RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 ARHGAP45Q92619 1136 aa24.86■■□□□ 1.57
SHKBP1-214ENST00000597396 GRM8O00222 908 aa24.85■■□□□ 1.57
SHKBP1-214ENST00000597396 SBF1O95248 1867 aa24.85■■□□□ 1.57
SHKBP1-214ENST00000597396 ABCC4O15439 1325 aa24.85■■□□□ 1.57
SHKBP1-214ENST00000597396 CCDC152Q4G0S7 254 aa24.84■■□□□ 1.57
SHKBP1-214ENST00000597396 SOGA3Q5TF21 947 aa24.84■■□□□ 1.57
SHKBP1-214ENST00000597396 CCT4P50991 539 aaKnown RBP24.83■■□□□ 1.57
SHKBP1-214ENST00000597396 CASP7P55210 303 aa24.83■■□□□ 1.57
SHKBP1-214ENST00000597396 CTSWP56202 376 aa24.83■■□□□ 1.57
SHKBP1-214ENST00000597396 SPEF2Q9C093 1822 aa24.83■■□□□ 1.57
SHKBP1-214ENST00000597396 PPEF1O14829 653 aaPredicted RBP24.82■■□□□ 1.56
SHKBP1-214ENST00000597396 GRAPQ13588 217 aa24.82■■□□□ 1.56
SHKBP1-214ENST00000597396 ZKSCAN2Q63HK3 967 aa24.82■■□□□ 1.56
SHKBP1-214ENST00000597396 ATF7IPQ6VMQ6 1270 aa24.82■■□□□ 1.56
SHKBP1-214ENST00000597396 GRAPLQ8TC17 118 aaPredicted RBP24.82■■□□□ 1.56
SHKBP1-214ENST00000597396 CCDC85AQ96PX6 553 aaPredicted RBP24.82■■□□□ 1.56
SHKBP1-214ENST00000597396 PLA2G12BQ9BX93 195 aa24.82■■□□□ 1.56
SHKBP1-214ENST00000597396 CCDC93Q567U6 631 aa24.81■■□□□ 1.56
SHKBP1-214ENST00000597396 TRIM27P14373 513 aa24.8■■□□□ 1.56
SHKBP1-214ENST00000597396 C7orf43Q8WVR3 580 aa24.8■■□□□ 1.56
SHKBP1-214ENST00000597396 TMX4Q9H1E5 349 aaPredicted RBP24.8■■□□□ 1.56
SHKBP1-214ENST00000597396 RCAN3Q9UKA8 241 aa24.8■■□□□ 1.56
SHKBP1-214ENST00000597396 BBOX1O75936 387 aa24.79■■□□□ 1.56
SHKBP1-214ENST00000597396 TTLL11Q8NHH1 800 aa24.79■■□□□ 1.56
SHKBP1-214ENST00000597396 RASSF7Q02833 373 aa24.78■■□□□ 1.56
SHKBP1-214ENST00000597396 CC2D2BQ6DHV5 1058 aa24.78■■□□□ 1.56
SHKBP1-214ENST00000597396 OLFM4Q6UX06 510 aa24.78■■□□□ 1.56
SHKBP1-214ENST00000597396 CLUAP1Q96AJ1 413 aa24.78■■□□□ 1.56
SHKBP1-214ENST00000597396 SEC31BQ9NQW1 1179 aa24.78■■□□□ 1.56
SHKBP1-214ENST00000597396 TNNQ9UQP3 1299 aa24.78■■□□□ 1.56
SHKBP1-214ENST00000597396 DICER1Q9UPY3 1922 aaKnown RBP24.77■■□□□ 1.56
SHKBP1-214ENST00000597396 NBPF7P0C2Y1 421 aaPredicted RBP24.77■■□□□ 1.56
SHKBP1-214ENST00000597396 CELF1Q92879 486 aaKnown RBP24.77■■□□□ 1.56
SHKBP1-214ENST00000597396 UTYO14607 1347 aa24.77■■□□□ 1.56
SHKBP1-214ENST00000597396 COL4A1P02462 1669 aa24.76■■□□□ 1.55
SHKBP1-214ENST00000597396 LRRC37AA6NMS7 1700 aa24.76■■□□□ 1.55
SHKBP1-214ENST00000597396 TMC4Q7Z404 712 aa24.76■■□□□ 1.55
SHKBP1-214ENST00000597396 RTKN2Q8IZC4 609 aa24.76■■□□□ 1.55
SHKBP1-214ENST00000597396 GREM2Q9H772 168 aa24.76■■□□□ 1.55
SHKBP1-214ENST00000597396 CHMP3Q9Y3E7 222 aa24.76■■□□□ 1.55
SHKBP1-214ENST00000597396 ATP6V0A2Q9Y487 856 aa24.76■■□□□ 1.55
SHKBP1-214ENST00000597396 NFKBIEO00221 500 aa24.75■■□□□ 1.55
SHKBP1-214ENST00000597396 RPS8P62241 208 aaKnown RBP24.75■■□□□ 1.55
SHKBP1-214ENST00000597396 INTS3Q68E01 1043 aaKnown RBP24.75■■□□□ 1.55
SHKBP1-214ENST00000597396 FTSJ3Q8IY81 847 aaKnown RBP24.75■■□□□ 1.55
SHKBP1-214ENST00000597396 SUCLG2Q96I99 432 aa24.75■■□□□ 1.55
SHKBP1-214ENST00000597396 CDC5LQ99459 802 aaKnown RBP24.75■■□□□ 1.55
SHKBP1-214ENST00000597396 USP44Q9H0E7 712 aa24.75■■□□□ 1.55
SHKBP1-214ENST00000597396 TAOK3Q9H2K8 898 aa24.75■■□□□ 1.55
SHKBP1-214ENST00000597396 RTL9Q8NET4 1388 aa24.75■■□□□ 1.55
SHKBP1-214ENST00000597396 FOXO4P98177 505 aa24.74■■□□□ 1.55
SHKBP1-214ENST00000597396 SP8Q8IXZ3 490 aa24.74■■□□□ 1.55
SHKBP1-214ENST00000597396 LTBP3Q9NS15 1303 aa24.73■■□□□ 1.55
SHKBP1-214ENST00000597396 CSF1RP07333 972 aa24.73■■□□□ 1.55
SHKBP1-214ENST00000597396 FAM161AQ3B820 660 aa24.73■■□□□ 1.55
SHKBP1-214ENST00000597396 GRIPAP1Q4V328 841 aa24.73■■□□□ 1.55
SHKBP1-214ENST00000597396 ANKRD18AQ8IVF6 992 aa24.73■■□□□ 1.55
SHKBP1-214ENST00000597396 FKBP4Q02790 459 aaKnown RBP eCLIP24.72■■□□□ 1.55
SHKBP1-214ENST00000597396 EPHA10Q5JZY3 1008 aa24.72■■□□□ 1.55
SHKBP1-214ENST00000597396 LMBR1LQ6UX01 489 aa24.72■■□□□ 1.55
SHKBP1-214ENST00000597396 DZIP1LQ8IYY4 767 aaKnown RBP24.72■■□□□ 1.55
SHKBP1-214ENST00000597396 RNF181Q9P0P0 153 aa24.72■■□□□ 1.55
SHKBP1-214ENST00000597396 TIAM2Q8IVF5 1701 aa24.72■■□□□ 1.55
SHKBP1-214ENST00000597396 UBTFL1P0CB47 393 aaPredicted RBP24.71■■□□□ 1.55
SHKBP1-214ENST00000597396 LMNB1P20700 586 aa24.71■■□□□ 1.55
SHKBP1-214ENST00000597396 ITGA6P23229 1130 aa24.71■■□□□ 1.55
SHKBP1-214ENST00000597396 C9orf131Q5VYM1 1079 aa24.71■■□□□ 1.55
SHKBP1-214ENST00000597396 SLC51AQ86UW1 340 aa24.71■■□□□ 1.55
SHKBP1-214ENST00000597396 ANKRD18BA2A2Z9 1011 aa24.7■■□□□ 1.54
SHKBP1-214ENST00000597396 KIF3CO14782 793 aa24.7■■□□□ 1.54
SHKBP1-214ENST00000597396 TMEM57Q8N5G2 664 aa24.7■■□□□ 1.54
SHKBP1-214ENST00000597396 SNED1Q8TER0 1413 aa24.69■■□□□ 1.54
SHKBP1-214ENST00000597396 MS4A1P11836 297 aa24.69■■□□□ 1.54
SHKBP1-214ENST00000597396 IGHMBP2P38935 993 aaKnown RBP24.69■■□□□ 1.54
SHKBP1-214ENST00000597396 IFIT5Q13325 482 aaKnown RBP24.69■■□□□ 1.54
SHKBP1-214ENST00000597396 MPNDQ8N594 471 aa24.69■■□□□ 1.54
SHKBP1-214ENST00000597396 KAZALD1Q96I82 304 aa24.69■■□□□ 1.54
SHKBP1-214ENST00000597396 BICC1Q9H694 974 aaKnown RBP24.69■■□□□ 1.54
SHKBP1-214ENST00000597396 HDAC5Q9UQL6 1122 aa24.69■■□□□ 1.54
SHKBP1-214ENST00000597396 DPP8Q6V1X1 898 aaPredicted RBP24.68■■□□□ 1.54
SHKBP1-214ENST00000597396 PSMD1Q99460 953 aa24.68■■□□□ 1.54
SHKBP1-214ENST00000597396 MEIS3Q99687 375 aa24.68■■□□□ 1.54
SHKBP1-214ENST00000597396 GNAI3P08754 354 aa24.67■■□□□ 1.54
SHKBP1-214ENST00000597396 HSPA6P17066 643 aa24.67■■□□□ 1.54
SHKBP1-214ENST00000597396 PRELPP51888 382 aa24.67■■□□□ 1.54
SHKBP1-214ENST00000597396 CCDC57Q2TAC2 916 aa24.67■■□□□ 1.54
SHKBP1-214ENST00000597396 TAF7LQ5H9L4 462 aa24.67■■□□□ 1.54
SHKBP1-214ENST00000597396 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.67■■□□□ 1.54
SHKBP1-214ENST00000597396 ZNF277Q9NRM2 450 aaPredicted RBP24.67■■□□□ 1.54
SHKBP1-214ENST00000597396 ITPRIPQ8IWB1 547 aa24.66■■□□□ 1.54
SHKBP1-214ENST00000597396 MPHOSPH8Q99549 860 aa24.66■■□□□ 1.54
SHKBP1-214ENST00000597396 RLBP1P12271 317 aa24.65■■□□□ 1.54
SHKBP1-214ENST00000597396 RABL6Q3YEC7 729 aaPredicted RBP24.65■■□□□ 1.54
SHKBP1-214ENST00000597396 ANKRD44Q8N8A2 993 aa24.65■■□□□ 1.54
SHKBP1-214ENST00000597396 SUPT20HQ8NEM7 779 aa24.65■■□□□ 1.54
SHKBP1-214ENST00000597396 BSDC1Q9NW68 430 aaPredicted RBP24.65■■□□□ 1.54
SHKBP1-214ENST00000597396 NSFL1CQ9UNZ2 370 aaKnown RBP24.65■■□□□ 1.54
SHKBP1-214ENST00000597396 LTBP1Q14766 1721 aa24.64■■□□□ 1.54
SHKBP1-214ENST00000597396 PLIN1O60240 522 aa24.64■■□□□ 1.54
SHKBP1-214ENST00000597396 IARSP41252 1262 aaKnown RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms