RNA–Protein interactions for RNA: ENST00000598165.5

XRCC1-207, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-207ENST00000598165 CCDC152Q4G0S7 254 aa17.83■□□□□ 0.44
XRCC1-207ENST00000598165 ZKSCAN2Q63HK3 967 aa17.83■□□□□ 0.44
XRCC1-207ENST00000598165 ATF7IPQ6VMQ6 1270 aa17.83■□□□□ 0.44
XRCC1-207ENST00000598165 ABCC4O15439 1325 aa17.82■□□□□ 0.44
XRCC1-207ENST00000598165 SOGA3Q5TF21 947 aa17.82■□□□□ 0.44
XRCC1-207ENST00000598165 RCAN3Q9UKA8 241 aa17.82■□□□□ 0.44
XRCC1-207ENST00000598165 ARFGEF1Q9Y6D6 1849 aa17.82■□□□□ 0.44
XRCC1-207ENST00000598165 LAMB2P55268 1798 aa17.81■□□□□ 0.44
XRCC1-207ENST00000598165 TRIM27P14373 513 aa17.81■□□□□ 0.44
XRCC1-207ENST00000598165 CTSWP56202 376 aa17.81■□□□□ 0.44
XRCC1-207ENST00000598165 GRAPQ13588 217 aa17.81■□□□□ 0.44
XRCC1-207ENST00000598165 GRAPLQ8TC17 118 aaPredicted RBP17.81■□□□□ 0.44
XRCC1-207ENST00000598165 PLA2G12BQ9BX93 195 aa17.81■□□□□ 0.44
XRCC1-207ENST00000598165 SLX4Q8IY92 1834 aa17.8■□□□□ 0.44
XRCC1-207ENST00000598165 PPEF1O14829 653 aaPredicted RBP17.8■□□□□ 0.44
XRCC1-207ENST00000598165 BBOX1O75936 387 aa17.8■□□□□ 0.44
XRCC1-207ENST00000598165 C7orf43Q8WVR3 580 aa17.8■□□□□ 0.44
XRCC1-207ENST00000598165 CCDC85AQ96PX6 553 aaPredicted RBP17.8■□□□□ 0.44
XRCC1-207ENST00000598165 NBPF7P0C2Y1 421 aaPredicted RBP17.79■□□□□ 0.44
XRCC1-207ENST00000598165 CCDC93Q567U6 631 aa17.79■□□□□ 0.44
XRCC1-207ENST00000598165 TTLL11Q8NHH1 800 aa17.79■□□□□ 0.44
XRCC1-207ENST00000598165 CLUAP1Q96AJ1 413 aa17.79■□□□□ 0.44
XRCC1-207ENST00000598165 TMX4Q9H1E5 349 aaPredicted RBP17.79■□□□□ 0.44
XRCC1-207ENST00000598165 UTYO14607 1347 aa17.78■□□□□ 0.44
XRCC1-207ENST00000598165 INTS3Q68E01 1043 aaKnown RBP17.78■□□□□ 0.44
XRCC1-207ENST00000598165 CC2D2BQ6DHV5 1058 aa17.78■□□□□ 0.44
XRCC1-207ENST00000598165 CELF1Q92879 486 aaKnown RBP17.78■□□□□ 0.44
XRCC1-207ENST00000598165 TNNQ9UQP3 1299 aa17.78■□□□□ 0.44
XRCC1-207ENST00000598165 CACNA1SQ13698 1873 aa17.78■□□□□ 0.44
XRCC1-207ENST00000598165 OLFM4Q6UX06 510 aa17.77■□□□□ 0.44
XRCC1-207ENST00000598165 TMC4Q7Z404 712 aa17.77■□□□□ 0.44
XRCC1-207ENST00000598165 FTSJ3Q8IY81 847 aaKnown RBP17.77■□□□□ 0.44
XRCC1-207ENST00000598165 USP44Q9H0E7 712 aa17.77■□□□□ 0.44
XRCC1-207ENST00000598165 GREM2Q9H772 168 aa17.77■□□□□ 0.44
XRCC1-207ENST00000598165 SEC31BQ9NQW1 1179 aa17.77■□□□□ 0.44
XRCC1-207ENST00000598165 CSF1RP07333 972 aa17.76■□□□□ 0.43
XRCC1-207ENST00000598165 RPS8P62241 208 aaKnown RBP17.76■□□□□ 0.43
XRCC1-207ENST00000598165 FOXO4P98177 505 aa17.76■□□□□ 0.43
XRCC1-207ENST00000598165 RTKN2Q8IZC4 609 aa17.76■□□□□ 0.43
XRCC1-207ENST00000598165 SUCLG2Q96I99 432 aa17.76■□□□□ 0.43
XRCC1-207ENST00000598165 ATP6V0A2Q9Y487 856 aa17.76■□□□□ 0.43
XRCC1-207ENST00000598165 RTL9Q8NET4 1388 aa17.76■□□□□ 0.43
XRCC1-207ENST00000598165 NFKBIEO00221 500 aa17.75■□□□□ 0.43
XRCC1-207ENST00000598165 RASSF7Q02833 373 aa17.75■□□□□ 0.43
XRCC1-207ENST00000598165 GRIPAP1Q4V328 841 aa17.75■□□□□ 0.43
XRCC1-207ENST00000598165 SP8Q8IXZ3 490 aa17.75■□□□□ 0.43
XRCC1-207ENST00000598165 DZIP1LQ8IYY4 767 aaKnown RBP17.75■□□□□ 0.43
XRCC1-207ENST00000598165 CDC5LQ99459 802 aaKnown RBP17.75■□□□□ 0.43
XRCC1-207ENST00000598165 TAOK3Q9H2K8 898 aa17.75■□□□□ 0.43
XRCC1-207ENST00000598165 CHMP3Q9Y3E7 222 aa17.75■□□□□ 0.43
XRCC1-207ENST00000598165 UBTFL1P0CB47 393 aaPredicted RBP17.74■□□□□ 0.43
XRCC1-207ENST00000598165 ITGA6P23229 1130 aa17.74■□□□□ 0.43
XRCC1-207ENST00000598165 FAM161AQ3B820 660 aa17.74■□□□□ 0.43
XRCC1-207ENST00000598165 EPHA10Q5JZY3 1008 aa17.74■□□□□ 0.43
XRCC1-207ENST00000598165 LMBR1LQ6UX01 489 aa17.74■□□□□ 0.43
XRCC1-207ENST00000598165 ANKRD18AQ8IVF6 992 aa17.74■□□□□ 0.43
XRCC1-207ENST00000598165 TMEM57Q8N5G2 664 aa17.74■□□□□ 0.43
XRCC1-207ENST00000598165 MYH3P11055 1940 aa17.73■□□□□ 0.43
XRCC1-207ENST00000598165 MS4A1P11836 297 aa17.73■□□□□ 0.43
XRCC1-207ENST00000598165 FKBP4Q02790 459 aaKnown RBP eCLIP17.73■□□□□ 0.43
XRCC1-207ENST00000598165 KAZALD1Q96I82 304 aa17.73■□□□□ 0.43
XRCC1-207ENST00000598165 HDAC5Q9UQL6 1122 aa17.73■□□□□ 0.43
XRCC1-207ENST00000598165 LTBP3Q9NS15 1303 aa17.72■□□□□ 0.43
XRCC1-207ENST00000598165 ANKRD18BA2A2Z9 1011 aa17.72■□□□□ 0.43
XRCC1-207ENST00000598165 LMNB1P20700 586 aa17.72■□□□□ 0.43
XRCC1-207ENST00000598165 IFIT5Q13325 482 aaKnown RBP17.72■□□□□ 0.43
XRCC1-207ENST00000598165 C9orf131Q5VYM1 1079 aa17.72■□□□□ 0.43
XRCC1-207ENST00000598165 SLC51AQ86UW1 340 aa17.72■□□□□ 0.43
XRCC1-207ENST00000598165 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.72■□□□□ 0.43
XRCC1-207ENST00000598165 MEIS3Q99687 375 aa17.72■□□□□ 0.43
XRCC1-207ENST00000598165 BICC1Q9H694 974 aaKnown RBP17.72■□□□□ 0.43
XRCC1-207ENST00000598165 NMRK2Q9NPI5 230 aa17.72■□□□□ 0.43
XRCC1-207ENST00000598165 TAF1P21675 1872 aa17.71■□□□□ 0.43
XRCC1-207ENST00000598165 GNAI3P08754 354 aa17.71■□□□□ 0.43
XRCC1-207ENST00000598165 RLBP1P12271 317 aa17.71■□□□□ 0.43
XRCC1-207ENST00000598165 IGHMBP2P38935 993 aaKnown RBP17.71■□□□□ 0.43
XRCC1-207ENST00000598165 APLP1P51693 650 aa17.71■□□□□ 0.43
XRCC1-207ENST00000598165 CCDC57Q2TAC2 916 aa17.71■□□□□ 0.43
XRCC1-207ENST00000598165 PSMD1Q99460 953 aa17.71■□□□□ 0.43
XRCC1-207ENST00000598165 RNF181Q9P0P0 153 aa17.71■□□□□ 0.43
XRCC1-207ENST00000598165 FER1L6Q2WGJ9 1857 aa17.7■□□□□ 0.42
XRCC1-207ENST00000598165 PLIN1O60240 522 aa17.7■□□□□ 0.42
XRCC1-207ENST00000598165 TOMM70O94826 608 aa17.7■□□□□ 0.42
XRCC1-207ENST00000598165 RABL6Q3YEC7 729 aaPredicted RBP17.7■□□□□ 0.42
XRCC1-207ENST00000598165 DPP8Q6V1X1 898 aaPredicted RBP17.7■□□□□ 0.42
XRCC1-207ENST00000598165 ITPRIPQ8IWB1 547 aa17.7■□□□□ 0.42
XRCC1-207ENST00000598165 MPNDQ8N594 471 aa17.7■□□□□ 0.42
XRCC1-207ENST00000598165 SNED1Q8TER0 1413 aa17.7■□□□□ 0.42
XRCC1-207ENST00000598165 COL4A1P02462 1669 aa17.7■□□□□ 0.42
XRCC1-207ENST00000598165 PRELPP51888 382 aa17.69■□□□□ 0.42
XRCC1-207ENST00000598165 TAF7LQ5H9L4 462 aa17.69■□□□□ 0.42
XRCC1-207ENST00000598165 ANKRD44Q8N8A2 993 aa17.69■□□□□ 0.42
XRCC1-207ENST00000598165 PANK1Q8TE04 598 aa17.69■□□□□ 0.42
XRCC1-207ENST00000598165 MPHOSPH8Q99549 860 aa17.69■□□□□ 0.42
XRCC1-207ENST00000598165 ZNF277Q9NRM2 450 aaPredicted RBP17.69■□□□□ 0.42
XRCC1-207ENST00000598165 BSDC1Q9NW68 430 aaPredicted RBP17.69■□□□□ 0.42
XRCC1-207ENST00000598165 NSFL1CQ9UNZ2 370 aaKnown RBP17.69■□□□□ 0.42
XRCC1-207ENST00000598165 SUPT20HQ8NEM7 779 aa17.68■□□□□ 0.42
XRCC1-207ENST00000598165 LRRFIP2Q9Y608 721 aaKnown RBP17.68■□□□□ 0.42
XRCC1-207ENST00000598165 IARSP41252 1262 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms