RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 EXOSC9Q06265 439 aaKnown RBP11.89□□□□□ -0.51
FARP1-226ENST00000599040 KRT24Q2M2I5 525 aa11.89□□□□□ -0.51
FARP1-226ENST00000599040 NIM1KQ8IY84 436 aa11.89□□□□□ -0.51
FARP1-226ENST00000599040 JMYQ8N9B5 988 aa11.89□□□□□ -0.51
FARP1-226ENST00000599040 TSR2Q969E8 191 aaKnown RBP11.89□□□□□ -0.51
FARP1-226ENST00000599040 MBIPQ9NS73 344 aa11.89□□□□□ -0.51
FARP1-226ENST00000599040 ATP6V0A2Q9Y487 856 aa11.89□□□□□ -0.51
FARP1-226ENST00000599040 ABCC4O15439 1325 aa11.88□□□□□ -0.51
FARP1-226ENST00000599040 TCERG1O14776 1098 aaKnown RBP11.88□□□□□ -0.51
FARP1-226ENST00000599040 EPHX2P34913 555 aa11.88□□□□□ -0.51
FARP1-226ENST00000599040 ALDH1L2Q3SY69 923 aa11.88□□□□□ -0.51
FARP1-226ENST00000599040 EAPPQ56P03 285 aaPredicted RBP11.88□□□□□ -0.51
FARP1-226ENST00000599040 IPO8O15397 1037 aaKnown RBP11.87□□□□□ -0.51
FARP1-226ENST00000599040 PPIP5K2O43314 1243 aa11.87□□□□□ -0.51
FARP1-226ENST00000599040 ZNF853P0CG23 659 aa11.87□□□□□ -0.51
FARP1-226ENST00000599040 HCLS1P14317 486 aaPredicted RBP11.87□□□□□ -0.51
FARP1-226ENST00000599040 GRAPQ13588 217 aa11.87□□□□□ -0.51
FARP1-226ENST00000599040 IFFO2Q5TF58 517 aa11.87□□□□□ -0.51
FARP1-226ENST00000599040 DPP8Q6V1X1 898 aaPredicted RBP11.87□□□□□ -0.51
FARP1-226ENST00000599040 C3orf67Q6ZVT6 689 aa11.87□□□□□ -0.51
FARP1-226ENST00000599040 RIC3Q7Z5B4 369 aa11.87□□□□□ -0.51
FARP1-226ENST00000599040 SP8Q8IXZ3 490 aa11.87□□□□□ -0.51
FARP1-226ENST00000599040 GRAPLQ8TC17 118 aaPredicted RBP11.87□□□□□ -0.51
FARP1-226ENST00000599040 CREBZFQ9NS37 354 aa11.87□□□□□ -0.51
FARP1-226ENST00000599040 SMC4Q9NTJ3 1288 aa11.87□□□□□ -0.51
FARP1-226ENST00000599040 PPP4R2Q9NY27 417 aa11.87□□□□□ -0.51
FARP1-226ENST00000599040 CLEC11AQ9Y240 323 aa11.87□□□□□ -0.51
FARP1-226ENST00000599040 GJA3Q9Y6H8 435 aa11.87□□□□□ -0.51
FARP1-226ENST00000599040 LAMB2P55268 1798 aa11.87□□□□□ -0.51
FARP1-226ENST00000599040 KIF16BQ96L93 1317 aa11.86□□□□□ -0.51
FARP1-226ENST00000599040 DDX58O95786 925 aaKnown RBP11.86□□□□□ -0.51
FARP1-226ENST00000599040 RARSP54136 660 aaKnown RBP11.86□□□□□ -0.51
FARP1-226ENST00000599040 IRX6P78412 446 aaPredicted RBP11.86□□□□□ -0.51
FARP1-226ENST00000599040 MPNDQ8N594 471 aa11.86□□□□□ -0.51
FARP1-226ENST00000599040 ISCA1Q9BUE6 129 aa11.86□□□□□ -0.51
FARP1-226ENST00000599040 TRIM28Q13263 835 aaKnown RBP11.85□□□□□ -0.51
FARP1-226ENST00000599040 TWISTNBQ3B726 338 aaPredicted RBP11.85□□□□□ -0.51
FARP1-226ENST00000599040 CCDC30Q5VVM6 783 aa11.85□□□□□ -0.51
FARP1-226ENST00000599040 RTFDC1Q9BY42 306 aaPredicted RBP11.85□□□□□ -0.51
FARP1-226ENST00000599040 ATP5J2-PTCD1G3V325 749 aa11.84□□□□□ -0.51
FARP1-226ENST00000599040 POTEIP0CG38 1075 aa11.84□□□□□ -0.51
FARP1-226ENST00000599040 POTEJP0CG39 1038 aa11.84□□□□□ -0.51
FARP1-226ENST00000599040 PDE3AQ14432 1141 aa11.84□□□□□ -0.51
FARP1-226ENST00000599040 AOC3Q16853 763 aa11.84□□□□□ -0.51
FARP1-226ENST00000599040 FRAT1Q92837 279 aaPredicted RBP11.84□□□□□ -0.51
FARP1-226ENST00000599040 ZNRF3Q9ULT6 936 aa11.84□□□□□ -0.51
FARP1-226ENST00000599040 PASKQ96RG2 1323 aa11.84□□□□□ -0.51
FARP1-226ENST00000599040 DDX60Q8IY21 1712 aaKnown RBP11.83□□□□□ -0.52
FARP1-226ENST00000599040 TMEM88BA6NKF7 163 aa11.83□□□□□ -0.52
FARP1-226ENST00000599040 IRS4O14654 1257 aaPredicted RBP11.83□□□□□ -0.52
FARP1-226ENST00000599040 AAMPQ13685 434 aa11.83□□□□□ -0.52
FARP1-226ENST00000599040 SF3B3Q15393 1217 aaKnown RBP11.83□□□□□ -0.52
FARP1-226ENST00000599040 ZKSCAN2Q63HK3 967 aa11.83□□□□□ -0.52
FARP1-226ENST00000599040 USP50Q70EL3 339 aaPredicted RBP11.83□□□□□ -0.52
FARP1-226ENST00000599040 FTSJ3Q8IY81 847 aaKnown RBP11.83□□□□□ -0.52
FARP1-226ENST00000599040 FAM89AQ96GI7 184 aa11.83□□□□□ -0.52
FARP1-226ENST00000599040 STK31Q9BXU1 1019 aa11.83□□□□□ -0.52
FARP1-226ENST00000599040 CHMP4BQ9H444 224 aaKnown RBP11.83□□□□□ -0.52
FARP1-226ENST00000599040 CDHR2Q9BYE9 1310 aa11.83□□□□□ -0.52
FARP1-226ENST00000599040 ADAMTSL1Q8N6G6 1762 aa11.82□□□□□ -0.52
FARP1-226ENST00000599040 COL4A5P29400 1685 aa11.82□□□□□ -0.52
FARP1-226ENST00000599040 ELL2O00472 640 aaPredicted RBP11.82□□□□□ -0.52
FARP1-226ENST00000599040 BCAR3O75815 825 aa11.82□□□□□ -0.52
FARP1-226ENST00000599040 KIAA2012Q0VF49 1180 aa11.82□□□□□ -0.52
FARP1-226ENST00000599040 TNIP1Q15025 636 aa11.82□□□□□ -0.52
FARP1-226ENST00000599040 CNTROBQ8N137 903 aa11.82□□□□□ -0.52
FARP1-226ENST00000599040 ZBTB38Q8NAP3 1195 aaPredicted RBP11.82□□□□□ -0.52
FARP1-226ENST00000599040 CCDC191Q8NCU4 936 aa11.82□□□□□ -0.52
FARP1-226ENST00000599040 LRRC37AA6NMS7 1700 aa11.81□□□□□ -0.52
FARP1-226ENST00000599040 SCNN1DP51172 638 aa11.81□□□□□ -0.52
FARP1-226ENST00000599040 NEXNQ0ZGT2 675 aa11.81□□□□□ -0.52
FARP1-226ENST00000599040 CIAPIN1Q6FI81 312 aa11.81□□□□□ -0.52
FARP1-226ENST00000599040 C8orf58Q8NAV2 365 aa11.81□□□□□ -0.52
FARP1-226ENST00000599040 CCDC136Q96JN2 1154 aa11.81□□□□□ -0.52
FARP1-226ENST00000599040 EYA3Q99504 573 aa11.81□□□□□ -0.52
FARP1-226ENST00000599040 MYD88Q99836 296 aa11.81□□□□□ -0.52
FARP1-226ENST00000599040 PHAXQ9H814 394 aaKnown RBP11.81□□□□□ -0.52
FARP1-226ENST00000599040 ADARB2Q9NS39 739 aaKnown RBP11.81□□□□□ -0.52
FARP1-226ENST00000599040 CWC25Q9NXE8 425 aaPredicted RBP11.81□□□□□ -0.52
FARP1-226ENST00000599040 CNTNAP1P78357 1384 aa11.8□□□□□ -0.52
FARP1-226ENST00000599040 PLIN1O60240 522 aa11.8□□□□□ -0.52
FARP1-226ENST00000599040 VAMP4O75379 141 aa11.8□□□□□ -0.52
FARP1-226ENST00000599040 ITGBL1O95965 494 aaPredicted RBP11.8□□□□□ -0.52
FARP1-226ENST00000599040 PCCAP05165 728 aaPredicted RBP11.8□□□□□ -0.52
FARP1-226ENST00000599040 WASHC4Q2M389 1173 aa11.8□□□□□ -0.52
FARP1-226ENST00000599040 CCDC152Q4G0S7 254 aa11.8□□□□□ -0.52
FARP1-226ENST00000599040 RTL5Q5HYW3 569 aaPredicted RBP11.8□□□□□ -0.52
FARP1-226ENST00000599040 MAP1SQ66K74 1059 aaPredicted RBP11.8□□□□□ -0.52
FARP1-226ENST00000599040 BCL2L13Q9BXK5 485 aa11.8□□□□□ -0.52
FARP1-226ENST00000599040 GPRC5DQ9NZD1 345 aa11.8□□□□□ -0.52
FARP1-226ENST00000599040 MKRN1Q9UHC7 482 aaKnown RBP11.8□□□□□ -0.52
FARP1-226ENST00000599040 NSFL1CQ9UNZ2 370 aaKnown RBP11.8□□□□□ -0.52
FARP1-226ENST00000599040 TAF1P21675 1872 aa11.79□□□□□ -0.52
FARP1-226ENST00000599040 C6orf229H3BNL8 230 aa11.79□□□□□ -0.52
FARP1-226ENST00000599040 HSPA1AP0DMV8 641 aaKnown RBP11.79□□□□□ -0.52
FARP1-226ENST00000599040 HSPA1BP0DMV9 641 aaKnown RBP11.79□□□□□ -0.52
FARP1-226ENST00000599040 EPS15P42566 896 aa11.79□□□□□ -0.52
FARP1-226ENST00000599040 BRPF1P55201 1214 aaPredicted RBP11.79□□□□□ -0.52
FARP1-226ENST00000599040 RPS8P62241 208 aaKnown RBP11.79□□□□□ -0.52
FARP1-226ENST00000599040 CXCL9Q07325 125 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms