RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 LBX1P52954 281 aa13.78□□□□□ -0.2
CHMP2A-202ENST00000596708 CXCL9Q07325 125 aa13.78□□□□□ -0.2
CHMP2A-202ENST00000596708 GRM1Q13255 1194 aa13.78□□□□□ -0.2
CHMP2A-202ENST00000596708 RUNDC1Q96C34 613 aa13.78□□□□□ -0.2
CHMP2A-202ENST00000596708 BCL2L13Q9BXK5 485 aa13.78□□□□□ -0.2
CHMP2A-202ENST00000596708 ADARB2Q9NS39 739 aaKnown RBP13.78□□□□□ -0.2
CHMP2A-202ENST00000596708 GPRC5DQ9NZD1 345 aa13.78□□□□□ -0.2
CHMP2A-202ENST00000596708 MYBBP1AQ9BQG0 1328 aaKnown RBP13.78□□□□□ -0.2
CHMP2A-202ENST00000596708 MAP2K1Q02750 393 aaPredicted RBP13.77□□□□□ -0.21
CHMP2A-202ENST00000596708 GRAPQ13588 217 aa13.77□□□□□ -0.21
CHMP2A-202ENST00000596708 CIAPIN1Q6FI81 312 aa13.77□□□□□ -0.21
CHMP2A-202ENST00000596708 GRAPLQ8TC17 118 aaPredicted RBP13.77□□□□□ -0.21
CHMP2A-202ENST00000596708 RTFDC1Q9BY42 306 aaPredicted RBP13.77□□□□□ -0.21
CHMP2A-202ENST00000596708 CHPF2Q9P2E5 772 aa13.77□□□□□ -0.21
CHMP2A-202ENST00000596708 TRAF5O00463 557 aa13.76□□□□□ -0.21
CHMP2A-202ENST00000596708 ECE1P42892 770 aa13.76□□□□□ -0.21
CHMP2A-202ENST00000596708 GMPSP49915 693 aaPredicted RBP13.76□□□□□ -0.21
CHMP2A-202ENST00000596708 TNIP1Q15025 636 aa13.76□□□□□ -0.21
CHMP2A-202ENST00000596708 HDGFL1Q5TGJ6 251 aa13.76□□□□□ -0.21
CHMP2A-202ENST00000596708 PLBD2Q8NHP8 589 aa13.76□□□□□ -0.21
CHMP2A-202ENST00000596708 TRIM35Q9UPQ4 493 aa13.76□□□□□ -0.21
CHMP2A-202ENST00000596708 CASP8AP2Q9UKL3 1982 aa13.75□□□□□ -0.21
CHMP2A-202ENST00000596708 RAD17O75943 681 aa13.75□□□□□ -0.21
CHMP2A-202ENST00000596708 KIAA2012Q0VF49 1180 aa13.75□□□□□ -0.21
CHMP2A-202ENST00000596708 ANKRD13DQ6ZTN6 518 aa13.75□□□□□ -0.21
CHMP2A-202ENST00000596708 CAPNS2Q96L46 248 aa13.75□□□□□ -0.21
CHMP2A-202ENST00000596708 ATP5J2-PTCD1G3V325 749 aa13.74□□□□□ -0.21
CHMP2A-202ENST00000596708 HSPA8P11142 646 aaKnown RBP13.74□□□□□ -0.21
CHMP2A-202ENST00000596708 CST9Q5W186 159 aa13.74□□□□□ -0.21
CHMP2A-202ENST00000596708 CYP4F22Q6NT55 531 aa13.74□□□□□ -0.21
CHMP2A-202ENST00000596708 TMC4Q7Z404 712 aa13.74□□□□□ -0.21
CHMP2A-202ENST00000596708 FAM89AQ96GI7 184 aa13.74□□□□□ -0.21
CHMP2A-202ENST00000596708 BEGAINQ9BUH8 593 aa13.74□□□□□ -0.21
CHMP2A-202ENST00000596708 DBF4Q9UBU7 674 aaPredicted RBP13.74□□□□□ -0.21
CHMP2A-202ENST00000596708 ADAMTS8Q9UP79 889 aa13.74□□□□□ -0.21
CHMP2A-202ENST00000596708 LRRC37AA6NMS7 1700 aa13.73□□□□□ -0.21
CHMP2A-202ENST00000596708 HOXB7P09629 217 aa13.73□□□□□ -0.21
CHMP2A-202ENST00000596708 RTL5Q5HYW3 569 aaPredicted RBP13.73□□□□□ -0.21
CHMP2A-202ENST00000596708 GPR101Q96P66 508 aaPredicted RBP13.73□□□□□ -0.21
CHMP2A-202ENST00000596708 GLIS2Q9BZE0 524 aaPredicted RBP13.73□□□□□ -0.21
CHMP2A-202ENST00000596708 CNOT7Q9UIV1 285 aaKnown RBP13.73□□□□□ -0.21
CHMP2A-202ENST00000596708 NSFL1CQ9UNZ2 370 aaKnown RBP13.73□□□□□ -0.21
CHMP2A-202ENST00000596708 TLL2Q9Y6L7 1015 aa13.73□□□□□ -0.21
CHMP2A-202ENST00000596708 H7C1D1 291 aa13.72□□□□□ -0.21
CHMP2A-202ENST00000596708 RIMBP2O15034 1052 aa13.72□□□□□ -0.21
CHMP2A-202ENST00000596708 CELF2O95319 508 aaKnown RBP13.72□□□□□ -0.21
CHMP2A-202ENST00000596708 WASHC4Q2M389 1173 aa13.72□□□□□ -0.21
CHMP2A-202ENST00000596708 DUSP27Q5VZP5 1158 aa13.72□□□□□ -0.21
CHMP2A-202ENST00000596708 CELF1Q92879 486 aaKnown RBP13.72□□□□□ -0.21
CHMP2A-202ENST00000596708 CFAP44Q96MT7 982 aa13.72□□□□□ -0.21
CHMP2A-202ENST00000596708 ISCA1Q9BUE6 129 aa13.72□□□□□ -0.21
CHMP2A-202ENST00000596708 ZNF408Q9H9D4 720 aa13.72□□□□□ -0.21
CHMP2A-202ENST00000596708 HYPKQ9NX55 129 aa13.72□□□□□ -0.21
CHMP2A-202ENST00000596708 CDHR2Q9BYE9 1310 aa13.71□□□□□ -0.21
CHMP2A-202ENST00000596708 YDJCA8MPS7 323 aa13.71□□□□□ -0.21
CHMP2A-202ENST00000596708 C6orf229H3BNL8 230 aa13.71□□□□□ -0.21
CHMP2A-202ENST00000596708 SF3B3Q15393 1217 aaKnown RBP13.71□□□□□ -0.21
CHMP2A-202ENST00000596708 RIC3Q7Z5B4 369 aa13.71□□□□□ -0.21
CHMP2A-202ENST00000596708 DBNDD1Q9H9R9 158 aa13.71□□□□□ -0.21
CHMP2A-202ENST00000596708 DUOX1Q9NRD9 1551 aa13.71□□□□□ -0.22
CHMP2A-202ENST00000596708 IRS4O14654 1257 aaPredicted RBP13.7□□□□□ -0.22
CHMP2A-202ENST00000596708 AOC2O75106 756 aa13.7□□□□□ -0.22
CHMP2A-202ENST00000596708 HIRAP54198 1017 aaPredicted RBP13.7□□□□□ -0.22
CHMP2A-202ENST00000596708 CDC37L1Q7L3B6 337 aa13.7□□□□□ -0.22
CHMP2A-202ENST00000596708 MICALL2Q8IY33 904 aa13.7□□□□□ -0.22
CHMP2A-202ENST00000596708 TRPM4Q8TD43 1214 aa13.7□□□□□ -0.22
CHMP2A-202ENST00000596708 ZC3H15Q8WU90 426 aaKnown RBP13.7□□□□□ -0.22
CHMP2A-202ENST00000596708 MBIPQ9NS73 344 aa13.7□□□□□ -0.22
CHMP2A-202ENST00000596708 PGAP2Q9UHJ9 254 aa13.7□□□□□ -0.22
CHMP2A-202ENST00000596708 ZBTB12Q9Y330 459 aaPredicted RBP13.7□□□□□ -0.22
CHMP2A-202ENST00000596708 THSD7BQ9C0I4 1608 aa13.7□□□□□ -0.22
CHMP2A-202ENST00000596708 AKAP11Q9UKA4 1901 aa13.7□□□□□ -0.22
CHMP2A-202ENST00000596708 SCN9AQ15858 1988 aa13.69□□□□□ -0.22
CHMP2A-202ENST00000596708 MYH3P11055 1940 aa13.69□□□□□ -0.22
CHMP2A-202ENST00000596708 SHTN1A0MZ66 631 aa13.69□□□□□ -0.22
CHMP2A-202ENST00000596708 ELL2O00472 640 aaPredicted RBP13.69□□□□□ -0.22
CHMP2A-202ENST00000596708 PSMD14O00487 310 aa13.69□□□□□ -0.22
CHMP2A-202ENST00000596708 MAP2K2P36507 400 aa13.69□□□□□ -0.22
CHMP2A-202ENST00000596708 GPSM2P81274 684 aa13.69□□□□□ -0.22
CHMP2A-202ENST00000596708 GOLGA2Q08379 1002 aa13.69□□□□□ -0.22
CHMP2A-202ENST00000596708 SAPCD2Q86UD0 394 aa13.69□□□□□ -0.22
CHMP2A-202ENST00000596708 EYA3Q99504 573 aa13.69□□□□□ -0.22
CHMP2A-202ENST00000596708 G3V3G9 751 aa13.68□□□□□ -0.22
CHMP2A-202ENST00000596708 RPS8P62241 208 aaKnown RBP13.68□□□□□ -0.22
CHMP2A-202ENST00000596708 TRIM28Q13263 835 aaKnown RBP13.68□□□□□ -0.22
CHMP2A-202ENST00000596708 DOK7Q18PE1 504 aa13.68□□□□□ -0.22
CHMP2A-202ENST00000596708 DCAF8Q5TAQ9 597 aa13.68□□□□□ -0.22
CHMP2A-202ENST00000596708 SAMD7Q7Z3H4 446 aa13.68□□□□□ -0.22
CHMP2A-202ENST00000596708 USP48Q86UV5 1035 aa13.68□□□□□ -0.22
CHMP2A-202ENST00000596708 DPF2Q92785 391 aa13.68□□□□□ -0.22
CHMP2A-202ENST00000596708 PHAXQ9H814 394 aaKnown RBP13.68□□□□□ -0.22
CHMP2A-202ENST00000596708 POLLQ9UGP5 575 aa13.68□□□□□ -0.22
CHMP2A-202ENST00000596708 TSKSQ9UJT2 592 aa13.68□□□□□ -0.22
CHMP2A-202ENST00000596708 SPEF2Q9C093 1822 aa13.67□□□□□ -0.22
CHMP2A-202ENST00000596708 COL4A1P02462 1669 aa13.67□□□□□ -0.22
CHMP2A-202ENST00000596708 APAF1O14727 1248 aa13.67□□□□□ -0.22
CHMP2A-202ENST00000596708 ECE2O60344 883 aa13.67□□□□□ -0.22
CHMP2A-202ENST00000596708 GNAI1P63096 354 aa13.67□□□□□ -0.22
CHMP2A-202ENST00000596708 TBC1D10BQ4KMP7 808 aaPredicted RBP13.67□□□□□ -0.22
CHMP2A-202ENST00000596708 RBM26Q5T8P6 1007 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms