RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 MAP1SQ66K74 1059 aaPredicted RBP23.78■■□□□ 1.4
CIRBP-237ENST00000592234 MPNDQ8N594 471 aa23.78■■□□□ 1.4
CIRBP-237ENST00000592234 CNTROBQ8N137 903 aa23.77■■□□□ 1.4
CIRBP-237ENST00000592234 RTFDC1Q9BY42 306 aaPredicted RBP23.77■■□□□ 1.4
CIRBP-237ENST00000592234 TMEM88BA6NKF7 163 aa23.76■■□□□ 1.39
CIRBP-237ENST00000592234 ELL2O00472 640 aaPredicted RBP23.76■■□□□ 1.39
CIRBP-237ENST00000592234 SCNN1DP51172 638 aa23.76■■□□□ 1.39
CIRBP-237ENST00000592234 COL13A1Q5TAT6 717 aaPredicted RBP23.76■■□□□ 1.39
CIRBP-237ENST00000592234 FAM89AQ96GI7 184 aa23.76■■□□□ 1.39
CIRBP-237ENST00000592234 EPS15P42566 896 aa23.75■■□□□ 1.39
CIRBP-237ENST00000592234 TMC4Q7Z404 712 aa23.75■■□□□ 1.39
CIRBP-237ENST00000592234 RIC3Q7Z5B4 369 aa23.75■■□□□ 1.39
CIRBP-237ENST00000592234 ZNRF3Q9ULT6 936 aa23.75■■□□□ 1.39
CIRBP-237ENST00000592234 LRRC37AA6NMS7 1700 aa23.75■■□□□ 1.39
CIRBP-237ENST00000592234 CNTNAP1P78357 1384 aa23.75■■□□□ 1.39
CIRBP-237ENST00000592234 GOLGA2Q08379 1002 aa23.74■■□□□ 1.39
CIRBP-237ENST00000592234 RTL5Q5HYW3 569 aaPredicted RBP23.74■■□□□ 1.39
CIRBP-237ENST00000592234 PHAXQ9H814 394 aaKnown RBP23.73■■□□□ 1.39
CIRBP-237ENST00000592234 CXCL9Q07325 125 aa23.72■■□□□ 1.39
CIRBP-237ENST00000592234 KIAA2012Q0VF49 1180 aa23.72■■□□□ 1.39
CIRBP-237ENST00000592234 TRIM28Q13263 835 aaKnown RBP23.72■■□□□ 1.39
CIRBP-237ENST00000592234 SF3B3Q15393 1217 aaKnown RBP23.72■■□□□ 1.39
CIRBP-237ENST00000592234 USP50Q70EL3 339 aaPredicted RBP23.71■■□□□ 1.39
CIRBP-237ENST00000592234 TRPM7Q96QT4 1865 aa23.7■■□□□ 1.39
CIRBP-237ENST00000592234 DUOX1Q9NRD9 1551 aa23.7■■□□□ 1.38
CIRBP-237ENST00000592234 IRS4O14654 1257 aaPredicted RBP23.7■■□□□ 1.38
CIRBP-237ENST00000592234 CCDC184Q52MB2 194 aa23.7■■□□□ 1.38
CIRBP-237ENST00000592234 C8orf58Q8NAV2 365 aa23.7■■□□□ 1.38
CIRBP-237ENST00000592234 CELF1Q92879 486 aaKnown RBP23.7■■□□□ 1.38
CIRBP-237ENST00000592234 GPRC5DQ9NZD1 345 aa23.7■■□□□ 1.38
CIRBP-237ENST00000592234 CIAPIN1Q6FI81 312 aa23.69■■□□□ 1.38
CIRBP-237ENST00000592234 MYD88Q99836 296 aa23.69■■□□□ 1.38
CIRBP-237ENST00000592234 CHMP4AQ9BY43 222 aa23.69■■□□□ 1.38
CIRBP-237ENST00000592234 CCDC30Q5VVM6 783 aa23.68■■□□□ 1.38
CIRBP-237ENST00000592234 ADARB2Q9NS39 739 aaKnown RBP23.68■■□□□ 1.38
CIRBP-237ENST00000592234 RAD17O75943 681 aa23.67■■□□□ 1.38
CIRBP-237ENST00000592234 VEGFBP49765 207 aa23.67■■□□□ 1.38
CIRBP-237ENST00000592234 GMPSP49915 693 aaPredicted RBP23.67■■□□□ 1.38
CIRBP-237ENST00000592234 TNIP1Q15025 636 aa23.67■■□□□ 1.38
CIRBP-237ENST00000592234 ZBTB38Q8NAP3 1195 aaPredicted RBP23.67■■□□□ 1.38
CIRBP-237ENST00000592234 BCL2L13Q9BXK5 485 aa23.67■■□□□ 1.38
CIRBP-237ENST00000592234 NSFL1CQ9UNZ2 370 aaKnown RBP23.67■■□□□ 1.38
CIRBP-237ENST00000592234 COL4A1P02462 1669 aa23.67■■□□□ 1.38
CIRBP-237ENST00000592234 DDX58O95786 925 aaKnown RBP23.66■■□□□ 1.38
CIRBP-237ENST00000592234 HSP90B1P14625 803 aaKnown RBP23.66■■□□□ 1.38
CIRBP-237ENST00000592234 TNS4Q8IZW8 715 aa23.66■■□□□ 1.38
CIRBP-237ENST00000592234 ABT1Q9ULW3 272 aaKnown RBP23.66■■□□□ 1.38
CIRBP-237ENST00000592234 WASHC4Q2M389 1173 aa23.65■■□□□ 1.38
CIRBP-237ENST00000592234 DEFB115Q30KQ5 88 aa23.65■■□□□ 1.38
CIRBP-237ENST00000592234 CCDC191Q8NCU4 936 aa23.65■■□□□ 1.38
CIRBP-237ENST00000592234 CDHR2Q9BYE9 1310 aa23.64■■□□□ 1.38
CIRBP-237ENST00000592234 RASSF10A6NK89 507 aa23.64■■□□□ 1.37
CIRBP-237ENST00000592234 YDJCA8MPS7 323 aa23.64■■□□□ 1.37
CIRBP-237ENST00000592234 RPS8P62241 208 aaKnown RBP23.64■■□□□ 1.37
CIRBP-237ENST00000592234 TSPYL6Q8N831 410 aa23.64■■□□□ 1.37
CIRBP-237ENST00000592234 C6orf229H3BNL8 230 aa23.63■■□□□ 1.37
CIRBP-237ENST00000592234 ANP32CO43423 234 aa23.63■■□□□ 1.37
CIRBP-237ENST00000592234 GPSM2P81274 684 aa23.63■■□□□ 1.37
CIRBP-237ENST00000592234 FMR1Q06787 632 aaKnown RBP eCLIP23.63■■□□□ 1.371e-8■□□□□ 9.5
CIRBP-237ENST00000592234 TSR2Q969E8 191 aaKnown RBP23.63■■□□□ 1.37
CIRBP-237ENST00000592234 METTL22Q9BUU2 404 aaPredicted RBP23.63■■□□□ 1.37
CIRBP-237ENST00000592234 CWC25Q9NXE8 425 aaPredicted RBP23.63■■□□□ 1.37
CIRBP-237ENST00000592234 RIMBP2O15034 1052 aa23.62■■□□□ 1.37
CIRBP-237ENST00000592234 PCCAP05165 728 aaPredicted RBP23.62■■□□□ 1.37
CIRBP-237ENST00000592234 CCDC27Q2M243 656 aa23.62■■□□□ 1.37
CIRBP-237ENST00000592234 POLLQ9UGP5 575 aa23.62■■□□□ 1.37
CIRBP-237ENST00000592234 EYA3Q99504 573 aa23.61■■□□□ 1.37
CIRBP-237ENST00000592234 DBNDD1Q9H9R9 158 aa23.61■■□□□ 1.37
CIRBP-237ENST00000592234 SEC31BQ9NQW1 1179 aa23.61■■□□□ 1.37
CIRBP-237ENST00000592234 MAP3K2Q9Y2U5 619 aa23.61■■□□□ 1.37
CIRBP-237ENST00000592234 MYH3P11055 1940 aa23.61■■□□□ 1.37
CIRBP-237ENST00000592234 TRAF5O00463 557 aa23.6■■□□□ 1.37
CIRBP-237ENST00000592234 FOXN1O15353 648 aa23.6■■□□□ 1.37
CIRBP-237ENST00000592234 PDE8AO60658 829 aa23.6■■□□□ 1.37
CIRBP-237ENST00000592234 CCDC152Q4G0S7 254 aa23.6■■□□□ 1.37
CIRBP-237ENST00000592234 WWC1Q8IX03 1113 aa23.6■■□□□ 1.37
CIRBP-237ENST00000592234 JARID2Q92833 1246 aaPredicted RBP23.6■■□□□ 1.37
CIRBP-237ENST00000592234 AIDAQ96BJ3 306 aa23.6■■□□□ 1.37
CIRBP-237ENST00000592234 STK31Q9BXU1 1019 aa23.6■■□□□ 1.37
CIRBP-237ENST00000592234 CNOT7Q9UIV1 285 aaKnown RBP23.6■■□□□ 1.37
CIRBP-237ENST00000592234 WDR33Q9C0J8 1336 aaKnown RBP23.59■■□□□ 1.37
CIRBP-237ENST00000592234 H7C1D1 291 aa23.58■■□□□ 1.37
CIRBP-237ENST00000592234 PSMD14O00487 310 aa23.58■■□□□ 1.37
CIRBP-237ENST00000592234 KSR2Q6VAB6 950 aa23.58■■□□□ 1.37
CIRBP-237ENST00000592234 TBC1D16Q8TBP0 767 aa23.58■■□□□ 1.37
CIRBP-237ENST00000592234 CCDC85AQ96PX6 553 aaPredicted RBP23.58■■□□□ 1.37
CIRBP-237ENST00000592234 MRS2Q9HD23 443 aa23.58■■□□□ 1.37
CIRBP-237ENST00000592234 PI4KAP2A4QPH2 592 aa23.57■■□□□ 1.36
CIRBP-237ENST00000592234 ECE2O60344 883 aa23.57■■□□□ 1.36
CIRBP-237ENST00000592234 TWISTNBQ3B726 338 aaPredicted RBP23.57■■□□□ 1.36
CIRBP-237ENST00000592234 CST9Q5W186 159 aa23.57■■□□□ 1.36
CIRBP-237ENST00000592234 PAXIP1Q6ZW49 1069 aaPredicted RBP23.57■■□□□ 1.36
CIRBP-237ENST00000592234 MICALL2Q8IY33 904 aa23.57■■□□□ 1.36
CIRBP-237ENST00000592234 PI4KAP1Q8N8J0 262 aa23.57■■□□□ 1.36
CIRBP-237ENST00000592234 TRPM4Q8TD43 1214 aa23.57■■□□□ 1.36
CIRBP-237ENST00000592234 GPR101Q96P66 508 aaPredicted RBP23.57■■□□□ 1.36
CIRBP-237ENST00000592234 ANKIB1Q9P2G1 1089 aa23.57■■□□□ 1.36
CIRBP-237ENST00000592234 ZBTB12Q9Y330 459 aaPredicted RBP23.57■■□□□ 1.36
CIRBP-237ENST00000592234 CACNA1FO60840 1977 aa23.57■■□□□ 1.36
CIRBP-237ENST00000592234 SHTN1A0MZ66 631 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms