□□ 1.39
CCDC9-205ENST00000600117 SLC34A2O95436 690 aa23.75■■□□□ 1.39
CCDC9-205ENST00000600117 NBPF7P0C2Y1 421 aaPredicted RBP23.75■■□□□ 1.39
CCDC9-205ENST00000600117 C3orf67Q6ZVT6 689 aa23.75■■□□□ 1.39
CCDC9-205ENST00000600117 LDHDQ86WU2 507 aa23.75■■□□□ 1.39
CCDC9-205ENST00000600117 C9orf78Q9NZ63 289 aaPredicted RBP23.75■■□□□ 1.39
CCDC9-205ENST00000600117 SUPT16HQ9Y5B9 1047 aaKnown RBP23.75■■□□□ 1.39
CCDC9-205ENST00000600117 SLX4Q8IY92 1834 aa23.75■■□□□ 1.39
CCDC9-205ENST00000600117 CACNA1SQ13698 1873 aa23.75■■□□□ 1.39
CCDC9-205ENST00000600117 KLRG2A4D1S0 409 aaPredicted RBP23.74■■□□□ 1.39
CCDC9-205ENST00000600117 MEIS3Q99687 375 aa23.73■■□□□ 1.39
CCDC9-205ENST00000600117 VEGFBP49765 207 aa23.72■■□□□ 1.39
CCDC9-205ENST00000600117 SOGA3Q5TF21 947 aa23.72■■□□□ 1.39
CCDC9-205ENST00000600117 ITPRIPQ8IWB1 547 aa23.72■■□□□ 1.39
CCDC9-205ENST00000600117 CNKSR1Q969H4 720 aa23.72■■□□□ 1.39
CCDC9-205ENST00000600117 L3MBTL3Q96JM7 780 aaPredicted RBP23.72■■□□□ 1.39
CCDC9-205ENST00000600117 PLA2G12BQ9BX93 195 aa23.72■■□□□ 1.39
CCDC9-205ENST00000600117 TMEM88BA6NKF7 163 aa23.71■■□□□ 1.39
CCDC9-205ENST00000600117 PDE8AO60658 829 aa23.71■■□□□ 1.39
CCDC9-205ENST00000600117 MVPQ14764 893 aaKnown RBP23.71■■□□□ 1.39
CCDC9-205ENST00000600117 CRY2Q49AN0 593 aa23.71■■□□□ 1.39
CCDC9-205ENST00000600117 TAF1DQ9H5J8 278 aaPredicted RBP23.71■■□□□ 1.39
CCDC9-205ENST00000600117 COG6Q9Y2V7 657 aa23.71■■□□□ 1.39
CCDC9-205ENST00000600117 CENPBP07199 599 aaPredicted RBP23.7■■□□□ 1.38
CCDC9-205ENST00000600117 STYK1Q6J9G0 422 aa23.7■■□□□ 1.38
CCDC9-205ENST00000600117 KAZALD1Q96I82 304 aa23.7■■□□□ 1.38
CCDC9-205ENST00000600117 SUCLG2Q96I99 432 aa23.7■■□□□ 1.38
CCDC9-205ENST00000600117 NLRP3Q96P20 1036 aa23.7■■□□□ 1.38
CCDC9-205ENST00000600117 WBP1LQ9NX94 342 aa23.7■■□□□ 1.38
CCDC9-205ENST00000600117 MYH3P11055 1940 aa23.7■■□□□ 1.38
CCDC9-205ENST00000600117 ZBTB7BO15156 539 aaPredicted RBP23.69■■□□□ 1.38
CCDC9-205ENST00000600117 EPHA10Q5JZY3 1008 aa23.69■■□□□ 1.38
CCDC9-205ENST00000600117 PRPF40BQ6NWY9 871 aaKnown RBP23.69■■□□□ 1.38
CCDC9-205ENST00000600117 ITGBL1O95965 494 aaPredicted RBP23.68■■□□□ 1.38
CCDC9-205ENST00000600117 SRGNP10124 158 aa23.68■■□□□ 1.38
CCDC9-205ENST00000600117 HSP90B1P14625 803 aaKnown RBP23.68■■□□□ 1.38
CCDC9-205ENST00000600117 FOXO4P98177 505 aa23.68■■□□□ 1.38
CCDC9-205ENST00000600117 SF3B3Q15393 1217 aaKnown RBP23.68■■□□□ 1.38
CCDC9-205ENST00000600117 GNAI3P08754 354 aa23.67■■□□□ 1.38
CCDC9-205ENST00000600117 UBTFL1P0CB47 393 aaPredicted RBP23.67■■□□□ 1.38
CCDC9-205ENST00000600117 LBX1P52954 281 aa23.67■■□□□ 1.38
CCDC9-205ENST00000600117 CTSWP56202 376 aa23.67■■□□□ 1.38
CCDC9-205ENST00000600117 TTLL11Q8NHH1 800 aa23.66■■□□□ 1.38
CCDC9-205ENST00000600117 MASTLQ96GX5 879 aa23.66■■□□□ 1.38
CCDC9-205ENST00000600117 DDX19BQ9UMR2 479 aa23.66■■□□□ 1.38
CCDC9-205ENST00000600117 CSF1RP07333 972 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms