RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 MKRN1Q9UHC7 482 aaKnown RBP19.66■□□□□ 0.74
TGFB1-202ENST00000597453 SCNN1DP51172 638 aa19.65■□□□□ 0.74
TGFB1-202ENST00000597453 PHAXQ9H814 394 aaKnown RBP19.65■□□□□ 0.74
TGFB1-202ENST00000597453 CALD1Q05682 793 aaKnown RBP19.64■□□□□ 0.73
TGFB1-202ENST00000597453 MAP1SQ66K74 1059 aaPredicted RBP19.64■□□□□ 0.73
TGFB1-202ENST00000597453 DPP8Q6V1X1 898 aaPredicted RBP19.64■□□□□ 0.73
TGFB1-202ENST00000597453 MPNDQ8N594 471 aa19.64■□□□□ 0.73
TGFB1-202ENST00000597453 C8orf58Q8NAV2 365 aa19.64■□□□□ 0.73
TGFB1-202ENST00000597453 HSPA1AP0DMV8 641 aaKnown RBP19.63■□□□□ 0.73
TGFB1-202ENST00000597453 HSPA1BP0DMV9 641 aaKnown RBP19.63■□□□□ 0.73
TGFB1-202ENST00000597453 EPS15P42566 896 aa19.63■□□□□ 0.73
TGFB1-202ENST00000597453 RTL5Q5HYW3 569 aaPredicted RBP19.63■□□□□ 0.73
TGFB1-202ENST00000597453 SUPT20HQ8NEM7 779 aa19.63■□□□□ 0.73
TGFB1-202ENST00000597453 VPS33BQ9H267 617 aa19.63■□□□□ 0.73
TGFB1-202ENST00000597453 LMOD1P29536 600 aaPredicted RBP19.62■□□□□ 0.73
TGFB1-202ENST00000597453 TRIM28Q13263 835 aaKnown RBP19.62■□□□□ 0.73
TGFB1-202ENST00000597453 COL13A1Q5TAT6 717 aaPredicted RBP19.62■□□□□ 0.73
TGFB1-202ENST00000597453 CNTROBQ8N137 903 aa19.62■□□□□ 0.73
TGFB1-202ENST00000597453 CELF1Q92879 486 aaKnown RBP19.62■□□□□ 0.73
TGFB1-202ENST00000597453 CNTNAP1P78357 1384 aa19.61■□□□□ 0.73
TGFB1-202ENST00000597453 TMEM88BA6NKF7 163 aa19.61■□□□□ 0.73
TGFB1-202ENST00000597453 GOLGA2Q08379 1002 aa19.61■□□□□ 0.73
TGFB1-202ENST00000597453 SF3B3Q15393 1217 aaKnown RBP19.61■□□□□ 0.73
TGFB1-202ENST00000597453 RIC3Q7Z5B4 369 aa19.61■□□□□ 0.73
TGFB1-202ENST00000597453 ZNRF3Q9ULT6 936 aa19.61■□□□□ 0.73
TGFB1-202ENST00000597453 CXCL9Q07325 125 aa19.6■□□□□ 0.73
TGFB1-202ENST00000597453 KIAA2012Q0VF49 1180 aa19.6■□□□□ 0.73
TGFB1-202ENST00000597453 IRS4O14654 1257 aaPredicted RBP19.59■□□□□ 0.73
TGFB1-202ENST00000597453 TMC4Q7Z404 712 aa19.59■□□□□ 0.73
TGFB1-202ENST00000597453 TSPYL6Q8N831 410 aa19.59■□□□□ 0.73
TGFB1-202ENST00000597453 MYD88Q99836 296 aa19.59■□□□□ 0.73
TGFB1-202ENST00000597453 TSR2Q969E8 191 aaKnown RBP19.58■□□□□ 0.72
TGFB1-202ENST00000597453 GPRC5DQ9NZD1 345 aa19.58■□□□□ 0.72
TGFB1-202ENST00000597453 TRPM7Q96QT4 1865 aa19.57■□□□□ 0.72
TGFB1-202ENST00000597453 GMPSP49915 693 aaPredicted RBP19.57■□□□□ 0.72
TGFB1-202ENST00000597453 FMR1Q06787 632 aaKnown RBP eCLIP19.57■□□□□ 0.72
TGFB1-202ENST00000597453 USP50Q70EL3 339 aaPredicted RBP19.57■□□□□ 0.72
TGFB1-202ENST00000597453 ZBTB38Q8NAP3 1195 aaPredicted RBP19.57■□□□□ 0.72
TGFB1-202ENST00000597453 YDJCA8MPS7 323 aa19.56■□□□□ 0.72
TGFB1-202ENST00000597453 RAD17O75943 681 aa19.56■□□□□ 0.72
TGFB1-202ENST00000597453 CCDC30Q5VVM6 783 aa19.56■□□□□ 0.72
TGFB1-202ENST00000597453 CIAPIN1Q6FI81 312 aa19.56■□□□□ 0.72
TGFB1-202ENST00000597453 VEGFBP49765 207 aa19.55■□□□□ 0.72
TGFB1-202ENST00000597453 GPSM2P81274 684 aa19.55■□□□□ 0.72
TGFB1-202ENST00000597453 JARID2Q92833 1246 aaPredicted RBP19.55■□□□□ 0.72
TGFB1-202ENST00000597453 ADARB2Q9NS39 739 aaKnown RBP19.55■□□□□ 0.72
TGFB1-202ENST00000597453 NSFL1CQ9UNZ2 370 aaKnown RBP19.55■□□□□ 0.72
TGFB1-202ENST00000597453 CCDC27Q2M243 656 aa19.54■□□□□ 0.72
TGFB1-202ENST00000597453 WWC1Q8IX03 1113 aa19.54■□□□□ 0.72
TGFB1-202ENST00000597453 CCDC191Q8NCU4 936 aa19.54■□□□□ 0.72
TGFB1-202ENST00000597453 METTL22Q9BUU2 404 aaPredicted RBP19.54■□□□□ 0.72
TGFB1-202ENST00000597453 MRS2Q9HD23 443 aa19.54■□□□□ 0.72
TGFB1-202ENST00000597453 SEC31BQ9NQW1 1179 aa19.54■□□□□ 0.72
TGFB1-202ENST00000597453 POLLQ9UGP5 575 aa19.54■□□□□ 0.72
TGFB1-202ENST00000597453 TRAF5O00463 557 aa19.53■□□□□ 0.72
TGFB1-202ENST00000597453 PCCAP05165 728 aaPredicted RBP19.53■□□□□ 0.72
TGFB1-202ENST00000597453 CWC25Q9NXE8 425 aaPredicted RBP19.53■□□□□ 0.72
TGFB1-202ENST00000597453 SHTN1A0MZ66 631 aa19.52■□□□□ 0.72
TGFB1-202ENST00000597453 RASSF10A6NK89 507 aa19.52■□□□□ 0.72
TGFB1-202ENST00000597453 RIMBP2O15034 1052 aa19.52■□□□□ 0.72
TGFB1-202ENST00000597453 DDX58O95786 925 aaKnown RBP19.52■□□□□ 0.72
TGFB1-202ENST00000597453 RPS8P62241 208 aaKnown RBP19.52■□□□□ 0.72
TGFB1-202ENST00000597453 TNIP1Q15025 636 aa19.52■□□□□ 0.72
TGFB1-202ENST00000597453 WASHC4Q2M389 1173 aa19.52■□□□□ 0.72
TGFB1-202ENST00000597453 GPR101Q96P66 508 aaPredicted RBP19.52■□□□□ 0.72
TGFB1-202ENST00000597453 BCL2L13Q9BXK5 485 aa19.52■□□□□ 0.72
TGFB1-202ENST00000597453 DBNDD1Q9H9R9 158 aa19.52■□□□□ 0.72
TGFB1-202ENST00000597453 MAP3K2Q9Y2U5 619 aa19.52■□□□□ 0.72
TGFB1-202ENST00000597453 SCN9AQ15858 1988 aa19.52■□□□□ 0.71
TGFB1-202ENST00000597453 CDHR2Q9BYE9 1310 aa19.51■□□□□ 0.71
TGFB1-202ENST00000597453 MYH3P11055 1940 aa19.51■□□□□ 0.71
TGFB1-202ENST00000597453 C6orf229H3BNL8 230 aa19.51■□□□□ 0.71
TGFB1-202ENST00000597453 CCDC85AQ96PX6 553 aaPredicted RBP19.51■□□□□ 0.71
TGFB1-202ENST00000597453 ABT1Q9ULW3 272 aaKnown RBP19.51■□□□□ 0.71
TGFB1-202ENST00000597453 PI4KAP2A4QPH2 592 aa19.5■□□□□ 0.71
TGFB1-202ENST00000597453 PDE8AO60658 829 aa19.5■□□□□ 0.71
TGFB1-202ENST00000597453 IGKV5-2P06315 115 aa19.5■□□□□ 0.71
TGFB1-202ENST00000597453 HIRAP54198 1017 aaPredicted RBP19.5■□□□□ 0.71
TGFB1-202ENST00000597453 DEFB115Q30KQ5 88 aa19.5■□□□□ 0.71
TGFB1-202ENST00000597453 KSR2Q6VAB6 950 aa19.5■□□□□ 0.71
TGFB1-202ENST00000597453 TNS4Q8IZW8 715 aa19.5■□□□□ 0.71
TGFB1-202ENST00000597453 PI4KAP1Q8N8J0 262 aa19.5■□□□□ 0.71
TGFB1-202ENST00000597453 TBC1D16Q8TBP0 767 aa19.5■□□□□ 0.71
TGFB1-202ENST00000597453 TRPM4Q8TD43 1214 aa19.5■□□□□ 0.71
TGFB1-202ENST00000597453 CHMP4AQ9BY43 222 aa19.5■□□□□ 0.71
TGFB1-202ENST00000597453 ZBTB12Q9Y330 459 aaPredicted RBP19.5■□□□□ 0.71
TGFB1-202ENST00000597453 SPEF2Q9C093 1822 aa19.5■□□□□ 0.71
TGFB1-202ENST00000597453 FOXN1O15353 648 aa19.49■□□□□ 0.71
TGFB1-202ENST00000597453 DOK7Q18PE1 504 aa19.49■□□□□ 0.71
TGFB1-202ENST00000597453 TWISTNBQ3B726 338 aaPredicted RBP19.49■□□□□ 0.71
TGFB1-202ENST00000597453 CCDC152Q4G0S7 254 aa19.49■□□□□ 0.71
TGFB1-202ENST00000597453 CST9Q5W186 159 aa19.49■□□□□ 0.71
TGFB1-202ENST00000597453 G2E3Q7L622 706 aa19.49■□□□□ 0.71
TGFB1-202ENST00000597453 CNOT7Q9UIV1 285 aaKnown RBP19.49■□□□□ 0.71
TGFB1-202ENST00000597453 IL16Q14005 1332 aa19.49■□□□□ 0.71
TGFB1-202ENST00000597453 RTL9Q8NET4 1388 aa19.48■□□□□ 0.71
TGFB1-202ENST00000597453 THSD7BQ9C0I4 1608 aa19.48■□□□□ 0.71
TGFB1-202ENST00000597453 PSMD14O00487 310 aa19.48■□□□□ 0.71
TGFB1-202ENST00000597453 HSP90B1P14625 803 aaKnown RBP19.48■□□□□ 0.71
TGFB1-202ENST00000597453 STK31Q9BXU1 1019 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms